Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10h11f
(584 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g26390.1 68415.m03167 serpin, putative / serine protease inhi... 48 5e-06
At1g64030.1 68414.m07252 serpin family protein / serine protease... 37 0.009
At1g47710.1 68414.m05302 serpin, putative / serine protease inhi... 37 0.009
At2g35580.1 68415.m04357 serpin family protein / serine protease... 36 0.015
At2g46915.1 68415.m05859 expressed protein and genscan 32 0.32
At2g14540.1 68415.m01628 serpin family protein / serine protease... 31 0.75
At5g16690.1 68418.m01954 origin recognition complex subunit 3-re... 30 1.3
At1g62170.1 68414.m07013 serpin family protein / serine protease... 29 3.0
At3g62240.1 68416.m06992 zinc finger (C2H2 type) family protein ... 28 4.0
At1g51170.1 68414.m05754 protein kinase family protein 28 4.0
At4g29670.2 68417.m04227 thioredoxin family protein contains Pfa... 27 9.2
At4g29670.1 68417.m04226 thioredoxin family protein contains Pfa... 27 9.2
>At2g26390.1 68415.m03167 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 389
Score = 48.0 bits (109), Expect = 5e-06
Identities = 34/123 (27%), Positives = 53/123 (43%), Gaps = 1/123 (0%)
Frame = +3
Query: 216 NVVSSPLSAEYLLALITLGTTDPAHEELLTSLGIPDDDTIRXXXXXXXXXXXXIKGVTFN 395
NVV SP+S LL+LI G+ EE+L+ L P D + + +
Sbjct: 31 NVVFSPMSINVLLSLIAAGSNPVTKEEILSFLMSPSTDHLNAVLAKIADGGTERSDLCLS 90
Query: 396 VANKIYIKEGDYELDPKLKKDAVEVFDADFEKVNF-DNGAAAAGLINKWVENKTNERIKD 572
A+ ++I + Y L P K+ + A +V+F +N W + TN IK
Sbjct: 91 TAHGVWIDKSSY-LKPSFKELLENSYKASCSQVDFATKPVEVIDEVNIWADVHTNGLIKQ 149
Query: 573 LLS 581
+LS
Sbjct: 150 ILS 152
>At1g64030.1 68414.m07252 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
[Cucurbita maxima] GI:9937311, serpin [Triticum
aestivum] GI:871551; contains Pfam profile PF00079:
Serpin (serine protease inhibitor)
Length = 385
Score = 37.1 bits (82), Expect = 0.009
Identities = 35/132 (26%), Positives = 53/132 (40%), Gaps = 6/132 (4%)
Frame = +3
Query: 207 KKKNVVSSPLSAEYLLALITLGTT-DPAHEELLTSLGIPDDDTIRXXXXXXXXXXXXIKG 383
K NV+ SP S + + G D ++L+ L D ++ +
Sbjct: 27 KDSNVIFSPASINSAITMHAAGPGGDLVSGQILSFLRSSSIDELKTVFRELASVVYADRS 86
Query: 384 VT----FNVANKIYIKEGDYELDPKLKKDAVEVFDADFEKVNFDNGAAAAGL-INKWVEN 548
T AN ++I + DPK K F A + V+F + A +N WVE+
Sbjct: 87 ATGGPKITAANGLWIDKS-LPTDPKFKDLFENFFKAVYVPVDFRSEAEEVRKEVNSWVEH 145
Query: 549 KTNERIKDLLSE 584
TN IKDLL +
Sbjct: 146 HTNNLIKDLLPD 157
>At1g47710.1 68414.m05302 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 391
Score = 37.1 bits (82), Expect = 0.009
Identities = 33/153 (21%), Positives = 63/153 (41%), Gaps = 6/153 (3%)
Frame = +3
Query: 144 DSKALSSAITKFSAKFC-NELDKKKNVVSSPLSAEYLLALITLGTTDPAHEELLTSLGIP 320
+S +L + ++ AK + + NV+ SP S +L++I G+ +++L+ L
Sbjct: 5 ESISLQNQVSMNLAKHVITTVSQNSNVIFSPASINVVLSIIAAGSAGATKDQILSFLKFS 64
Query: 321 DDDTIRXXXXXXXXXXXXIK----GVTFNVANKIYIKEGDYELDPKLKKDAVEVFDADFE 488
D + G +VAN +I + P K+ + + A
Sbjct: 65 STDQLNSFSSEIVSAVLADGSANGGPKLSVANGAWIDKS-LSFKPSFKQLLEDSYKAASN 123
Query: 489 KVNFDNGAAAA-GLINKWVENKTNERIKDLLSE 584
+ +F + A +N W E +TN I ++L E
Sbjct: 124 QADFQSKAVEVIAEVNSWAEKETNGLITEVLPE 156
>At2g35580.1 68415.m04357 serpin family protein / serine protease
inhibitor family protein similar to protein zx [Hordeum
vulgare subsp. vulgare] GI:19071, serpin [Triticum
aestivum] GI:1885350; contains Pfam profile PF00079:
Serpin (serine protease inhibitor)
Length = 374
Score = 36.3 bits (80), Expect = 0.015
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +3
Query: 381 GVTFNVANKIYIKEGDYELDPKLKKDAVEVFDADFEKVNFDNGAAAAGL-INKWVENKTN 557
G T + AN ++I E ++P K + + A F +V+F A +N WVE +TN
Sbjct: 89 GPTISAANGLWI-EKTLNVEPSFKDLLLNSYKAAFNRVDFRTKADEVNREVNSWVEKQTN 147
