Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10h10f
         (616 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29614-6|AAA68809.2|  378|Caenorhabditis elegans Hypothetical pr...    28   4.6  
Z49207-4|CAA89073.1|  195|Caenorhabditis elegans Hypothetical pr...    28   6.1  
U64599-11|ABD94099.1|  324|Caenorhabditis elegans Regulator of g...    27   8.1  
U64599-10|AAL11463.1|  424|Caenorhabditis elegans Regulator of g...    27   8.1  
U64599-9|AAL65791.1|  782|Caenorhabditis elegans Regulator of g ...    27   8.1  
U64599-7|AAL11462.1|  819|Caenorhabditis elegans Regulator of g ...    27   8.1  
AY569308-1|AAS75452.1|  819|Caenorhabditis elegans RGS-7A protein.     27   8.1  
AB080201-1|BAB85494.1|  782|Caenorhabditis elegans C2-RGS protei...    27   8.1  

>U29614-6|AAA68809.2|  378|Caenorhabditis elegans Hypothetical
           protein F18E9.3 protein.
          Length = 378

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +3

Query: 255 QPQPVYIHRGNYLSPTGN 308
           QP+PV IH G Y  PT N
Sbjct: 296 QPKPVVIHTGRYSGPTYN 313


>Z49207-4|CAA89073.1|  195|Caenorhabditis elegans Hypothetical
           protein R07E3.7 protein.
          Length = 195

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = -1

Query: 415 VPTARLEATLG*RIVRPDPVQAIRTCSPRLR 323
           +PT R E+T+G R   P+P+  I T SP  R
Sbjct: 39  LPT-RAESTIGIRPKIPNPIYTINTASPETR 68


>U64599-11|ABD94099.1|  324|Caenorhabditis elegans Regulator of g
           protein signalingprotein 7, isoform e protein.
          Length = 324

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
 Frame = +3

Query: 156 DAYLALQQSEMLANQTRN--DFRSGCTFRVNGDLGQPQPVYIHRGNYLSPTGNTGQ 317
           D Y +   S+M    T N  D+ S  +   NG  G P+ + +HR    S T  T +
Sbjct: 18  DYYRSTGSSDMRGRSTNNLLDYTSASS-STNGSAGGPEKLKLHRATLPSITTTTSE 72


>U64599-10|AAL11463.1|  424|Caenorhabditis elegans Regulator of g
           protein signalingprotein 7, isoform c protein.
          Length = 424

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
 Frame = +3

Query: 156 DAYLALQQSEMLANQTRN--DFRSGCTFRVNGDLGQPQPVYIHRGNYLSPTGNTGQ 317
           D Y +   S+M    T N  D+ S  +   NG  G P+ + +HR    S T  T +
Sbjct: 118 DYYRSTGSSDMRGRSTNNLLDYTSASS-STNGSAGGPEKLKLHRATLPSITTTTSE 172


>U64599-9|AAL65791.1|  782|Caenorhabditis elegans Regulator of g
           protein signalingprotein 7, isoform b protein.
          Length = 782

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
 Frame = +3

Query: 156 DAYLALQQSEMLANQTRN--DFRSGCTFRVNGDLGQPQPVYIHRGNYLSPTGNTGQ 317
           D Y +   S+M    T N  D+ S  +   NG  G P+ + +HR    S T  T +
Sbjct: 476 DYYRSTGSSDMRGRSTNNLLDYTSASS-STNGSAGGPEKLKLHRATLPSITTTTSE 530


>U64599-7|AAL11462.1|  819|Caenorhabditis elegans Regulator of g
           protein signalingprotein 7, isoform a protein.
          Length = 819

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
 Frame = +3

Query: 156 DAYLALQQSEMLANQTRN--DFRSGCTFRVNGDLGQPQPVYIHRGNYLSPTGNTGQ 317
           D Y +   S+M    T N  D+ S  +   NG  G P+ + +HR    S T  T +
Sbjct: 513 DYYRSTGSSDMRGRSTNNLLDYTSASS-STNGSAGGPEKLKLHRATLPSITTTTSE 567


>AY569308-1|AAS75452.1|  819|Caenorhabditis elegans RGS-7A protein.
          Length = 819

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
 Frame = +3

Query: 156 DAYLALQQSEMLANQTRN--DFRSGCTFRVNGDLGQPQPVYIHRGNYLSPTGNTGQ 317
           D Y +   S+M    T N  D+ S  +   NG  G P+ + +HR    S T  T +
Sbjct: 513 DYYRSTGSSDMRGRSTNNLLDYTSASS-STNGSAGGPEKLKLHRATLPSITTTTSE 567


>AB080201-1|BAB85494.1|  782|Caenorhabditis elegans C2-RGS protein
           protein.
          Length = 782

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
 Frame = +3

Query: 156 DAYLALQQSEMLANQTRN--DFRSGCTFRVNGDLGQPQPVYIHRGNYLSPTGNTGQ 317
           D Y +   S+M    T N  D+ S  +   NG  G P+ + +HR    S T  T +
Sbjct: 476 DYYRSTGSSDMRGRSTNNLLDYTSASS-STNGSAGGPEKLKLHRATLPSITTTTSE 530


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,988,923
Number of Sequences: 27780
Number of extensions: 294107
Number of successful extensions: 888
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 888
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)