Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10h04f
(635 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9V3D6 Cluster: Probable cleavage and polyadenylation s... 253 2e-66
UniRef50_Q9P2I0 Cluster: Cleavage and polyadenylation specificit... 246 3e-64
UniRef50_Q3UGU6 Cluster: Melanocyte cDNA, RIKEN full-length enri... 243 3e-63
UniRef50_A7RPX1 Cluster: Predicted protein; n=1; Nematostella ve... 233 3e-60
UniRef50_Q4S732 Cluster: Chromosome 14 SCAF14723, whole genome s... 221 9e-57
UniRef50_O17403 Cluster: Probable cleavage and polyadenylation s... 203 2e-51
UniRef50_Q8WPK6 Cluster: Similar to cleavage and polyadenylation... 191 1e-47
UniRef50_Q9LKF9 Cluster: Cleavage and polyadenylation specificit... 173 2e-42
UniRef50_Q55BS1 Cluster: Putative uncharacterized protein; n=1; ... 170 2e-41
UniRef50_Q01GI5 Cluster: Polyadenylation cleavage/specificity fa... 159 4e-38
UniRef50_A4RR19 Cluster: Predicted protein; n=1; Ostreococcus lu... 157 2e-37
UniRef50_A2EDT7 Cluster: Putative uncharacterized protein; n=1; ... 130 3e-29
UniRef50_UPI000049A022 Cluster: cleavage and polyadenylation spe... 85 1e-15
UniRef50_Q4PAM2 Cluster: Putative uncharacterized protein; n=1; ... 77 4e-13
UniRef50_O74740 Cluster: Cleavage factor two Cft2/polyadenylatio... 74 3e-12
UniRef50_Q2UQF0 Cluster: MRNA cleavage and polyadenylation facto... 71 2e-11
UniRef50_A2R7F5 Cluster: Contig An16c0120, complete genome. prec... 71 2e-11
UniRef50_Q5KIP3 Cluster: Cleavage and polyadenylation specificit... 71 2e-11
UniRef50_A7F0N0 Cluster: Putative uncharacterized protein; n=2; ... 71 3e-11
UniRef50_A6R733 Cluster: Putative uncharacterized protein; n=1; ... 70 4e-11
UniRef50_A5DXK9 Cluster: Putative uncharacterized protein; n=1; ... 70 4e-11
UniRef50_A3GHD1 Cluster: Predicted protein; n=3; Saccharomycetal... 66 5e-10
UniRef50_Q86A79 Cluster: Similar to Homo sapiens (Human). Cleava... 66 9e-10
UniRef50_UPI00015BD54C Cluster: UPI00015BD54C related cluster; n... 65 1e-09
UniRef50_Q8SUE4 Cluster: Putative uncharacterized protein ECU10_... 65 2e-09
UniRef50_Q6BSP2 Cluster: Similar to CA3384|IPF8362 Candida albic... 64 4e-09
UniRef50_Q0UZX3 Cluster: Putative uncharacterized protein; n=1; ... 63 6e-09
UniRef50_Q4QA79 Cluster: Cleavage and polyadenylation specificit... 62 1e-08
UniRef50_O13794 Cluster: Endoribonuclease ysh1; n=2; Ascomycota|... 62 1e-08
UniRef50_Q12102 Cluster: Protein CFT2; n=4; Saccharomyces cerevi... 60 4e-08
UniRef50_Q18IP5 Cluster: Predicted metal-dependent RNase, consis... 59 8e-08
UniRef50_Q750X1 Cluster: AGL182Cp; n=1; Eremothecium gossypii|Re... 58 2e-07
UniRef50_Q387M8 Cluster: Cleavage and polyadenylation specificit... 57 3e-07
UniRef50_Q5TA45 Cluster: Integrator complex subunit 11; n=29; Eu... 57 3e-07
UniRef50_A7APS1 Cluster: Putative uncharacterized protein; n=1; ... 56 5e-07
UniRef50_Q7S0J8 Cluster: Putative uncharacterized protein NCU068... 56 5e-07
UniRef50_Q74MJ3 Cluster: NEQ076; n=1; Nanoarchaeum equitans|Rep:... 56 7e-07
