Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10h14r
(724 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 4e-17
SB_26408| Best HMM Match : Lipase (HMM E-Value=0) 65 6e-11
SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41) 62 4e-10
SB_43904| Best HMM Match : Lipase (HMM E-Value=5e-07) 56 4e-08
SB_7713| Best HMM Match : Lipase (HMM E-Value=0.0064) 38 0.008
SB_30050| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.077
SB_54628| Best HMM Match : RecR (HMM E-Value=0.062) 31 1.2
SB_53747| Best HMM Match : S1-P1_nuclease (HMM E-Value=2.9) 29 3.8
SB_59712| Best HMM Match : SAP (HMM E-Value=3e-13) 29 5.0
SB_38048| Best HMM Match : CUB (HMM E-Value=1.4e-31) 29 5.0
SB_54729| Best HMM Match : Sprouty (HMM E-Value=4.4e-11) 28 8.8
>SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 940
Score = 85.4 bits (202), Expect = 4e-17
Identities = 70/228 (30%), Positives = 97/228 (42%), Gaps = 16/228 (7%)
Frame = -2
Query: 663 AHLAAEDVNVIAVDWSPGSKL-YTEGLANARQCGRLIAEFINILTTTFSYDSELIRIVXX 487
A + ED NVI DWS G+ + Y + AN R G I E I L +V
Sbjct: 635 ALIKQEDANVITTDWSRGATIPYEQATANTRMVGAQITELIKFLNNQTGNTPASFYLVGF 694
Query: 486 XXXXXXXXXXARN---SNQPIPHIIALDP-SLHGWTHNPEI-LNPDDANIVEVLHTTAGL 322
R + Q + I LDP S+H + ++ L+P DA+ V+V+HT L
Sbjct: 695 SLGAHISGYVGRRIAKTGQKLNRITGLDPASIHFVNAHVDVRLDPSDADFVDVMHTDMDL 754
Query: 321 IGYDYPLGDLDFYPSGGSGQSGCLD--DA------CSHSYAYVFYAESIRQAVDGGNEFV 166
G G +DFYP+GG Q GC D D C H A +YAES+ F
Sbjct: 755 AGTPTVSGHIDFYPNGGKKQPGCRDLLDGPINYVICDHMRAPEYYAESVTTTCP-MLAFP 813
Query: 165 GTACNSYEEARNLRCSG-PRDAI-FGGIEVKEVEMGIYIFLTNIRPPF 28
T+ + +E C P ++ + + K V G + LTN PF
Sbjct: 814 CTSMDDFERGYCFDCENRPCPSVGYNAGKRKGVATGKHFSLTNADKPF 861
>SB_26408| Best HMM Match : Lipase (HMM E-Value=0)
Length = 714
Score = 64.9 bits (151), Expect = 6e-11
Identities = 61/223 (27%), Positives = 94/223 (42%), Gaps = 15/223 (6%)
Frame = -2
Query: 645 DVNVIAVDWSPGSKL-YTEGLANARQCGRLIAEFINILTTTFSYDSELIRIVXXXXXXXX 469
D NVI VDW G+ +T +AN R G A + IL + ++
Sbjct: 143 DFNVIIVDWMRGAWFPFTRAVANTRLVGAQTARLLQILEERSGRKLAYVHVIGFSFGAHV 202
Query: 468 XXXXARNSNQP---IPHIIALDPSLHGW-THNPEI-LNPDDANIVEVLHTTAGLIGYDYP 304
R + I I ALDP+ + H+ ++ L+ DA V+V+HT+A G
Sbjct: 203 AGYVGRRMKKRGRMIDRITALDPAAMWFHKHHEDVRLDTSDALFVDVIHTSADY-GITST 261
Query: 303 LGDLDFYPSGGSGQSGCLDDACSHSYAYVFYAESIRQAVDGGNEFVGTACNSY----EEA 136
+G DFYP+GG Q GC D+ +Y+F A+ + + T SY E+
Sbjct: 262 IGHADFYPNGGKKQPGC-DNFFRGFSSYLFCGHKRAPALFTTSLYTKTPLYSYPCRSEDD 320
Query: 135 RN----LRCSGPRDAIFGGIEVKEVEM-GIYIFLTNIRPPFAR 22
N L+C G + ++ K + G + F T P+ R
Sbjct: 321 FNSGNCLKCDGKCPTMGFRLDTKNNTLSGSFYFRTTDTAPYRR 363
>SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41)
Length = 291
Score = 62.1 bits (144), Expect = 4e-10
Identities = 45/142 (31%), Positives = 68/142 (47%), Gaps = 7/142 (4%)
Frame = -2
Query: 657 LAAEDVNVIAVDWSPGSKL-YTEGLANARQCGRLIAEFIN-ILTTTFSYDSELIRIVXXX 484
L D NVI VDW G+K+ Y +AN R G +A F+ IL+ + S + +
Sbjct: 120 LRKSDDNVIIVDWIRGAKIPYVRAVANTRLVGAQVAAFMKTILSLSGSREGGAFHSIGFS 179
Query: 483 XXXXXXXXXA---RNSNQPIPHIIALDPS-LHGWTHNPEI-LNPDDANIVEVLHTTAGLI 319
+ + + I LDP+ L P++ L+ DA V+V+HT+ +
Sbjct: 180 LGAHISGYVGQRLKRIGRHLDRITGLDPATLMFKGEAPDVRLDRLDAQFVDVIHTSY-VF 238
Query: 318 GYDYPLGDLDFYPSGGSGQSGC 253
G P G +DFYP+GG+ Q GC
Sbjct: 239 GITAPHGHMDFYPNGGTSQRGC 260
