Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10h22r
         (751 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   2.6  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   3.4  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   4.6  
AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical pro...    22   6.0  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   8.0  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   8.0  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   8.0  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   8.0  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 318 FILMYLIYLYETYYFTIS 265
           F+  Y IYL+  YY   S
Sbjct: 145 FVFCYFIYLFTVYYIYYS 162


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
 Frame = -3

Query: 329 FKLNLYLCT*FTY--TKLIILRFLKFQ*ICNLTFYGRLNKL*MKCKYVSYFNLDKRKPQR 156
           + L LY+     Y  TKL+++ FLKF  I  +  +G +  +   C  +S  NL +R P  
Sbjct: 270 YVLILYILESLLYMVTKLVVVTFLKF--IKKIQIFGIM--ITKAC--MSASNLIQRTP-- 321

Query: 155 NVNFNLILNV 126
           N+ + L+ N+
Sbjct: 322 NICYKLLSNL 331


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = -3

Query: 722 SICFFLVLAQHTFISRNKFETFLNYLSSFHKQICTINVTNKI 597
           SIC     +   F+ R+  E F NY+  F+ Q+    +T+ I
Sbjct: 134 SICVQTEKSVFDFLCRHTVEYFQNYIHFFY-QLLLYLITDMI 174


>AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical
           protein protein.
          Length = 86

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 342 KYFHPTSSEVVAYLFFNYLFY 404
           K+FHP +      + FNY +Y
Sbjct: 47  KHFHPLALSNKNAIDFNYYYY 67


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +1

Query: 679  EMNVCCAKTKKK 714
            E+N+CC K K++
Sbjct: 1361 ELNLCCTKKKEE 1372


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +1

Query: 679  EMNVCCAKTKKK 714
            E+N+CC K K++
Sbjct: 1361 ELNLCCTKKKEE 1372


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +1

Query: 679  EMNVCCAKTKKK 714
            E+N+CC K K++
Sbjct: 1361 ELNLCCTKKKEE 1372


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +1

Query: 679  EMNVCCAKTKKK 714
            E+N+CC K K++
Sbjct: 1361 ELNLCCTKKKEE 1372


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,289
Number of Sequences: 336
Number of extensions: 3448
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)