UniRef50_A3ERC5 Cluster: Putative RNA-processing exonuclease; n=... 56 9e-07
UniRef50_A4CGY6 Cluster: Putative uncharacterized protein; n=4; ... 55 1e-06
UniRef50_Q9U3K2 Cluster: Putative uncharacterized protein; n=2; ... 55 1e-06
UniRef50_Q8GUU3 Cluster: FEG protein; n=8; Magnoliophyta|Rep: FE... 55 2e-06
UniRef50_A6NEN7 Cluster: Uncharacterized protein CPSF3L; n=16; T... 54 2e-06
UniRef50_A4XI93 Cluster: Beta-lactamase domain protein; n=1; Cal... 54 3e-06
UniRef50_A4S2M5 Cluster: Predicted protein; n=4; Viridiplantae|R... 54 3e-06
UniRef50_Q5TA51 Cluster: Cleavage and polyadenylation specific f... 54 3e-06
UniRef50_Q4UDL0 Cluster: Putative uncharacterized protein; n=3; ... 54 4e-06
UniRef50_Q9YEQ9 Cluster: Putative exonuclease; n=1; Aeropyrum pe... 54 4e-06
UniRef50_Q5BEP0 Cluster: Endoribonuclease ysh1; n=15; Pezizomyco... 54 4e-06
UniRef50_Q6FW78 Cluster: Candida glabrata strain CBS138 chromoso... 53 5e-06
UniRef50_Q4Q2K1 Cluster: Cleavage and polyadenylation specificit... 53 7e-06
UniRef50_A2FCF8 Cluster: RNA-metabolising metallo-beta-lactamase... 53 7e-06
UniRef50_A0BGT5 Cluster: Chromosome undetermined scaffold_106, w... 53 7e-06
UniRef50_A1RWY8 Cluster: Beta-lactamase domain protein; n=1; The... 52 1e-05
UniRef50_A5ZRP6 Cluster: Putative uncharacterized protein; n=4; ... 52 2e-05
UniRef50_A3HWA3 Cluster: Metallo-beta-lactamase family protein; ... 51 3e-05
UniRef50_A2D958 Cluster: RNA-metabolising metallo-beta-lactamase... 51 3e-05
UniRef50_Q6CNJ8 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 51 3e-05
UniRef50_Q2LYC2 Cluster: Metallo-beta-lactamase protein; n=6; De... 50 4e-05
UniRef50_A5N1D0 Cluster: Putative uncharacterized protein; n=1; ... 50 4e-05
UniRef50_Q06224 Cluster: Endoribonuclease YSH1; n=10; Fungi/Meta... 50 4e-05
UniRef50_Q95PY8 Cluster: Putative uncharacterized protein; n=2; ... 50 5e-05
UniRef50_A7TEK7 Cluster: Putative uncharacterized protein; n=1; ... 50 5e-05
UniRef50_Q58633 Cluster: Uncharacterized protein MJ1236; n=16; E... 50 6e-05
UniRef50_Q24CH6 Cluster: Putative uncharacterized protein; n=1; ... 49 8e-05
UniRef50_A7DQ83 Cluster: Beta-lactamase domain protein; n=1; Can... 49 8e-05
UniRef50_Q5CRW9 Cluster: CPSF metallobeta-lactamase; n=2; Crypto... 49 1e-04
UniRef50_A1RTJ6 Cluster: Beta-lactamase domain protein; n=1; Pyr... 48 1e-04
UniRef50_Q5KCZ0 Cluster: Endoribonuclease YSH1; n=2; cellular or... 48 1e-04
UniRef50_UPI00015BA9DD Cluster: beta-lactamase domain protein; n... 48 2e-04
UniRef50_Q0LL72 Cluster: Beta-lactamase-like; n=3; Herpetosiphon... 48 2e-04
UniRef50_A6C193 Cluster: Exonuclease of the beta-lactamase fold ... 48 2e-04
UniRef50_Q9UKF6 Cluster: Cleavage and polyadenylation specificit... 48 2e-04
UniRef50_Q11PK2 Cluster: Metallo-beta-lactamase superfamily prot... 47 3e-04
UniRef50_Q5TA44 Cluster: Cleavage and polyadenylation specific f... 47 3e-04
UniRef50_Q8ZYD9 Cluster: MRNA 3'-end processing factor, conjectu... 47 3e-04
