Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10h10f
(616 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF536542-1|AAN77183.1| 916|Homo sapiens SR-related CTD associat... 31 4.3
BX641059-1|CAE46030.1| 351|Homo sapiens hypothetical protein pr... 30 5.6
BC051715-1|AAH51715.1| 828|Homo sapiens neuroligin 3 protein. 30 5.6
BC032555-1|AAH32555.1| 823|Homo sapiens neuroligin 1 protein. 30 5.6
AF217413-2|AAF71232.1| 828|Homo sapiens neuroligin 3 isoform pr... 30 5.6
AF217411-1|AAF71230.1| 828|Homo sapiens neuroligin 3 isoform HN... 30 5.6
AB028993-1|BAA83022.2| 826|Homo sapiens KIAA1070 protein protein. 30 5.6
AF217413-1|AAF71233.1| 848|Homo sapiens neuroligin 3 isoform pr... 29 9.9
AF217412-1|AAF71231.1| 558|Homo sapiens neuroligin 3 isoform HN... 29 9.9
AB040913-1|BAA96004.1| 682|Homo sapiens KIAA1480 protein protein. 29 9.9
>AF536542-1|AAN77183.1| 916|Homo sapiens SR-related CTD associated
factor 6 protein.
Length = 916
Score = 30.7 bits (66), Expect = 4.3
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +2
Query: 2 SSAEYTKNASDACSRSISCSGGGTALQTSNGSTRART 112
SS Y+++ S +CSRS SCS + ++ + +R+R+
Sbjct: 760 SSGSYSRSRSRSCSRSSSCSRSRSRSRSRSSRSRSRS 796
>BX641059-1|CAE46030.1| 351|Homo sapiens hypothetical protein
protein.
Length = 351
Score = 30.3 bits (65), Expect = 5.6
Identities = 35/131 (26%), Positives = 52/131 (39%), Gaps = 2/131 (1%)
Frame = +3
Query: 90 TDLPEPGQLAFVLNEDEFEDYLDAYLALQQSEMLANQTRNDFRSGCTFRVNGDLGQPQPV 269
T + EP + LN + D A +Q E LA+ ND R +G +P V
Sbjct: 15 TYIQEPNEDCLYLNV--YVPTEDGSGAKKQGEDLAD---NDGDEDEDIRDSG--AKPVMV 67
Query: 270 YIHRGNYLSPTGN--TGQIRLNRGEQVLIACTGSGRTIRHPNVASNLAVGTVSCQNNNLV 443
YIH G+Y+ TGN G I + G ++I + + A G + +
Sbjct: 68 YIHGGSYMEGTGNMIDGSILASYGNVIVITLNYRVGVLGFLSTGDQAAKGNYGLL-DQIQ 126
Query: 444 TANWLRGNSAF 476
W+ N AF
Sbjct: 127 ALRWVSENIAF 137
>BC051715-1|AAH51715.1| 828|Homo sapiens neuroligin 3 protein.
Length = 828
Score = 30.3 bits (65), Expect = 5.6
Identities = 35/131 (26%), Positives = 52/131 (39%), Gaps = 2/131 (1%)
Frame = +3
Query: 90 TDLPEPGQLAFVLNEDEFEDYLDAYLALQQSEMLANQTRNDFRSGCTFRVNGDLGQPQPV 269
T + EP + LN + D A +Q E LA+ ND R +G +P V
Sbjct: 132 TYIQEPNEDCLYLNV--YVPTEDGSGAKKQGEDLAD---NDGDEDEDIRDSG--AKPVMV 184
Query: 270 YIHRGNYLSPTGN--TGQIRLNRGEQVLIACTGSGRTIRHPNVASNLAVGTVSCQNNNLV 443
YIH G+Y+ TGN G I + G ++I + + A G + +
Sbjct: 185 YIHGGSYMEGTGNMIDGSILASYGNVIVITLNYRVGVLGFLSTGDQAAKGNYGLL-DQIQ 243
Query: 444 TANWLRGNSAF 476
W+ N AF
Sbjct: 244 ALRWVSENIAF 254
>BC032555-1|AAH32555.1| 823|Homo sapiens neuroligin 1 protein.
Length = 823
Score = 30.3 bits (65), Expect = 5.6
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Frame = +3
Query: 246 DLGQPQPV--YIHRGNYLSPTGN--TGQIRLNRGEQVLI 350
D G P+PV YIH G+Y+ TGN G + + G ++I
Sbjct: 168 DSGGPKPVMVYIHGGSYMEGTGNLYDGSVLASYGNVIVI 206
>AF217413-2|AAF71232.1| 828|Homo sapiens neuroligin 3 isoform
protein.
Length = 828
Score = 30.3 bits (65), Expect = 5.6
Identities = 35/131 (26%), Positives = 52/131 (39%), Gaps = 2/131 (1%)
Frame = +3
Query: 90 TDLPEPGQLAFVLNEDEFEDYLDAYLALQQSEMLANQTRNDFRSGCTFRVNGDLGQPQPV 269
T + EP + LN + D A +Q E LA+ ND R +G +P V
Sbjct: 132 TYIQEPNEDCLYLNV--YVPTEDGSGAKKQGEDLAD---NDGDEDEDIRDSG--AKPVMV 184
Query: 270 YIHRGNYLSPTGN--TGQIRLNRGEQVLIACTGSGRTIRHPNVASNLAVGTVSCQNNNLV 443
YIH G+Y+ TGN G I + G ++I + + A G + +
Sbjct: 185 YIHGGSYMEGTGNMIDGSILASYGNVIVITLNYRVGVLGFLSTGDQAAKGNYGLL-DQIQ 243
Query: 444 TANWLRGNSAF 476
W+ N AF
Sbjct: 244 ALRWVSENIAF 254
>AF217411-1|AAF71230.1| 828|Homo sapiens neuroligin 3 isoform HNL3
protein.
