Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10h22r
         (751 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q64R44 Cluster: Putative uncharacterized protein; n=2; ...    33   7.5  
UniRef50_Q8I3W3 Cluster: Putative uncharacterized protein PFE072...    33   7.5  

>UniRef50_Q64R44 Cluster: Putative uncharacterized protein; n=2;
           Bacteroides fragilis|Rep: Putative uncharacterized
           protein - Bacteroides fragilis
          Length = 443

 Score = 33.1 bits (72), Expect = 7.5
 Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
 Frame = +1

Query: 622 HICL*KLDK*FKKVSNLLREMNVCCAKT--KKKHIDYRAKSI 741
           H C  KL K  ++  NLL  +  CCAKT  KK+ I++  K+I
Sbjct: 275 HACFSKLQKEMEENPNLLYYLGRCCAKTSWKKEGIEHLEKAI 316


>UniRef50_Q8I3W3 Cluster: Putative uncharacterized protein PFE0725c;
           n=4; Plasmodium|Rep: Putative uncharacterized protein
           PFE0725c - Plasmodium falciparum (isolate 3D7)
          Length = 199

 Score = 33.1 bits (72), Expect = 7.5
 Identities = 18/54 (33%), Positives = 30/54 (55%)
 Frame = +1

Query: 100 SQHIIKINVTFKIKLKFTFLCGFRLSKLK*DTYLHFIHNLFKRP*NVKLHIYWN 261
           S  +IK+N  FK+ L+FTFL  F    +   T L+  +N+  +  +  ++IY N
Sbjct: 20  SSPLIKLNYLFKVILRFTFLVSFSFLAIIVST-LYVENNIINKRMHTHIYIYIN 72


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 596,247,998
Number of Sequences: 1657284
Number of extensions: 10545833
Number of successful extensions: 17421
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 16815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17418
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61734884250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)