Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10h06r
         (412 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A4I4M3 Cluster: Putative uncharacterized protein; n=3; ...    34   1.3  
UniRef50_Q14MS8 Cluster: Transposase of is30 family protein; n=5...    31   6.9  
UniRef50_A7QWP2 Cluster: Chromosome chr4 scaffold_205, whole gen...    31   9.1  
UniRef50_Q7PQF3 Cluster: ENSANGP00000011318; n=1; Anopheles gamb...    31   9.1  

>UniRef50_A4I4M3 Cluster: Putative uncharacterized protein; n=3;
           Leishmania|Rep: Putative uncharacterized protein -
           Leishmania infantum
          Length = 680

 Score = 33.9 bits (74), Expect = 1.3
 Identities = 18/48 (37%), Positives = 25/48 (52%)
 Frame = +1

Query: 241 HVCGNVLVQLNTVDIAVVLFRSCVTIPGIFLKIYTFTIVLNKFHSHLT 384
           +VCG VL+Q         +F    T+PG  L IY F +++NK H   T
Sbjct: 434 YVCG-VLLQYLNCRAWKNIFTCSFTLPGAMLLIYIFILIINKAHGATT 480


>UniRef50_Q14MS8 Cluster: Transposase of is30 family protein; n=5;
           Spiroplasma citri|Rep: Transposase of is30 family
           protein - Spiroplasma citri
          Length = 330

 Score = 31.5 bits (68), Expect = 6.9
 Identities = 14/50 (28%), Positives = 27/50 (54%)
 Frame = -2

Query: 348 ECIYFKKYSRNCHTRPKQHNRYIYCIKLNKNISTDMGNACAACLVNGIAK 199
           +CI  K++   C T  ++ + Y  C KLN++ S ++  A  + + N + K
Sbjct: 184 DCIVGKEHQSACLTITEEKSLYTICFKLNQHNSEEVNKALKSIIRNKLYK 233


>UniRef50_A7QWP2 Cluster: Chromosome chr4 scaffold_205, whole genome
           shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
           chr4 scaffold_205, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 243

 Score = 31.1 bits (67), Expect = 9.1
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -1

Query: 127 RESGCCSYVIHWECLSCQYYCTSYLKNDEGMIH 29
           R SGC S  + W+  +C  YC + L  + G+ H
Sbjct: 189 RTSGCLSNFLLWQATTCLLYCPTALWPEVGLRH 221


>UniRef50_Q7PQF3 Cluster: ENSANGP00000011318; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000011318 - Anopheles gambiae
           str. PEST
          Length = 1382

 Score = 31.1 bits (67), Expect = 9.1
 Identities = 21/63 (33%), Positives = 31/63 (49%)
 Frame = +1

Query: 217 KTSSTRITHVCGNVLVQLNTVDIAVVLFRSCVTIPGIFLKIYTFTIVLNKFHSHLTVTLR 396
           +T S R+T       + L +V   +VL  SCVT+ G   K Y  T +L+ FH    V++ 
Sbjct: 628 ETYSARLTQYYQENPISLQSVRAGMVLKGSCVTVNG---KPYV-TPLLSDFHGRFPVSIP 683

Query: 397 SGW 405
             W
Sbjct: 684 PKW 686


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 382,147,440
Number of Sequences: 1657284
Number of extensions: 6781546
Number of successful extensions: 15462
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15456
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 18619342852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)