Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10h06r
(412 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z97054-12|CAI42656.1| 3407|Homo sapiens upstream regulatory elem... 29 6.0
Z97054-10|CAI42654.1| 4374|Homo sapiens upstream regulatory elem... 29 6.0
Z94044-4|CAI42354.1| 4374|Homo sapiens upstream regulatory eleme... 29 6.0
DQ097177-1|AAY98258.1| 4374|Homo sapiens Mcl-1 ubiquitin ligase ... 29 6.0
AY929612-1|AAX24125.1| 4374|Homo sapiens LASU1 protein. 29 6.0
AY772009-1|AAV90838.1| 4374|Homo sapiens ARF-binding protein 1 p... 29 6.0
AL592046-4|CAI39581.1| 3407|Homo sapiens upstream regulatory ele... 29 6.0
AL592046-3|CAI39580.1| 4374|Homo sapiens upstream regulatory ele... 29 6.0
AB071605-1|BAC06833.1| 3360|Homo sapiens HECT domain protein LAS... 29 6.0
AB046798-1|BAB13404.1| 1202|Homo sapiens KIAA1578 protein protein. 29 6.0
AB002310-1|BAA20771.2| 3192|Homo sapiens KIAA0312 protein. 29 6.0
>Z97054-12|CAI42656.1| 3407|Homo sapiens upstream regulatory element
binding protein 1 (UREB1) protein.
Length = 3407
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 214 DKTSSTRITHVCGNVLVQLNTVDIAVVLFRSCVTIPGI 327
+K +S T + G +L+Q T D+ VL R+CV++ G+
Sbjct: 765 EKETSLEETKI-GEILIQGLTEDMVTVLIRACVSMLGV 801
>Z97054-10|CAI42654.1| 4374|Homo sapiens upstream regulatory element
binding protein 1 (UREB1) protein.
Length = 4374
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 214 DKTSSTRITHVCGNVLVQLNTVDIAVVLFRSCVTIPGI 327
+K +S T + G +L+Q T D+ VL R+CV++ G+
Sbjct: 1732 EKETSLEETKI-GEILIQGLTEDMVTVLIRACVSMLGV 1768
>Z94044-4|CAI42354.1| 4374|Homo sapiens upstream regulatory element
binding protein 1 (UREB1) protein.
Length = 4374
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 214 DKTSSTRITHVCGNVLVQLNTVDIAVVLFRSCVTIPGI 327
+K +S T + G +L+Q T D+ VL R+CV++ G+
Sbjct: 1732 EKETSLEETKI-GEILIQGLTEDMVTVLIRACVSMLGV 1768
>DQ097177-1|AAY98258.1| 4374|Homo sapiens Mcl-1 ubiquitin ligase
protein.
Length = 4374
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 214 DKTSSTRITHVCGNVLVQLNTVDIAVVLFRSCVTIPGI 327
+K +S T + G +L+Q T D+ VL R+CV++ G+
Sbjct: 1732 EKETSLEETKI-GEILIQGLTEDMVTVLIRACVSMLGV 1768
>AY929612-1|AAX24125.1| 4374|Homo sapiens LASU1 protein.
Length = 4374
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 214 DKTSSTRITHVCGNVLVQLNTVDIAVVLFRSCVTIPGI 327
+K +S T + G +L+Q T D+ VL R+CV++ G+
Sbjct: 1732 EKETSLEETKI-GEILIQGLTEDMVTVLIRACVSMLGV 1768
>AY772009-1|AAV90838.1| 4374|Homo sapiens ARF-binding protein 1
protein.
Length = 4374
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 214 DKTSSTRITHVCGNVLVQLNTVDIAVVLFRSCVTIPGI 327
+K +S T + G +L+Q T D+ VL R+CV++ G+
Sbjct: 1732 EKETSLEETKI-GEILIQGLTEDMVTVLIRACVSMLGV 1768
>AL592046-4|CAI39581.1| 3407|Homo sapiens upstream regulatory
element binding protein 1 (UREB1) protein.
Length = 3407
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 214 DKTSSTRITHVCGNVLVQLNTVDIAVVLFRSCVTIPGI 327
+K +S T + G +L+Q T D+ VL R+CV++ G+
Sbjct: 765 EKETSLEETKI-GEILIQGLTEDMVTVLIRACVSMLGV 801
>AL592046-3|CAI39580.1| 4374|Homo sapiens upstream regulatory element
binding protein 1 (UREB1) protein.
Length = 4374
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 214 DKTSSTRITHVCGNVLVQLNTVDIAVVLFRSCVTIPGI 327
+K +S T + G +L+Q T D+ VL R+CV++ G+
Sbjct: 1732 EKETSLEETKI-GEILIQGLTEDMVTVLIRACVSMLGV 1768
>AB071605-1|BAC06833.1| 3360|Homo sapiens HECT domain protein LASU1
protein.
Length = 3360
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 214 DKTSSTRITHVCGNVLVQLNTVDIAVVLFRSCVTIPGI 327
+K +S T + G +L+Q T D+ VL R+CV++ G+
Sbjct: 718 EKETSLEETKI-GEILIQGLTEDMVTVLIRACVSMLGV 754
>AB046798-1|BAB13404.1| 1202|Homo sapiens KIAA1578 protein protein.
Length = 1202
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 214 DKTSSTRITHVCGNVLVQLNTVDIAVVLFRSCVTIPGI 327
+K +S T + G +L+Q T D+ VL R+CV++ G+
Sbjct: 487 EKETSLEETKI-GEILIQGLTEDMVTVLIRACVSMLGV 523
>AB002310-1|BAA20771.2| 3192|Homo sapiens KIAA0312 protein.
Length = 3192
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 214 DKTSSTRITHVCGNVLVQLNTVDIAVVLFRSCVTIPGI 327
+K +S T + G +L+Q T D+ VL R+CV++ G+
Sbjct: 567 EKETSLEETKI-GEILIQGLTEDMVTVLIRACVSMLGV 603
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,902,052
Number of Sequences: 237096
Number of extensions: 1055818
Number of successful extensions: 2174
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2174
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3030544982
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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