Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10h21f
(563 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014298-1339|ABC67180.1| 117|Drosophila melanogaster CG34026-P... 56 4e-08
AE013599-3573|AAM68241.1| 122|Drosophila melanogaster CG30413-P... 38 0.007
Y14277-1|CAA74654.1| 1116|Drosophila melanogaster nuclear protei... 30 1.9
AY061410-1|AAL28958.1| 1127|Drosophila melanogaster LD34181p pro... 30 1.9
AE014134-1198|AAF52463.2| 1127|Drosophila melanogaster CG3423-PA... 30 1.9
AF181635-1|AAD55421.1| 810|Drosophila melanogaster BcDNA.GH0671... 29 3.3
AE014298-570|AAN09111.1| 810|Drosophila melanogaster CG2930-PB,... 29 3.3
AE014298-569|AAF45901.2| 810|Drosophila melanogaster CG2930-PA,... 29 3.3
BT016007-1|AAV36892.1| 288|Drosophila melanogaster RE26656p pro... 28 7.6
AE014297-419|AAF51902.1| 288|Drosophila melanogaster CG1153-PA ... 28 7.6
>AE014298-1339|ABC67180.1| 117|Drosophila melanogaster CG34026-PA
protein.
Length = 117
Score = 55.6 bits (128), Expect = 4e-08
Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 4/116 (3%)
Frame = +3
Query: 69 FALVVLAATNAAILPSSTRANLIVGYVSTGDRLLYRSYVYQPARPNTIQYQDIVYRG--- 239
+ ++L A A ILP+ + + G V D L + V + +Q + V++
Sbjct: 3 YPTIILFALAAFILPTFAANDYLWGEVGADDYQLAKDTVSKAFFVGLVQTKKYVFKQSDN 62
Query: 240 -NATTRITAIQATEVGATQYASAWILSGGLSQNNVTVRFQSARGYGYYYLFDVWGR 404
NA T ITAI+ T+ + A+A ++SGG T++F S RGYG + ++WGR
Sbjct: 63 LNALT-ITAIKITDKKKSHGATAVLVSGGPGSKGATIKFTSERGYGIKDIVEIWGR 117
>AE013599-3573|AAM68241.1| 122|Drosophila melanogaster CG30413-PA
protein.
Length = 122
Score = 38.3 bits (85), Expect = 0.007
Identities = 22/56 (39%), Positives = 32/56 (57%)
Frame = +3
Query: 207 TIQYQDIVYRGNATTRITAIQATEVGATQYASAWILSGGLSQNNVTVRFQSARGYG 374
T + + G A T IT I+ T++ + A+A I SGG+ VT++F SARG G
Sbjct: 57 TTKTYTLTQAGTAKT-ITYIKITDLKKMRGATAEITSGGVGSTTVTIKFTSARGAG 111
>Y14277-1|CAA74654.1| 1116|Drosophila melanogaster nuclear protein
SA protein.
Length = 1116
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -2
Query: 508 KFINWSLYDKIVSCKYEC*VQYLDNFMKEELSKN*RPHTSK 386
K+I W+L+DKI + C L + K+EL TSK
Sbjct: 352 KYIGWTLHDKIGEVRLRCLQSLLPLYEKDELKGKLELFTSK 392
>AY061410-1|AAL28958.1| 1127|Drosophila melanogaster LD34181p
protein.
Length = 1127
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -2
Query: 508 KFINWSLYDKIVSCKYEC*VQYLDNFMKEELSKN*RPHTSK 386
K+I W+L+DKI + C L + K+EL TSK
Sbjct: 363 KYIGWTLHDKIGEVRLRCLQSLLPLYEKDELKGKLELFTSK 403
>AE014134-1198|AAF52463.2| 1127|Drosophila melanogaster CG3423-PA
protein.
Length = 1127
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -2
Query: 508 KFINWSLYDKIVSCKYEC*VQYLDNFMKEELSKN*RPHTSK 386
K+I W+L+DKI + C L + K+EL TSK
Sbjct: 363 KYIGWTLHDKIGEVRLRCLQSLLPLYEKDELKGKLELFTSK 403
>AF181635-1|AAD55421.1| 810|Drosophila melanogaster BcDNA.GH06717
protein.
Length = 810
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/73 (23%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Frame = +3
Query: 57 TILVFALVVLAATNAAILPSSTRANLIVGYVSTGDRLLYR--SYVYQPARPNTIQYQDIV 230
T+ ++V+ AA+ S + + D L++ +Y Y P PN ++ +
Sbjct: 726 TVAFGNVIVVVIAEAALFESQASEFFLFAGLMFADMLIFMVMAYYYVPNDPNKVEEAQPL 785
Query: 231 YRGNATTRITAIQ 269
G+A T I A++
Sbjct: 786 TAGDAKTEIPALE 798
>AE014298-570|AAN09111.1| 810|Drosophila melanogaster CG2930-PB,
isoform B protein.
Length = 810
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/73 (23%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Frame = +3
Query: 57 TILVFALVVLAATNAAILPSSTRANLIVGYVSTGDRLLYR--SYVYQPARPNTIQYQDIV 230
T+ ++V+ AA+ S + + D L++ +Y Y P PN ++ +
Sbjct: 726 TVAFGNVIVVVIAEAALFESQASEFFLFAGLMFADMLIFMVMAYYYVPNDPNKVEEAQPL 785
Query: 231 YRGNATTRITAIQ 269
G+A T I A++
Sbjct: 786 TAGDAKTEIPALE 798
>AE014298-569|AAF45901.2| 810|Drosophila melanogaster CG2930-PA,
isoform A protein.
Length = 810
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/73 (23%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Frame = +3
Query: 57 TILVFALVVLAATNAAILPSSTRANLIVGYVSTGDRLLYR--SYVYQPARPNTIQYQDIV 230
T+ ++V+ AA+ S + + D L++ +Y Y P PN ++ +
Sbjct: 726 TVAFGNVIVVVIAEAALFESQASEFFLFAGLMFADMLIFMVMAYYYVPNDPNKVEEAQPL 785
Query: 231 YRGNATTRITAIQ 269
G+A T I A++
Sbjct: 786 TAGDAKTEIPALE 798
>BT016007-1|AAV36892.1| 288|Drosophila melanogaster RE26656p
protein.
Length = 288
Score = 28.3 bits (60), Expect = 7.6
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 245 NDAHYGYTGHGSWGNSV 295
+ A YG +GHG WG S+
Sbjct: 257 SSASYGSSGHGGWGRSI 273
>AE014297-419|AAF51902.1| 288|Drosophila melanogaster CG1153-PA
protein.
Length = 288
Score = 28.3 bits (60), Expect = 7.6
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 245 NDAHYGYTGHGSWGNSV 295
+ A YG +GHG WG S+
Sbjct: 257 SSASYGSSGHGGWGRSI 273
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,269,059
Number of Sequences: 53049
Number of extensions: 456010
Number of successful extensions: 1059
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1059
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2193288294
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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