Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10h11r
         (775 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              23   3.2  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    22   5.5  
DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex det...    22   7.3  
AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    22   7.3  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   9.6  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    21   9.6  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    21   9.6  
AB086196-1|BAD06465.1|  289|Apis mellifera Period protein.             21   9.6  

>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = -1

Query: 724 LPKLGI-QAIFNRQNSGLTKILDNDEPLYVSKAVQK-AFIE 608
           + K GI + I N  N G   I D +  LY+  A++K +F++
Sbjct: 34  MAKTGINKQIINDVNDGKINIEDENVQLYIECAMKKFSFVD 74


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 15/52 (28%), Positives = 22/52 (42%)
 Frame = -2

Query: 420 AHINNERNTKKYLYYIPGVLILC*YCACVIRTQLFIYTQCNKQNKIECSHLT 265
           A    E+   K L  + GV I+C     V+       +QC  Q KI  + +T
Sbjct: 325 AKFAKEKKAAKTLGIVMGVFIICWLPFFVVNLWSGFCSQCIWQEKIVFAAVT 376


>DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +2

Query: 20  NIFNFSFTNSY*AKIYFYNI 79
           NI N++  N+Y  K+Y YNI
Sbjct: 92  NISNYNNNNNYNKKLY-YNI 110


>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +2

Query: 20  NIFNFSFTNSY*AKIYFYNI 79
           NI N++  N+Y  K+Y YNI
Sbjct: 330 NISNYNNNNNYNKKLY-YNI 348


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +2

Query: 395 VFLSLLMCALNLFIIF 442
           VFLSLL+ AL L+ I+
Sbjct: 14  VFLSLLIPALILYFIY 29


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = -2

Query: 453 YTVGKMMNKFSAHINNERNTKKYLYY 376
           Y      N ++ + NN  N  K LYY
Sbjct: 329 YNNNNYNNNYNNYNNNNYNNYKKLYY 354


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +1

Query: 157 YNTFVLCTRVGWCLDKW 207
           Y T  +CT +G+  D W
Sbjct: 177 YTTPSICTALGYLKDAW 193


>AB086196-1|BAD06465.1|  289|Apis mellifera Period protein.
          Length = 289

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +1

Query: 157 YNTFVLCTRVGWCLDKW 207
           Y T  +CT +G+  D W
Sbjct: 172 YTTPSICTALGYLKDAW 188


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,430
Number of Sequences: 438
Number of extensions: 4396
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24275400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)