UniRef50_Q4PEJ3 Cluster: Endoribonuclease YSH1; n=6; Fungi/Metaz... 47 3e-04
UniRef50_Q6CAZ0 Cluster: Yarrowia lipolytica chromosome C of str... 47 4e-04
UniRef50_Q7RRQ3 Cluster: Cleavage and polyadenylation specificit... 46 6e-04
UniRef50_A6QXP5 Cluster: Putative uncharacterized protein; n=1; ... 46 6e-04
UniRef50_Q8KET4 Cluster: Metallo-beta-lactamase superfamily prot... 46 8e-04
UniRef50_Q73MR4 Cluster: Metallo-beta-lactamase family protein; ... 46 8e-04
UniRef50_Q4N0H3 Cluster: Putative uncharacterized protein; n=2; ... 46 8e-04
UniRef50_Q236M0 Cluster: RNA-metabolising metallo-beta-lactamase... 46 8e-04
UniRef50_Q8RBU2 Cluster: Predicted exonuclease of the beta-lacta... 46 0.001
UniRef50_Q23NE4 Cluster: Putative uncharacterized protein; n=1; ... 46 0.001
UniRef50_A0RXV0 Cluster: Cleavage and polyadenylation specificit... 46 0.001
UniRef50_Q1GJ92 Cluster: Beta-lactamase-like protein; n=4; Rhodo... 45 0.002
UniRef50_Q8SRZ4 Cluster: CLEAVAGE AND POLYADENYLATION SPECIFICIT... 44 0.002
UniRef50_Q6BMW3 Cluster: Endoribonuclease YSH1; n=2; Saccharomyc... 44 0.002
UniRef50_A5KD85 Cluster: Cleavage and polyadenylation specifity ... 44 0.003
UniRef50_Q3ZY44 Cluster: Metallo-beta-lactamase family protein; ... 44 0.004
UniRef50_Q2YZG4 Cluster: Predicted exonuclease of the beta-lacta... 44 0.004
UniRef50_Q7UMQ3 Cluster: Cleavage and polyadenylation specifity ... 43 0.005
UniRef50_Q15V20 Cluster: RNA-metabolising metallo-beta-lactamase... 43 0.005
UniRef50_Q8TW11 Cluster: Predicted metal-dependent RNase, consis... 43 0.005
UniRef50_A5KKJ4 Cluster: Putative uncharacterized protein; n=1; ... 43 0.007
UniRef50_A3I563 Cluster: Zn-dependent hydrolase, beta-lactamase ... 43 0.007
UniRef50_Q9UXE8 Cluster: MRNA 3'-end polyadenylation factor; n=6... 43 0.007
UniRef50_Q5CPX2 Cluster: Cleavage and polyadenylation specifity ... 42 0.009
UniRef50_Q97AZ6 Cluster: Cleavage and polyadenylation specificit... 42 0.009
UniRef50_Q9RZ85 Cluster: Cleavage and polyadenylation specificit... 42 0.012
UniRef50_Q6MLH4 Cluster: Predicted exonuclease of the beta-lacta... 42 0.012
UniRef50_A7QCN8 Cluster: Chromosome chr12 scaffold_78, whole gen... 42 0.012
UniRef50_Q7QYP3 Cluster: GLP_393_23867_26140; n=1; Giardia lambl... 42 0.012
UniRef50_A7AWH8 Cluster: RNA-metabolising metallo-beta-lactamase... 42 0.012
UniRef50_Q60355 Cluster: Uncharacterized protein MJ0047; n=6; Me... 42 0.012
UniRef50_UPI00004992E1 Cluster: cleavage and polyadenylation spe... 42 0.016
UniRef50_Q3AAG6 Cluster: Metallo-beta-lactamase family protein; ... 42 0.016
UniRef50_A3WMD7 Cluster: Predicted exonuclease of the beta-lacta... 42 0.016
UniRef50_Q0HMU8 Cluster: RNA-metabolizing metallo-beta-lactamase... 41 0.022
UniRef50_Q0EST3 Cluster: Beta-lactamase-like; n=2; Thermoanaerob... 41 0.022
UniRef50_Q023M0 Cluster: Beta-lactamase domain protein; n=1; Sol... 41 0.022
UniRef50_A7HPZ1 Cluster: Beta-lactamase domain protein; n=2; Alp... 41 0.022
