Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10h11r
(775 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein ... 30 2.1
AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or cys... 30 2.1
U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein ... 29 3.7
AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or cys... 29 3.7
U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein ... 29 4.9
AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or cys... 29 4.9
AC024771-10|AAK70664.1| 433|Caenorhabditis elegans Hypothetical... 29 4.9
AL022270-1|CAB63432.1| 1270|Caenorhabditis elegans Hypothetical ... 28 6.4
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z81533-1|CAB04334.1| 329|Caenorhabditis elegans Hypothetical pr... 28 8.5
U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein... 28 8.5
AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or cys... 28 8.5
>U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform a protein.
Length = 366
Score = 29.9 bits (64), Expect = 2.1
Identities = 27/82 (32%), Positives = 34/82 (41%), Gaps = 8/82 (9%)
Frame = -1
Query: 718 KLGIQAIFNRQNSGLTKILDND-------EPLYVSKAVQKAFIEVN-XXXXXXXXXXXXX 563
KLG++ Q+ G+ K DND + LYVSK KA IEV+
Sbjct: 271 KLGLEEAL--QSLGIKKAFDNDADLGNMADGLYVSKVTHKALIEVDEEGTKAAAATTVSI 328
Query: 562 XXXXXAFIDEPPVPSFDADRPF 497
F+ E P F AD PF
Sbjct: 329 SLKSAMFVMEEP-KDFTADHPF 349
>AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 29.9 bits (64), Expect = 2.1
Identities = 27/82 (32%), Positives = 34/82 (41%), Gaps = 8/82 (9%)
Frame = -1
Query: 718 KLGIQAIFNRQNSGLTKILDND-------EPLYVSKAVQKAFIEVN-XXXXXXXXXXXXX 563
KLG++ Q+ G+ K DND + LYVSK KA IEV+
Sbjct: 271 KLGLEEAL--QSLGIKKAFDNDADLGNMADGLYVSKVTHKALIEVDEEGTKAAAATTVSI 328
Query: 562 XXXXXAFIDEPPVPSFDADRPF 497
F+ E P F AD PF
Sbjct: 329 SLKSAMFVMEEP-KDFTADHPF 349
>U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein 7,
isoform c protein.
Length = 365
Score = 29.1 bits (62), Expect = 3.7
Identities = 30/100 (30%), Positives = 41/100 (41%), Gaps = 8/100 (8%)
Frame = -1
Query: 718 KLGIQAIFNRQNSGLTKILDND-------EPLYVSKAVQKAFIEVNXXXXXXXXXXXXXX 560
KLG++ Q+ G+ K DND + LYVSK KA IEV+
Sbjct: 271 KLGLEEAL--QSLGIKKAFDNDADLGNMADGLYVSKVTHKALIEVDEDGTVAVAATRCSI 328
Query: 559 XXXXAFIDEPPVPSFDADRPFVAAIFAHGISH-FYAIYRG 443
+ E F A+ PF I HG S+ F ++ G
Sbjct: 329 ERCRKKMKEN--IEFHAEHPFF-FILHHGTSYIFLGVFTG 365
>AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 365
Score = 29.1 bits (62), Expect = 3.7
Identities = 30/100 (30%), Positives = 41/100 (41%), Gaps = 8/100 (8%)
Frame = -1
Query: 718 KLGIQAIFNRQNSGLTKILDND-------EPLYVSKAVQKAFIEVNXXXXXXXXXXXXXX 560
KLG++ Q+ G+ K DND + LYVSK KA IEV+
Sbjct: 271 KLGLEEAL--QSLGIKKAFDNDADLGNMADGLYVSKVTHKALIEVDEDGTVAVAATRCSI 328
Query: 559 XXXXAFIDEPPVPSFDADRPFVAAIFAHGISH-FYAIYRG 443
+ E F A+ PF I HG S+ F ++ G
Sbjct: 329 ERCRKKMKEN--IEFHAEHPFF-FILHHGTSYIFLGVFTG 365
>U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform b protein.
