Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10h04r
         (714 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF160933-1|AAD46873.1|  756|Drosophila melanogaster LD14168p pro...   165   4e-41
AE014297-4305|AAN14148.1|  664|Drosophila melanogaster CG1957-PB...   165   4e-41
AE014297-4304|AAF56844.1|  756|Drosophila melanogaster CG1957-PA...   165   4e-41
AY061097-1|AAL28645.1|  597|Drosophila melanogaster LD08814p pro...    33   0.29 
AE014297-4430|AAF56931.1|  597|Drosophila melanogaster CG1972-PA...    33   0.29 

>AF160933-1|AAD46873.1|  756|Drosophila melanogaster LD14168p protein.
          Length = 756

 Score =  165 bits (402), Expect = 4e-41
 Identities = 89/235 (37%), Positives = 137/235 (58%), Gaps = 11/235 (4%)
 Frame = -1

Query: 711  DEEMSEVPSKCVSSVRQVHVKAHVEYIELEGRCDGESLLRVVSQTKPWAVVGLRASEAAL 532
            D ++ E P+K +S  + + V A V+ I+ EGR DGES+L+++SQ +P  V+ +  +    
Sbjct: 523  DVQLLEKPTKLISQRKTIEVNAQVQRIDFEGRSDGESMLKILSQLRPRRVIVIHGTAEGT 582

Query: 531  HTLKKHCESEGIEKVFLPSVGETVDATTESHIYQVKLTDGLMRGLVWRQAGDAELAW--- 361
              + +HCE     +VF P  GE +D T+E HIYQV+LT+GL+  L +++  DAE+AW   
Sbjct: 583  QVVARHCEQNVGARVFTPQKGEIIDVTSEIHIYQVRLTEGLVSQLQFQKGKDAEVAWVDG 642

Query: 360  -----LSAVVAPRTHARESDAAPEEGGGAVSLEAGAGRP---RAAAFVNTVXXXXXXXXX 205
                 + A+ AP     E DA+ +E G  ++LE  A        +  +N +         
Sbjct: 643  RLGMRVKAIEAPMDVTVEQDASVQE-GKTLTLETLADDEIPIHNSVLINELKLSDFKQTL 701

Query: 204  XXXXLQPDLGAGTLTCCSGTLAVRRMENGQVSLEGVLSEEYYKVRELLYEQFAIV 40
                +  +   G L C +GTLA+RR++ G+V++EG LSEEYYK+RELLYEQ+AIV
Sbjct: 702  MRNNINSEFSGGVLWCSNGTLALRRVDAGKVAMEGCLSEEYYKIRELLYEQYAIV 756


>AE014297-4305|AAN14148.1|  664|Drosophila melanogaster CG1957-PB,
            isoform B protein.
          Length = 664

 Score =  165 bits (402), Expect = 4e-41
 Identities = 89/235 (37%), Positives = 137/235 (58%), Gaps = 11/235 (4%)
 Frame = -1

Query: 711  DEEMSEVPSKCVSSVRQVHVKAHVEYIELEGRCDGESLLRVVSQTKPWAVVGLRASEAAL 532
            D ++ E P+K +S  + + V A V+ I+ EGR DGES+L+++SQ +P  V+ +  +    
Sbjct: 431  DVQLLEKPTKLISQRKTIEVNAQVQRIDFEGRSDGESMLKILSQLRPRRVIVIHGTAEGT 490

Query: 531  HTLKKHCESEGIEKVFLPSVGETVDATTESHIYQVKLTDGLMRGLVWRQAGDAELAW--- 361
              + +HCE     +VF P  GE +D T+E HIYQV+LT+GL+  L +++  DAE+AW   
Sbjct: 491  QVVARHCEQNVGARVFTPQKGEIIDVTSEIHIYQVRLTEGLVSQLQFQKGKDAEVAWVDG 550

Query: 360  -----LSAVVAPRTHARESDAAPEEGGGAVSLEAGAGRP---RAAAFVNTVXXXXXXXXX 205
                 + A+ AP     E DA+ +E G  ++LE  A        +  +N +         
Sbjct: 551  RLGMRVKAIEAPMDVTVEQDASVQE-GKTLTLETLADDEIPIHNSVLINELKLSDFKQTL 609