UniRef50_A6FNJ5 Cluster: Beta-lactamase-like protein; n=1; Roseo... 41 0.022
UniRef50_A0JWK6 Cluster: Beta-lactamase domain protein; n=2; Bac... 41 0.022
UniRef50_Q2RJ88 Cluster: RNA-metabolising metallo-beta-lactamase... 41 0.029
UniRef50_A5URN4 Cluster: Beta-lactamase domain protein; n=5; Chl... 41 0.029
UniRef50_Q4AMZ9 Cluster: Beta-lactamase-like:RNA-metabolising me... 40 0.038
UniRef50_A5N0B8 Cluster: Putative uncharacterized protein; n=1; ... 40 0.038
UniRef50_Q11BH9 Cluster: Beta-lactamase-like; n=6; Proteobacteri... 40 0.050
UniRef50_Q011B3 Cluster: Putative metallo beta subunit lactamase... 40 0.050
UniRef50_Q5WCW7 Cluster: Beta-lactamase superfamily Zn-dependent... 40 0.066
UniRef50_Q3LWF4 Cluster: Ysh1 3' mRNA end processing factor; n=1... 40 0.066
UniRef50_Q92EY9 Cluster: Lin0319 protein; n=39; Bacilli|Rep: Lin... 39 0.088
UniRef50_Q2NK28 Cluster: Zn-dependent hydrolase; n=2; Candidatus... 39 0.088
UniRef50_O87142 Cluster: WbfZ protein; n=32; Vibrionaceae|Rep: W... 39 0.088
UniRef50_A7CRQ7 Cluster: Beta-lactamase domain protein; n=1; Opi... 39 0.088
UniRef50_A0UZ06 Cluster: Beta-lactamase-like; n=1; Clostridium c... 39 0.088
UniRef50_Q8IB25 Cluster: Putative uncharacterized protein MAL8P1... 39 0.088
UniRef50_A6E886 Cluster: Metallo-beta-lactamase superfamily prot... 39 0.12
UniRef50_Q5ZWR4 Cluster: Metallo-beta lactamase family; n=4; Leg... 38 0.15
UniRef50_Q50EJ8 Cluster: Metallo-beta-lactamase superfamily hydr... 38 0.15
UniRef50_A3D3L5 Cluster: Putative uncharacterized protein; n=1; ... 38 0.15
UniRef50_Q6MTU5 Cluster: CONSERVED HYPOTEHTICAL PROTEIN; n=3; Mo... 38 0.20
UniRef50_Q6ME06 Cluster: Putative uncharacterized protein; n=1; ... 38 0.27
UniRef50_A6TSN2 Cluster: Beta-lactamase domain protein; n=1; Alk... 38 0.27
UniRef50_O31760 Cluster: UPF0036 protein ymfA; n=77; Firmicutes|... 38 0.27
UniRef50_A0YHA6 Cluster: DNA internalization-related competence ... 37 0.35
UniRef50_Q8DE34 Cluster: Predicted exonuclease of the beta-lacta... 37 0.47
UniRef50_Q72GW5 Cluster: Cleavage and polyadenylation specificit... 37 0.47
UniRef50_A4VJP5 Cluster: Metallo-beta-lactamase superfamily prot... 37 0.47
UniRef50_Q226C1 Cluster: Putative FEG protein; n=2; Tetrahymena ... 37 0.47
UniRef50_A7DPN0 Cluster: Beta-lactamase domain protein; n=1; Can... 37 0.47
UniRef50_UPI000049831F Cluster: cleavage and polyadenylation spe... 36 0.62
UniRef50_Q9SRR3 Cluster: F21O3.24 protein; n=3; core eudicotyled... 36 0.62
UniRef50_Q9FMW0 Cluster: Genomic DNA, chromosome 5, P1 clone:MLE... 36 0.62
UniRef50_Q9HKD3 Cluster: Putative uncharacterized protein Ta0668... 36 0.62
UniRef50_Q6D8S0 Cluster: Anaerobic nitric oxide reductase flavor... 36 0.62
UniRef50_Q4SGI2 Cluster: Chromosome undetermined SCAF14594, whol... 36 0.82
UniRef50_Q89VA5 Cluster: Bll1142 protein; n=7; Bradyrhizobiaceae... 36 0.82
UniRef50_Q2G7Y1 Cluster: Beta-lactamase-like protein; n=1; Novos... 36 0.82
