Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10h18r
(632 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81039-9|CAE17687.1| 121|Caenorhabditis elegans Hypothetical pr... 32 0.30
Z67881-3|CAD44099.1| 1405|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z50797-11|CAA90676.2| 1405|Caenorhabditis elegans Hypothetical p... 30 1.6
Z50797-9|CAL36516.1| 640|Caenorhabditis elegans Hypothetical pr... 30 1.6
AF016442-5|AAT92071.1| 155|Caenorhabditis elegans Hypothetical ... 29 2.1
Z81044-12|CAB02811.2| 527|Caenorhabditis elegans Hypothetical p... 27 8.4
U28739-7|AAB93458.1| 681|Caenorhabditis elegans Cell division c... 27 8.4
U28739-3|AAB93459.1| 1063|Caenorhabditis elegans Cell division c... 27 8.4
AY661745-1|AAT74544.1| 681|Caenorhabditis elegans CDC-14 phosph... 27 8.4
AY661744-1|AAT74543.1| 1063|Caenorhabditis elegans CDC-14 phosph... 27 8.4
AF000363-1|AAB94407.1| 681|Caenorhabditis elegans protein phosp... 27 8.4
>Z81039-9|CAE17687.1| 121|Caenorhabditis elegans Hypothetical
protein C25D7.15 protein.
Length = 121
Score = 32.3 bits (70), Expect = 0.30
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Frame = -3
Query: 279 YXCLKMVATPDD-KTYGNTMDVIRGCIPRAQIDSVCLGLIAVEKARGHSDVRCFICNGDS 103
Y C+K ++ K + T +GC C L+ +A+G + +C+ CNGD
Sbjct: 41 YTCMKFDCKVNNPKKFRQTT---KGCNDPGNALVACTQLMTQCQAQGGTG-QCYTCNGDY 96
Query: 102 CN-SXTRLQKTPLLFILALSLYYIF 31
CN S T + + A+S + IF
Sbjct: 97 CNSSPTSFSILISIVVPAISYFLIF 121
>Z67881-3|CAD44099.1| 1405|Caenorhabditis elegans Hypothetical protein
T22H6.6a protein.
Length = 1405
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +1
Query: 457 HRRNTENKQNHFSI-ADWKYI*KHNGIRTALVNTTFITLI-AKAKCFIF 597
H+ T+ K+ HF DWK+ K I++ +NTT + L K K F F
Sbjct: 893 HKLATQVKEAHFKAHPDWKWSTKEKKIKSESLNTTPVALTPLKNKVFDF 941
>Z50797-11|CAA90676.2| 1405|Caenorhabditis elegans Hypothetical
protein T22H6.6a protein.
Length = 1405
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +1
Query: 457 HRRNTENKQNHFSI-ADWKYI*KHNGIRTALVNTTFITLI-AKAKCFIF 597
H+ T+ K+ HF DWK+ K I++ +NTT + L K K F F
Sbjct: 893 HKLATQVKEAHFKAHPDWKWSTKEKKIKSESLNTTPVALTPLKNKVFDF 941
>Z50797-9|CAL36516.1| 640|Caenorhabditis elegans Hypothetical
protein T22H6.6b protein.
Length = 640
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +1
Query: 457 HRRNTENKQNHFSI-ADWKYI*KHNGIRTALVNTTFITLI-AKAKCFIF 597
H+ T+ K+ HF DWK+ K I++ +NTT + L K K F F
Sbjct: 128 HKLATQVKEAHFKAHPDWKWSTKEKKIKSESLNTTPVALTPLKNKVFDF 176
>AF016442-5|AAT92071.1| 155|Caenorhabditis elegans Hypothetical
protein K12B6.9 protein.
Length = 155
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = -3
Query: 177 CLGLIAVEKARGHSDVRCFICNGDSCNSXTRLQ-KTPLLFILALSLYY 37
C G E++ G CN ++CNS +L P +F+++ ++Y
Sbjct: 108 CKGSGCAERSEGDEIYNVCCCNTETCNSNFKLSIFLPFIFLISRFIFY 155
>Z81044-12|CAB02811.2| 527|Caenorhabditis elegans Hypothetical
protein C30H6.5 protein.
Length = 527
Score = 27.5 bits (58), Expect = 8.4
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +1
Query: 73 CFLKTRXRIAAVSVANKTPHVAMSSCFFYCYKTQAHGVDLRSWYTAS-NYIHCISVCLII 249
CF+KT RI ++ V + +C C ++ L+++Y AS NY + +C++
Sbjct: 320 CFIKTPNRILHKFEESRIGGVTLETCMRQCAQS------LQNFYCASINYSFGLKICILN 373
Query: 250 RCSHHL 267
+ HL
Sbjct: 374 GGNLHL 379
>U28739-7|AAB93458.1| 681|Caenorhabditis elegans Cell division
cycle related protein14, isoform c protein.
Length = 681
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = -3
Query: 315 PPPSTDSRIPI---EYXCLKMVATPDDKTYGNTMDVIRGCIPRAQIDSV 178
PPP+T SR P+ Y + +T YG+ + RG + + + S+
Sbjct: 624 PPPTTSSRAPLSPHNYSTTQGYSTSSRGLYGDKKPLARGSVSTSTLPSM 672
>U28739-3|AAB93459.1| 1063|Caenorhabditis elegans Cell division
cycle related protein14, isoform b protein.
Length = 1063
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = -3
Query: 315 PPPSTDSRIPI---EYXCLKMVATPDDKTYGNTMDVIRGCIPRAQIDSV 178
PPP+T SR P+ Y + +T YG+ + RG + + + S+
Sbjct: 624 PPPTTSSRAPLSPHNYSTTQGYSTSSRGLYGDKKPLARGSVSTSTLPSM 672
>AY661745-1|AAT74544.1| 681|Caenorhabditis elegans CDC-14
phosphatase isoform C protein.
Length = 681
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = -3
Query: 315 PPPSTDSRIPI---EYXCLKMVATPDDKTYGNTMDVIRGCIPRAQIDSV 178
PPP+T SR P+ Y + +T YG+ + RG + + + S+
Sbjct: 624 PPPTTSSRAPLSPHNYSTTQGYSTSSRGLYGDKKPLARGSVSTSTLPSM 672
>AY661744-1|AAT74543.1| 1063|Caenorhabditis elegans CDC-14
phosphatase isoform B protein.
Length = 1063
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = -3
Query: 315 PPPSTDSRIPI---EYXCLKMVATPDDKTYGNTMDVIRGCIPRAQIDSV 178
PPP+T SR P+ Y + +T YG+ + RG + + + S+
Sbjct: 624 PPPTTSSRAPLSPHNYSTTQGYSTSSRGLYGDKKPLARGSVSTSTLPSM 672
>AF000363-1|AAB94407.1| 681|Caenorhabditis elegans protein
phosphatase CDC14 protein.
Length = 681
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = -3
Query: 315 PPPSTDSRIPI---EYXCLKMVATPDDKTYGNTMDVIRGCIPRAQIDSV 178
PPP+T SR P+ Y + +T YG+ + RG + + + S+
Sbjct: 624 PPPTTSSRAPLSPHNYSTTQGYSTSSRGLYGDKKPLARGSVSTSTLPSM 672
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,780,818
Number of Sequences: 27780
Number of extensions: 281722
Number of successful extensions: 623
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 623
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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