Query: 558 ERIKDLL 578
I +LL
Sbjct: 148 GLITNLL 154
>At2g46915.1 68415.m05859 expressed protein and genscan
Length = 708
Score = 31.9 bits (69), Expect = 0.32
Identities = 26/91 (28%), Positives = 41/91 (45%)
Frame = -2
Query: 361 DDTAENDERIVSSSGIPRLVNSSSCAGSVVPKVINASKYSADNGDDTTFFFLSSSLQNFA 182
DD +E +E I SS +PR + +V ++ S D GD F LSS L
Sbjct: 86 DDDSEEEEGI-SSIHVPREKYINVSKSDLVNGIVTKLLDSQDGGDADIFLLLSSCL---- 140
Query: 181 ENLVIAEDKAFESILRTGFFISNSVNSITVK 89
++++ AE K +R F + S+ +K
Sbjct: 141 DSILHAEHKRILEQMRADFVATQSLEEEELK 171
>At2g14540.1 68415.m01628 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 407
Score = 30.7 bits (66), Expect = 0.75
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 471 FDADFEKVNFDNGAAAAGL-INKWVENKTNERIKDLL 578
F A F KV+F + A L +N W TN+ IK++L
Sbjct: 147 FKASFAKVDFRHKAEEVRLDVNTWASRHTNDLIKEIL 183
>At5g16690.1 68418.m01954 origin recognition complex subunit
3-related / ORC3-related low similarity to SP|Q9UBD5
Origin recognition complex subunit 3 (Origin recognition
complex subunit Latheo) {Homo sapiens}
Length = 556
Score = 29.9 bits (64), Expect = 1.3
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Frame = -2
Query: 370 FNFDDTAENDERIVS---SSGIPRLVNSSSCAGSVVPKVINASKYSADNGDDTTFFFLSS 200
FN DTAEND R S + + +V S S PK+ S+ + +D FF S+
Sbjct: 19 FNSSDTAENDIRASSGNHNGKLTGIVKSKRRIESPSPKIAKRSEVESVEEEDGQFF--ST 76
Query: 199 SLQNFAENLVIAEDKAFESILR 134
E + +K E +LR
Sbjct: 77 LRFKVFETVWSKIEKTIEDVLR 98
>At1g62170.1 68414.m07013 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
GI:9937311 from [Cucurbita maxima]; contains Pfam
profile PF00079: Serpin (serine protease inhibitor)
Length = 433
Score = 28.7 bits (61), Expect = 3.0
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +3
Query: 447 LKKDAVE-VFDADFEKVNFDNGAAAAGL-INKWVENKTNERIKDLL 578
L KD + F A F +V+F + A +N W + TN IKDLL
Sbjct: 174 LSKDLFKNFFSAAFAQVDFRSKAEEVRTEVNAWASSHTNGLIKDLL 219
>At3g62240.1 68416.m06992 zinc finger (C2H2 type) family protein
contains Pfam PF00096: Zinc finger, C2H2 type
Length = 812
Score = 28.3 bits (60), Expect = 4.0
Identities = 20/69 (28%), Positives = 29/69 (42%)
Frame = -2
Query: 361 DDTAENDERIVSSSGIPRLVNSSSCAGSVVPKVINASKYSADNGDDTTFFFLSSSLQNFA 182
+D+ +N SS P+ SS KV++ + ADN DT SS
Sbjct: 655 EDSKDNGRSAAQSSSQPKESQSSKKNKGKAVKVVDPKETLADNFMDTVRRLQSSQNPQEE 714
Query: 181 ENLVIAEDK 155
E I++DK
Sbjct: 715 EEEAISKDK 723
>At1g51170.1 68414.m05754 protein kinase family protein
Length = 404
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1
Query: 409 YTSRRVTMSSTQNLRRTLSRYSMQILKKLTSITEPQP 519
+ + V SS +LRR +R+ +QIL++L+ T P P
Sbjct: 52 FALKLVDKSSASSLRR--ARWEIQILRRLSDDTNPNP 86
>At4g29670.2 68417.m04227 thioredoxin family protein contains Pfam
profile PF00085: Thioredoxin
Length = 236
Score = 27.1 bits (57), Expect = 9.2
Identities = 16/33 (48%), Positives = 17/33 (51%)
Frame = +3
Query: 435 LDPKLKKDAVEVFDADFEKVNFDNGAAAAGLIN 533
L PKL K AVE D F KVNFD +N
Sbjct: 141 LFPKLCKTAVEHPDIVFLKVNFDENKPMCKSLN 173
>At4g29670.1 68417.m04226 thioredoxin family protein contains Pfam
profile PF00085: Thioredoxin
Length = 235
Score = 27.1 bits (57), Expect = 9.2
Identities = 16/33 (48%), Positives = 17/33 (51%)
Frame = +3
Query: 435 LDPKLKKDAVEVFDADFEKVNFDNGAAAAGLIN 533
L PKL K AVE D F KVNFD +N
Sbjct: 141 LFPKLCKTAVEHPDIVFLKVNFDENKPMCKSLN 173
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,291,188
Number of Sequences: 28952
Number of extensions: 215998
Number of successful extensions: 575
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 575
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1151426952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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