Query: 204  XXXXLQPDLGAGTLTCCSGTLAVRRMENGQVSLEGVLSEEYYKVRELLYEQFAIV 40
                +  +   G L C +GTLA+RR++ G+V++EG LSEEYYK+RELLYEQ+AIV
Sbjct: 610  MRNNINSEFSGGVLWCSNGTLALRRVDAGKVAMEGCLSEEYYKIRELLYEQYAIV 664


>AE014297-4304|AAF56844.1|  756|Drosophila melanogaster CG1957-PA,
            isoform A protein.
          Length = 756

 Score =  165 bits (402), Expect = 4e-41
 Identities = 89/235 (37%), Positives = 137/235 (58%), Gaps = 11/235 (4%)
 Frame = -1

Query: 711  DEEMSEVPSKCVSSVRQVHVKAHVEYIELEGRCDGESLLRVVSQTKPWAVVGLRASEAAL 532
            D ++ E P+K +S  + + V A V+ I+ EGR DGES+L+++SQ +P  V+ +  +    
Sbjct: 523  DVQLLEKPTKLISQRKTIEVNAQVQRIDFEGRSDGESMLKILSQLRPRRVIVIHGTAEGT 582

Query: 531  HTLKKHCESEGIEKVFLPSVGETVDATTESHIYQVKLTDGLMRGLVWRQAGDAELAW--- 361
              + +HCE     +VF P  GE +D T+E HIYQV+LT+GL+  L +++  DAE+AW   
Sbjct: 583  QVVARHCEQNVGARVFTPQKGEIIDVTSEIHIYQVRLTEGLVSQLQFQKGKDAEVAWVDG 642

Query: 360  -----LSAVVAPRTHARESDAAPEEGGGAVSLEAGAGRP---RAAAFVNTVXXXXXXXXX 205
                 + A+ AP     E DA+ +E G  ++LE  A        +  +N +         
Sbjct: 643  RLGMRVKAIEAPMDVTVEQDASVQE-GKTLTLETLADDEIPIHNSVLINELKLSDFKQTL 701

Query: 204  XXXXLQPDLGAGTLTCCSGTLAVRRMENGQVSLEGVLSEEYYKVRELLYEQFAIV 40
                +  +   G L C +GTLA+RR++ G+V++EG LSEEYYK+RELLYEQ+AIV
Sbjct: 702  MRNNINSEFSGGVLWCSNGTLALRRVDAGKVAMEGCLSEEYYKIRELLYEQYAIV 756


>AY061097-1|AAL28645.1|  597|Drosophila melanogaster LD08814p
           protein.
          Length = 597

 Score = 33.5 bits (73), Expect = 0.29
 Identities = 16/71 (22%), Positives = 34/71 (47%)
 Frame = -1

Query: 660 VHVKAHVEYIELEGRCDGESLLRVVSQTKPWAVVGLRASEAALHTLKKHCESEGIEKVFL 481
           V VK  VEY+      D + +++++   +P  V+ +      +  L+   + E   + ++
Sbjct: 378 VEVKMAVEYMSFSAHADAKGIMQLIQNCEPKNVMLVHGEAGKMKFLRSKIKDEFNLETYM 437

Query: 480 PSVGETVDATT 448
           P+ GET   +T
Sbjct: 438 PANGETCVIST 448


>AE014297-4430|AAF56931.1|  597|Drosophila melanogaster CG1972-PA
           protein.
          Length = 597

 Score = 33.5 bits (73), Expect = 0.29
 Identities = 16/71 (22%), Positives = 34/71 (47%)
 Frame = -1

Query: 660 VHVKAHVEYIELEGRCDGESLLRVVSQTKPWAVVGLRASEAALHTLKKHCESEGIEKVFL 481
           V VK  VEY+      D + +++++   +P  V+ +      +  L+   + E   + ++
Sbjct: 378 VEVKMAVEYMSFSAHADAKGIMQLIQNCEPKNVMLVHGEAGKMKFLRSKIKDEFNLETYM 437

Query: 480 PSVGETVDATT 448
           P+ GET   +T
Sbjct: 438 PANGETCVIST 448


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,470,874
Number of Sequences: 53049
Number of extensions: 443947
Number of successful extensions: 1494
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1489
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3170136354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)