>SB_43904| Best HMM Match : Lipase (HMM E-Value=5e-07)
Length = 408
Score = 55.6 bits (128), Expect = 4e-08
Identities = 38/126 (30%), Positives = 52/126 (41%), Gaps = 10/126 (7%)
Frame = -2
Query: 375 LNPDDANIVEVLHTTAGLIGYDYPLGDLDFYPSGGSGQSGCLDDA--------CSHSYAY 220
L+P DA V+V+HT G G +DFYP+GG Q GC D A C H A+
Sbjct: 18 LDPSDAEFVDVMHTDMDFAGTSTQSGHIDFYPNGGKNQPGCRDIADGPSNALKCDHVRAH 77
Query: 219 VFYAESIRQAVDGGNEFVGTACNSYEEARNLRCSGP--RDAIFGGIEVKEVEMGIYIFLT 46
++ ESI F + + +E C A + ++ K G Y T
Sbjct: 78 DYFTESITSQC-AMRAFPCASMHDFERGLCFDCVNNLCPSAGYNAVKSKGKAKGKYFLYT 136
Query: 45 NIRPPF 28
N PF
Sbjct: 137 NRDEPF 142
>SB_7713| Best HMM Match : Lipase (HMM E-Value=0.0064)
Length = 131
Score = 37.9 bits (84), Expect = 0.008
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 5/77 (6%)
Frame = -2
Query: 708 HGEXVAGNFNAFVIPAH--LAAEDVNVIAVDWSPGS---KLYTEGLANARQCGRLIAEFI 544
HG +GN + + L E +NVI VDW G+ LY N R G +AE I
Sbjct: 30 HGFMQSGNVSWIRVMRDELLKREPMNVITVDWQSGADGLNLYHVAAGNTRVVGAQLAELI 89
Query: 543 NILTTTFSYDSELIRIV 493
+ F +D + ++
Sbjct: 90 TTIQRVFDFDLRRVHLI 106
>SB_30050| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 161
Score = 34.7 bits (76), Expect = 0.077
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -2
Query: 714 HNHGEXVAGNFNAFVIPAHLAAEDVNVIAVDWSPGSK-LYTEGLANARQCG 565
H + E + ++ + A L +DVNV+ DW PG+ +Y + AN R G
Sbjct: 109 HGYTESGSTSWVGHMRQALLQKDDVNVVITDWGPGADGMYWQATANTRLVG 159
>SB_54628| Best HMM Match : RecR (HMM E-Value=0.062)
Length = 1082
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -2
Query: 411 PSLHGWTHNPEILNPDDANIVEVLHTTAGLIGY 313
PSL H P IL PD A VL ++G+ GY
Sbjct: 568 PSLVTPAHQPWILQPDPAKASRVLEDSSGIKGY 600
>SB_53747| Best HMM Match : S1-P1_nuclease (HMM E-Value=2.9)
Length = 554
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 448 ISSCDTSDVSTETKSDNANKLGIVAEGCSQDIDEFSN*STALTS 579
++S T+ +T TK++ A S +EF++ STALT+
Sbjct: 484 VTSASTTATTTSTKTNEVTSASTTATTTSTKTNEFTSASTALTT 527
>SB_59712| Best HMM Match : SAP (HMM E-Value=3e-13)
Length = 1072
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Frame = -2
Query: 423 IALDPSLHG--WTH-NPEILNPDDANIVEVLHTTAGLIG 316
+A +LHG W +P+IL+ D A+ ++LH TAG +G
Sbjct: 875 VATRAALHGVKWPPTSPKILSVDFADDKQMLHDTAGALG 913
>SB_38048| Best HMM Match : CUB (HMM E-Value=1.4e-31)
Length = 551
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = -2
Query: 237 SHSYAYVFYAESIRQAVDGGNEFVGTACNS-YEEARNLRCSGPRDAIFG 94
+++Y ++ S+ DG N+ G C+S YE+ R C+ P A G
Sbjct: 113 NYTYHKAIFSYSVGMCGDGAND-CGDNCDSNYEQTRQRSCTSPSPAHAG 160
>SB_54729| Best HMM Match : Sprouty (HMM E-Value=4.4e-11)
Length = 308
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/54 (22%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +1
Query: 340 QDFYDVSIVRIENFRVVSPTVERWVQSNNVRNRL-V*ISSCDTSDVSTETKSDN 498
+++Y I R +NF+++ P + + ++ +N+ ++ V +S C +T D+
Sbjct: 48 EEYYPFVIGRGKNFKIIDPKLFKQLRKHNIHQKVPVWVSDCAKKTSLDKTVGDS 101
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,763,003
Number of Sequences: 59808
Number of extensions: 426699
Number of successful extensions: 962
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 959
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1925890720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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