Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10h18r
         (632 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    22   4.9  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    21   8.6  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   8.6  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   8.6  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   8.6  

>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 6/18 (33%), Positives = 10/18 (55%)
 Frame = +1

Query: 247 IRCSHHLQAXIFYWYPRV 300
           +RC   +   +  WYPR+
Sbjct: 79  VRCQDQILIFLVNWYPRL 96


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -2

Query: 382 WLVSRVSPKKLGVG 341
           W++S   P+KL +G
Sbjct: 240 WILSGADPQKLAIG 253


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 69  KVFFEDAXKNCS 104
           KV F+D  +NCS
Sbjct: 209 KVLFKDVDRNCS 220


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 69  KVFFEDAXKNCS 104
           KV F+D  +NCS
Sbjct: 209 KVLFKDVDRNCS 220


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 69  KVFFEDAXKNCS 104
           KV F+D  +NCS
Sbjct: 209 KVLFKDVDRNCS 220


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,768
Number of Sequences: 336
Number of extensions: 3053
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)