Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10h14f
         (621 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    24   1.2  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   4.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   4.8  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   6.3  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   6.3  

>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 9/20 (45%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
 Frame = -1

Query: 375 IQQLIDRIDERWPDP-RCII 319
           +QQL+D I+ +  DP +C+I
Sbjct: 120 LQQLVDNIEHKLSDPNQCVI 139


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 102 HLFHRGSPQVSEPLLLS 152
           H F  GSP+ +EPL  S
Sbjct: 5   HRFATGSPEETEPLYSS 21


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 102 HLFHRGSPQVSEPLLLS 152
           H F  GSP+ +EPL  S
Sbjct: 5   HRFATGSPEETEPLYSS 21


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 549 LNPDDANIVEVL 584
           LNPD+ N+ E+L
Sbjct: 369 LNPDNPNVYEIL 380


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -2

Query: 431 DNANKLGIVAEGCSQDIDEFSN*STALTSV 342
           + ANK  I+  G   DID+    +  +TSV
Sbjct: 218 NEANKTKILLVGLKIDIDQEEERNVVVTSV 247


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,341
Number of Sequences: 336
Number of extensions: 2699
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15875032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)