Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10h19f
         (663 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    27   0.53 
DQ974165-1|ABJ52805.1|  482|Anopheles gambiae serpin 5 protein.        25   1.6  
EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.       23   8.6  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   8.6  

>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 27.1 bits (57), Expect = 0.53
 Identities = 16/59 (27%), Positives = 26/59 (44%)
 Frame = +2

Query: 86  ETIDDMPLDNTFINKSNVDSQVKSILYNNVVSPKDERAWLMKAITLIDLTTLSGDDTSS 262
           E  D +P+ +    +   D  ++ I    ++    ERA  +   T +D  TL GD  SS
Sbjct: 603 EDPDSIPMISKLKYEEQYDKALRYIFGKTLICRNLERATELAKSTGLDCVTLEGDQVSS 661


>DQ974165-1|ABJ52805.1|  482|Anopheles gambiae serpin 5 protein.
          Length = 482

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 524 VVIDRSLVLTGEWETLFNEIQ 586
           +++  +L   G WET FNE Q
Sbjct: 253 MIVANALYFRGTWETFFNEPQ 273


>EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.
          Length = 661

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -3

Query: 244 RKCCQVN*SDCFHKPC 197
           R C + N +DC+H  C
Sbjct: 79  RDCAKGNHTDCYHPAC 94


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -1

Query: 558 SPVKTKLLSITTSISVAPYPTV 493
           +PVK K  ++ +S+S  P P V
Sbjct: 201 APVKPKARNLLSSVSTTPSPEV 222


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 703,520
Number of Sequences: 2352
Number of extensions: 15397
Number of successful extensions: 27
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)