Length = 828
Score = 30.3 bits (65), Expect = 5.6
Identities = 35/131 (26%), Positives = 52/131 (39%), Gaps = 2/131 (1%)
Frame = +3
Query: 90 TDLPEPGQLAFVLNEDEFEDYLDAYLALQQSEMLANQTRNDFRSGCTFRVNGDLGQPQPV 269
T + EP + LN + D A +Q E LA+ ND R +G +P V
Sbjct: 132 TYIQEPNEDCLYLNV--YVPTEDGSGAKKQGEDLAD---NDGDEDEDIRDSG--AKPVMV 184
Query: 270 YIHRGNYLSPTGN--TGQIRLNRGEQVLIACTGSGRTIRHPNVASNLAVGTVSCQNNNLV 443
YIH G+Y+ TGN G I + G ++I + + A G + +
Sbjct: 185 YIHGGSYMEGTGNMIDGSIPASYGNVIVITLNYRVGVLGFLSTGDQAAKGNYGLL-DQIQ 243
Query: 444 TANWLRGNSAF 476
W+ N AF
Sbjct: 244 ALRWVSENIAF 254
>AB028993-1|BAA83022.2| 826|Homo sapiens KIAA1070 protein protein.
Length = 826
Score = 30.3 bits (65), Expect = 5.6
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Frame = +3
Query: 246 DLGQPQPV--YIHRGNYLSPTGN--TGQIRLNRGEQVLI 350
D G P+PV YIH G+Y+ TGN G + + G ++I
Sbjct: 171 DSGGPKPVMVYIHGGSYMEGTGNLYDGSVLASYGNVIVI 209
>AF217413-1|AAF71233.1| 848|Homo sapiens neuroligin 3 isoform
protein.
Length = 848
Score = 29.5 bits (63), Expect = 9.9
Identities = 29/105 (27%), Positives = 43/105 (40%), Gaps = 2/105 (1%)
Frame = +3
Query: 168 ALQQSEMLANQTRNDFRSGCTFRVNGDLGQPQPVYIHRGNYLSPTGN--TGQIRLNRGEQ 341
A +Q E LA+ ND R +G +P VYIH G+Y+ TGN G I + G
Sbjct: 176 AKKQGEDLAD---NDGDEDEDIRDSG--AKPVMVYIHGGSYMEGTGNMIDGSILASYGNV 230
Query: 342 VLIACTGSGRTIRHPNVASNLAVGTVSCQNNNLVTANWLRGNSAF 476
++I + + A G + + W+ N AF
Sbjct: 231 IVITLNYRVGVLGFLSTGDQAAKGNYGLL-DQIQALRWVSENIAF 274
>AF217412-1|AAF71231.1| 558|Homo sapiens neuroligin 3 isoform HNL3s
protein.
Length = 558
Score = 29.5 bits (63), Expect = 9.9
Identities = 29/105 (27%), Positives = 43/105 (40%), Gaps = 2/105 (1%)
Frame = +3
Query: 168 ALQQSEMLANQTRNDFRSGCTFRVNGDLGQPQPVYIHRGNYLSPTGN--TGQIRLNRGEQ 341
A +Q E LA+ ND R +G +P VYIH G+Y+ TGN G I + G
Sbjct: 176 AKKQGEDLAD---NDGDEDEDIRDSG--AKPVMVYIHGGSYMEGTGNMIDGSILASYGNV 230
Query: 342 VLIACTGSGRTIRHPNVASNLAVGTVSCQNNNLVTANWLRGNSAF 476
++I + + A G + + W+ N AF
Sbjct: 231 IVITLNYRVGVLGFLSTGDQAAKGNYGLL-DQIQALRWVSENIAF 274
>AB040913-1|BAA96004.1| 682|Homo sapiens KIAA1480 protein protein.
Length = 682
Score = 29.5 bits (63), Expect = 9.9
Identities = 29/105 (27%), Positives = 43/105 (40%), Gaps = 2/105 (1%)
Frame = +3
Query: 168 ALQQSEMLANQTRNDFRSGCTFRVNGDLGQPQPVYIHRGNYLSPTGN--TGQIRLNRGEQ 341
A +Q E LA+ ND R +G +P VYIH G+Y+ TGN G I + G
Sbjct: 10 AKKQGEDLAD---NDGDEDEDIRDSG--AKPVMVYIHGGSYMEGTGNMIDGSILASYGNV 64
Query: 342 VLIACTGSGRTIRHPNVASNLAVGTVSCQNNNLVTANWLRGNSAF 476
++I + + A G + + W+ N AF
Sbjct: 65 IVITLNYRVGVLGFLSTGDQAAKGNYGLL-DQIQALRWVSENIAF 108
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,820,585
Number of Sequences: 237096
Number of extensions: 1899154
Number of successful extensions: 8479
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 8302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8475
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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