Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10h04r
         (714 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0344 - 22419152-22419250,22419460-22419554,22419952-224201...   100   1e-21
04_03_0803 - 19835284-19836050,19836337-19836418                       32   0.52 
05_02_0122 - 6840840-6841307                                           31   0.91 
07_03_1462 + 26716197-26716484,26716618-26716746,26716963-267170...    29   4.8  
07_03_1529 + 27491963-27492465,27493045-27493154,27493384-274935...    28   6.4  
02_02_0432 - 10165098-10165310,10165431-10165622                       28   8.5  

>09_06_0344 - 22419152-22419250,22419460-22419554,22419952-22420108,
            22420825-22420869,22421080-22421211,22421496-22421594,
            22421690-22421785,22421968-22422149,22422242-22422494,
            22422867-22422974,22423037-22423094,22423462-22423613,
            22423698-22423792,22424172-22424287,22424369-22424495,
            22424565-22424661,22424745-22424913,22425879-22426027
          Length = 742

 Score =  100 bits (240), Expect = 1e-21
 Identities = 67/230 (29%), Positives = 111/230 (48%), Gaps = 9/230 (3%)
 Frame = -1

Query: 702  MSEVPSKCVSSVRQVHVKAHVEYIELEGRCDGESLLRVVSQTKPWAVVGLRASEAALHTL 523
            +   PSK +S+   V VK  + Y++ EGR DG S+  V++   P  +V +  S  A   L
Sbjct: 521  LDSTPSKVISNEMTVQVKCSLAYMDFEGRSDGRSVKSVIAHVAPLKLVLVHGSAEATEHL 580

Query: 522  KKHCESEGIEKVFLPSVGETVDATTESHIYQVKLTDGLMRGLVWRQAGDAELAWLSAVVA 343
            K HC       V+ P + ET+D T++   Y+V+L++ LM  ++ ++ G+ E+AW+ A V 
Sbjct: 581  KMHCSKNSDLHVYAPQIEETIDVTSDLCAYKVQLSEKLMSNVISKKLGEHEIAWVDAEVG 640

Query: 342  PRTHARESDAAPEEGGGAVSLEAGAGRPRAAAFVNTVXXXXXXXXXXXXXLQPDLGAGTL 163
             +T  + +   P     A       G  + A F   +             LQ +   G L
Sbjct: 641  -KTDDKLT-LLPPSSTPAAHKSVLVGDLKLADFKQFL-----ANKGLRDFLQVEFAGGAL 693

Query: 162  TCCSGTLAVRRMENG---------QVSLEGVLSEEYYKVRELLYEQFAIV 40
              C   + +R++ +          Q+ +EG L E+YYK+RELLY QF ++
Sbjct: 694  R-CGEYITLRKIGDAGQKGSTGSQQIVIEGPLCEDYYKIRELLYSQFYLL 742


>04_03_0803 - 19835284-19836050,19836337-19836418
          Length = 282

 Score = 31.9 bits (69), Expect = 0.52
 Identities = 25/77 (32%), Positives = 28/77 (36%), Gaps = 5/77 (6%)
 Frame = -2

Query: 563 WWGSGPARRRCTPSKNIVSLKESKRCSYRPL-----GKPSTPRQSHTSIR*N*RTG*CGA 399
           W GS P +  C P       K +K C Y        G   TP     S         CG 
Sbjct: 157 WTGSCPTQCHCCPKPPPPETK-TKACEYCSRDHCHGGCKITPPPPPPSRCGGCDHADCGG 215

Query: 398 WCGGRPGTPSWPGCPPS 348
           WCGG+P     P  PPS
Sbjct: 216 WCGGQPPINCPPPPPPS 232


>05_02_0122 - 6840840-6841307
          Length = 155

 Score = 31.1 bits (67), Expect = 0.91
 Identities = 16/43 (37%), Positives = 20/43 (46%)
 Frame = -1

Query: 393 WRQAGDAELAWLSAVVAPRTHARESDAAPEEGGGAVSLEAGAG 265
           WR A    + W +A    R  A     A E GGG  ++E GAG
Sbjct: 53  WRTAAPV-VRWRTAAATARWRAEAGRGAGEGGGGGGAVEGGAG 94


>07_03_1462 +
           26716197-26716484,26716618-26716746,26716963-26717055,
           26717581-26717721,26718021-26718089,26718207-26718290,
           26718784-26718964,26719055-26719171,26719245-26719303,
           26719595-26719729,26719865-26720014,26720170-26720208
          Length = 494

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
 Frame = -1

Query: 708 EEMSEVPSKCVSSVRQVHV-----KAHVEYIELEGRCDGESLLRVVSQT 577
           E+++E  S CV  ++++H+     +  V   ELEG     S+LR+VSQ+
Sbjct: 253 EQLAEKSSNCVHLLKELHLHQSYEENDVSSYELEGLESLGSMLRIVSQS 301


>07_03_1529 +
           27491963-27492465,27493045-27493154,27493384-27493510,
           27494082-27494430,27494975-27495251,27496236-27496333,
           27498090-27498214,27498270-27498326,27498328-27498370,
           27498581-27498667,27498802-27498882,27499735-27499901,
           27499987-27500098,27500188-27500390,27500473-27500607,
           27501106-27501205
          Length = 857

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -1

Query: 549 ASEAALHTLKKHCESEGIEKVFLPSVGETVDATTESHIYQVK 424
           A   AL  LK  CE +  E V + +V  T+    + H YQ+K
Sbjct: 400 ADRYALERLKLLCELKLCEDVAINTVANTLALAEQHHCYQLK 441


>02_02_0432 - 10165098-10165310,10165431-10165622
          Length = 134

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -1

Query: 621 GRCDGESLLRVVSQTKPWAVVGLRASEAALHTL 523
           GRCD  SL R    T  WA+ G++ +    H L
Sbjct: 49  GRCDRNSLGRSGGHTMRWALGGMKQTLLQTHAL 81


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,478,173
Number of Sequences: 37544
Number of extensions: 278114
Number of successful extensions: 1094
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1093
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1851002996
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)