Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10h19f
         (663 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061335-1|AAL28883.1|  347|Drosophila melanogaster LD25963p pro...   169   3e-42
AE013599-1486|AAF58511.1|  347|Drosophila melanogaster CG8525-PA...   169   3e-42
BT011013-1|AAR30173.1|  290|Drosophila melanogaster SD14515p pro...   158   7e-39
AY051582-1|AAK93006.1|  529|Drosophila melanogaster GH23019p pro...    31   1.4  
AE014134-1281|AAN10632.1|  529|Drosophila melanogaster CG12789-P...    31   1.4  
AE014134-1280|AAF52518.3|  563|Drosophila melanogaster CG12789-P...    31   1.4  

>AY061335-1|AAL28883.1|  347|Drosophila melanogaster LD25963p
           protein.
          Length = 347

 Score =  169 bits (411), Expect = 3e-42
 Identities = 87/170 (51%), Positives = 115/170 (67%), Gaps = 8/170 (4%)
 Frame = +2

Query: 176 VSPKDERAWLMKAITLIDLTTLSGDDTSSNVRRLCRKAAYPIPIDIMNPS------DNLH 337
           V+  +E AW ++A+ L DLTTL+GDDT++NVRRLC +A YP      +          +H
Sbjct: 44  VTGANEIAWALRALMLTDLTTLAGDDTAANVRRLCLRACYPFEPQFFDKFFDRALIPEMH 103

Query: 338 TAAVCVYPTKVPDVCTALKAM-KLEKNIQVAAVATGFPSGLYPLATRLEEIRMTVGYGAT 514
           TAAVCVYP +V D   A++   KL+K + +AAVATGFP+G Y L TRL+EI   +  GAT
Sbjct: 104 TAAVCVYPARVKDAYLAIQQYDKLDK-VAIAAVATGFPTGQYGLQTRLQEISHAILAGAT 162

Query: 515 EIDVVIDRSLVLTGEWETLFNEIQQMKKACGS-AHLKVILGVGELGTYYN 661
           EID+VI+R L L G+WE ++NE+  M+ ACG  AHLK IL +GELGT  N
Sbjct: 163 EIDIVINRQLALVGDWEAMYNEVVLMRSACGQRAHLKTILAIGELGTMDN 212


>AE013599-1486|AAF58511.1|  347|Drosophila melanogaster CG8525-PA
           protein.
          Length = 347

 Score =  169 bits (411), Expect = 3e-42
 Identities = 87/170 (51%), Positives = 115/170 (67%), Gaps = 8/170 (4%)
 Frame = +2

Query: 176 VSPKDERAWLMKAITLIDLTTLSGDDTSSNVRRLCRKAAYPIPIDIMNPS------DNLH 337
           V+  +E AW ++A+ L DLTTL+GDDT++NVRRLC +A YP      +          +H
Sbjct: 44  VTGANEIAWALRALMLTDLTTLAGDDTAANVRRLCLRACYPFEPQFFDKFFDRALIPEMH 103

Query: 338 TAAVCVYPTKVPDVCTALKAM-KLEKNIQVAAVATGFPSGLYPLATRLEEIRMTVGYGAT 514
           TAAVCVYP +V D   A++   KL+K + +AAVATGFP+G Y L TRL+EI   +  GAT
Sbjct: 104 TAAVCVYPARVKDAYLAIQQYDKLDK-VAIAAVATGFPTGQYGLQTRLQEISHAILAGAT 162

Query: 515 EIDVVIDRSLVLTGEWETLFNEIQQMKKACGS-AHLKVILGVGELGTYYN 661
           EID+VI+R L L G+WE ++NE+  M+ ACG  AHLK IL +GELGT  N
Sbjct: 163 EIDIVINRQLALVGDWEAMYNEVVLMRSACGQRAHLKTILAIGELGTMDN 212


>BT011013-1|AAR30173.1|  290|Drosophila melanogaster SD14515p
           protein.
          Length = 290

 Score =  158 bits (383), Expect = 7e-39
 Identities = 82/155 (52%), Positives = 105/155 (67%), Gaps = 8/155 (5%)
 Frame = +2

Query: 221 LIDLTTLSGDDTSSNVRRLCRKAAYPIPIDIMNPS------DNLHTAAVCVYPTKVPDVC 382
           L DLTTL+GDDT++NVRRLC +A YP      +          +HTAAVCVYP +V D  
Sbjct: 2   LTDLTTLAGDDTAANVRRLCLRACYPFEPQFFDKFFDRALIPEMHTAAVCVYPARVKDAY 61

Query: 383 TALKAM-KLEKNIQVAAVATGFPSGLYPLATRLEEIRMTVGYGATEIDVVIDRSLVLTGE 559
            A++   KL+K + +AAVATGFP+G Y L TRL+EI   +  GATEID+VI+R L L G+
Sbjct: 62  LAIQQYDKLDK-VAIAAVATGFPTGQYGLQTRLQEISHAILAGATEIDIVINRQLALVGD 120

Query: 560 WETLFNEIQQMKKACGS-AHLKVILGVGELGTYYN 661
           WE ++NE+  M+ ACG  AHLK IL +GELGT  N
Sbjct: 121 WEAMYNEVVLMRSACGQRAHLKTILAIGELGTMDN 155


>AY051582-1|AAK93006.1|  529|Drosophila melanogaster GH23019p
           protein.
          Length = 529

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
 Frame = +2

Query: 293 YPIPIDIMNPSDNLHTAAVCVYP-TKVP-DVCTALKAMKLEKNIQVAAVATGFPSGLYPL 466
           YP  ++ ++P+   H   + V P T +P +V    +   L + IQ  ++ TG P   +PL
Sbjct: 334 YPDQVEGLSPNQKDHEFYMVVQPSTGIPLEVAARFQVNMLVEPIQGISLYTGIPRIFFPL 393

Query: 467 ATRLEEIRMT 496
               +++R+T
Sbjct: 394 VWFEQKVRIT 403


>AE014134-1281|AAN10632.1|  529|Drosophila melanogaster CG12789-PB,
           isoform B protein.
          Length = 529

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
 Frame = +2

Query: 293 YPIPIDIMNPSDNLHTAAVCVYP-TKVP-DVCTALKAMKLEKNIQVAAVATGFPSGLYPL 466
           YP  ++ ++P+   H   + V P T +P +V    +   L + IQ  ++ TG P   +PL
Sbjct: 334 YPDQVEGLSPNQKDHEFYMVVQPSTGIPLEVAARFQVNMLVEPIQGISLYTGIPRIFFPL 393

Query: 467 ATRLEEIRMT 496
               +++R+T
Sbjct: 394 VWFEQKVRIT 403


>AE014134-1280|AAF52518.3|  563|Drosophila melanogaster CG12789-PA,
           isoform A protein.
          Length = 563

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
 Frame = +2

Query: 293 YPIPIDIMNPSDNLHTAAVCVYP-TKVP-DVCTALKAMKLEKNIQVAAVATGFPSGLYPL 466
           YP  ++ ++P+   H   + V P T +P +V    +   L + IQ  ++ TG P   +PL
Sbjct: 368 YPDQVEGLSPNQKDHEFYMVVQPSTGIPLEVAARFQVNMLVEPIQGISLYTGIPRIFFPL 427

Query: 467 ATRLEEIRMT 496
               +++R+T
Sbjct: 428 VWFEQKVRIT 437


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,305,008
Number of Sequences: 53049
Number of extensions: 606450
Number of successful extensions: 1495
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1489
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2848092300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)