Length = 366
Score = 28.7 bits (61), Expect = 4.9
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 7/46 (15%)
Frame = -1
Query: 718 KLGIQAIFNRQNSGLTKILDND-------EPLYVSKAVQKAFIEVN 602
KLG++ Q+ G+ K DND + LYVSK KA IEV+
Sbjct: 271 KLGLEEAL--QSLGIKKAFDNDADLGNMADGLYVSKVTHKALIEVD 314
>AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 28.7 bits (61), Expect = 4.9
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 7/46 (15%)
Frame = -1
Query: 718 KLGIQAIFNRQNSGLTKILDND-------EPLYVSKAVQKAFIEVN 602
KLG++ Q+ G+ K DND + LYVSK KA IEV+
Sbjct: 271 KLGLEEAL--QSLGIKKAFDNDADLGNMADGLYVSKVTHKALIEVD 314
>AC024771-10|AAK70664.1| 433|Caenorhabditis elegans Hypothetical
protein Y40B10A.9 protein.
Length = 433
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -2
Query: 222 PNPSFPFIKTPTNSSAEDKCVVISVKQEPNICW 124
P+PS PF +TP+NS D C+ + W
Sbjct: 349 PDPSCPFFRTPSNS---DMCIWTGTMPDDEFYW 378
>AL022270-1|CAB63432.1| 1270|Caenorhabditis elegans Hypothetical
protein C26G2.1 protein.
Length = 1270
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = -2
Query: 249 QVYLHITYEPNPSFPFIKTPTNSSAEDKCVVISVKQEPNICWF 121
Q+ Y+PN I N+ CVV +VK EP + W+
Sbjct: 127 QLVYFSNYQPNS---IIAVKENTPLNITCVVPNVKPEPEVLWY 166
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 27.9 bits (59), Expect = 8.5
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -1
Query: 367 CFDSVLVLCVCDTYPVIYLY 308
CF ++ VL VC T P++Y Y
Sbjct: 19 CFSAMAVLSVCITLPMVYNY 38
>Z81533-1|CAB04334.1| 329|Caenorhabditis elegans Hypothetical
protein F36G9.2 protein.
Length = 329
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 4/34 (11%)
Frame = -3
Query: 146 SKNLIY----VGLNVTDICCNLFFYFVYYKSKFL 57
S N+IY VG V+DIC + F+F Y K L
Sbjct: 189 SLNIIYCTTVVGFFVSDICFEILFFFFYIYWKIL 222
>U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein 6
protein.
Length = 375
Score = 27.9 bits (59), Expect = 8.5
Identities = 21/78 (26%), Positives = 32/78 (41%)
Frame = -1
Query: 727 SLPKLGIQAIFNRQNSGLTKILDNDEPLYVSKAVQKAFIEVNXXXXXXXXXXXXXXXXXX 548
+L +GI+ F ++ L+ D +Y+S+A KA IEV+
Sbjct: 286 ALMAVGIEKAFT-DSADLSNFADG---IYISQAAHKALIEVDEDGTVAAAATTISFSLTS 341
Query: 547 AFIDEPPVPSFDADRPFV 494
FI F AD PF+
Sbjct: 342 VFIPAEEPIEFTADHPFL 359
>AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 375
Score = 27.9 bits (59), Expect = 8.5
Identities = 21/78 (26%), Positives = 32/78 (41%)
Frame = -1
Query: 727 SLPKLGIQAIFNRQNSGLTKILDNDEPLYVSKAVQKAFIEVNXXXXXXXXXXXXXXXXXX 548
+L +GI+ F ++ L+ D +Y+S+A KA IEV+
Sbjct: 286 ALMAVGIEKAFT-DSADLSNFADG---IYISQAAHKALIEVDEDGTVAAAATTISFSLTS 341
Query: 547 AFIDEPPVPSFDADRPFV 494
FI F AD PF+
Sbjct: 342 VFIPAEEPIEFTADHPFL 359
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,671,641
Number of Sequences: 27780
Number of extensions: 381694
Number of successful extensions: 947
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 947
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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