Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10h19f
         (663 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0102 + 834660-834911,835460-835568,835891-836006,836116-83...    29   2.5  
03_02_0151 + 5947177-5947322,5947461-5947607,5947707-5947931,594...    29   2.5  
08_02_1494 + 27523016-27524040,27524971-27525118                       28   5.8  
02_04_0363 + 22369461-22370127,22370240-22370310,22370412-223709...    28   5.8  
12_01_0590 - 4813764-4814401,4814785-4814872,4815176-4815376,481...    28   7.6  
09_06_0304 - 22154086-22154364,22154679-22155058,22155763-22156183     28   7.6  
07_03_1464 + 26726527-26727552                                         28   7.6  

>06_01_0102 +
           834660-834911,835460-835568,835891-836006,836116-836235,
           836398-836436,836678-836811,837035-837299,837615-837698,
           837943-838003,838748-838810,839174-839216,839632-839711,
           839831-840267
          Length = 600

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 28/125 (22%), Positives = 56/125 (44%), Gaps = 7/125 (5%)
 Frame = +2

Query: 281 RKAAYPIPIDIMNPSDNLHTAAVCVYPTKVPD--VCTALKAMKLEKNI---QVAAVATGF 445
           R+A  P  + +++ +  +HT  +  Y T+  D  V   +    + K+    ++       
Sbjct: 60  RQATQPGSLSLVSDAWEVHTDKILPYLTENNDFMVIGVIGPTGVGKSTIMNELYGYDGSS 119

Query: 446 PSGLYPLATRLEEIRMTVGYGATEIDVVIDRSLVLTGEWETLFNE--IQQMKKACGSAHL 619
           P  L P AT+ EEI+    +    ID+ I    V+  + + +F+   +  M K  GS+ +
Sbjct: 120 PGMLPPFATQTEEIKAMAKHCTAGIDIRISNERVILLDTQPVFSPSVLIDMMKPDGSSAI 179

Query: 620 KVILG 634
            ++ G
Sbjct: 180 PILSG 184


>03_02_0151 +
           5947177-5947322,5947461-5947607,5947707-5947931,
           5948036-5948213,5948328-5948595,5948684-5948786,
           5948882-5949006,5949091-5949169,5949250-5949394,
           5949500-5949660,5949750-5949870,5950081-5950275
          Length = 630

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 20/61 (32%), Positives = 32/61 (52%)
 Frame = -1

Query: 279 QSLLTFDDVSSPESVVKSIRVIAFISHALSSLGDTTLLYNIDFT*ESTLLLFINVLSKGI 100
           Q LL   D S+P   +KS++V  F   +LS++G +T++ N D      L  + +   KG 
Sbjct: 374 QELLDMVD-SAPIIAIKSLKVSDFQGLSLSTVGRSTIVVNPDLPEAEQLRAWYDSEGKGT 432

Query: 99  S 97
           S
Sbjct: 433 S 433


>08_02_1494 + 27523016-27524040,27524971-27525118
          Length = 390

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 8/31 (25%), Positives = 17/31 (54%)
 Frame = -1

Query: 639 PTPRITLRCADPHAFFICCISLNSVSHSPVK 547
           P+P + +    PH   +CC+  ++ + +P K
Sbjct: 98  PSPHVRVEAVSPHRGLVCCVDADADAATPRK 128


>02_04_0363 +
           22369461-22370127,22370240-22370310,22370412-22370978,
           22371056-22371301
          Length = 516

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 427 CSGYRISVWFVSSRNEIRRDSDDRRV 504
           C+GYR S  F+ +  ++  D DD R+
Sbjct: 329 CTGYRYSFPFLDTEGKVAVDDDDNRI 354


>12_01_0590 - 4813764-4814401,4814785-4814872,4815176-4815376,
            4816803-4816830,4817136-4817339,4817352-4819136,
            4820358-4821139
          Length = 1241

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 16/54 (29%), Positives = 23/54 (42%)
 Frame = +2

Query: 380  CTALKAMKLEKNIQVAAVATGFPSGLYPLATRLEEIRMTVGYGATEIDVVIDRS 541
            C+  +  KLE  +      T  P G+  L   L EI +   YGA   D+   +S
Sbjct: 839  CSMPRLQKLELWLDATGCGTCLPVGIDHLPACLREIHINRDYGADRRDIETAKS 892


>09_06_0304 - 22154086-22154364,22154679-22155058,22155763-22156183
          Length = 359

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
 Frame = +2

Query: 443 FPSGLY--PLATRLEEIRMTVGYGATEIDVVIDRSLVLTGEWETLFNEIQQMKKACGSAH 616
           + SG+Y  P  TR+    + VGYG T  +    +  ++   W T + E   ++       
Sbjct: 265 YKSGVYSGPCGTRINHAVLAVGYGVTLNNT---KYWIVKNSWNTTWGESGYIRMKRDVGG 321

Query: 617 LKVILGVGELGTY 655
            K + G+   G Y
Sbjct: 322 NKGLCGIAMYGIY 334


>07_03_1464 + 26726527-26727552
          Length = 341

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 15/54 (27%), Positives = 25/54 (46%)
 Frame = +2

Query: 290 AYPIPIDIMNPSDNLHTAAVCVYPTKVPDVCTALKAMKLEKNIQVAAVATGFPS 451
           A P+ +        L +AA C Y      +C  L+A+ +  N ++A  A  FP+
Sbjct: 81  ALPVVVFFHGGGFVLFSAASCYYDRLCRRICRELRAVVVSVNYRLAGPARRFPA 134


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,101,379
Number of Sequences: 37544
Number of extensions: 339824
Number of successful extensions: 843
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 843
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1667659452
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)