UniRef50_Q1NVJ9 Cluster: Beta-lactamase-like:RNA-metabolising me... 36 0.82
UniRef50_A6Q9T8 Cluster: RNA-metabolising metallo-beta-lactamase... 36 0.82
UniRef50_A4EC58 Cluster: Putative uncharacterized protein; n=1; ... 36 0.82
UniRef50_A1ZG78 Cluster: Exonuclease of the beta-lactamase fold ... 36 0.82
UniRef50_A7PHF3 Cluster: Chromosome chr17 scaffold_16, whole gen... 36 0.82
UniRef50_Q4TC63 Cluster: Chromosome undetermined SCAF7053, whole... 36 1.1
UniRef50_Q9AA00 Cluster: Metallo-beta-lactamase family protein; ... 36 1.1
UniRef50_Q5QU60 Cluster: Predicted exonuclease of the beta-lacta... 36 1.1
UniRef50_Q3ADT3 Cluster: Anaerobic nitric oxide reductase flavor... 36 1.1
UniRef50_Q1B028 Cluster: Beta-lactamase-like protein; n=1; Rubro... 36 1.1
UniRef50_Q194D1 Cluster: Beta-lactamase-like; n=3; Clostridia|Re... 36 1.1
UniRef50_Q12E81 Cluster: Beta-lactamase-like; n=14; Proteobacter... 35 1.4
UniRef50_A6Q3H4 Cluster: RNA-metabolising metallo-beta-lactamase... 35 1.4
UniRef50_A1S0I1 Cluster: Beta-lactamase domain protein; n=1; The... 35 1.4
UniRef50_A4STH4 Cluster: Anaerobic nitric oxide reductase flavor... 35 1.4
UniRef50_Q31DU4 Cluster: Phosphonate metabolism accessory protei... 35 1.9
UniRef50_Q1PVS7 Cluster: Putative uncharacterized protein; n=1; ... 35 1.9
UniRef50_Q4UBM2 Cluster: Cleavage and polyadenylation specificty... 35 1.9
UniRef50_Q8RAH0 Cluster: Predicted hydrolase of the metallo-beta... 34 2.5
UniRef50_Q41CQ7 Cluster: Beta-lactamase-like; n=1; Exiguobacteri... 34 2.5
UniRef50_Q97DE0 Cluster: Metallo-beta-lactamase superfamily hydr... 34 3.3
UniRef50_Q5NLC0 Cluster: Metallo-beta-lactamase hydrolase subuni... 34 3.3
UniRef50_Q83XN5 Cluster: Putative beta-lactamase; n=1; Streptomy... 34 3.3
UniRef50_Q3Y227 Cluster: Beta-lactamase-like; n=1; Enterococcus ... 34 3.3
UniRef50_Q024Z8 Cluster: Beta-lactamase domain protein precursor... 34 3.3
UniRef50_A6PE29 Cluster: Beta-lactamase domain protein; n=1; She... 34 3.3
UniRef50_Q7QUX2 Cluster: GLP_577_37199_34023; n=1; Giardia lambl... 34 3.3
UniRef50_Q6BHT7 Cluster: Similar to CA2422|IPF14997 Candida albi... 34 3.3
UniRef50_A2SUA2 Cluster: Beta-lactamase domain protein; n=1; Met... 34 3.3
UniRef50_P54122 Cluster: UPF0036 protein Cgl1970/cg2160; n=31; A... 34 3.3
UniRef50_Q9NV88 Cluster: Integrator complex subunit 9; n=41; Eum... 34 3.3
UniRef50_Q9K9I5 Cluster: BH2662 protein; n=43; Bacteria|Rep: BH2... 33 4.4
UniRef50_Q97D03 Cluster: Metallo-beta-lactamase superfamily hydr... 33 4.4
UniRef50_Q81QL9 Cluster: Hydrolase, putative; n=10; Firmicutes|R... 33 4.4
UniRef50_Q748A2 Cluster: Metallo-beta-lactamase family protein; ... 33 4.4
UniRef50_Q1DC87 Cluster: Metallo-beta-lactamase family protein; ... 33 4.4
UniRef50_A6G7H1 Cluster: Serine/threonine kinase family protein;... 33 4.4
UniRef50_A5UWV7 Cluster: Beta-lactamase domain protein; n=2; Ros... 33 4.4
UniRef50_A3TIY7 Cluster: Putative uncharacterized protein; n=1; ... 33 4.4
UniRef50_A5BGD5 Cluster: Putative uncharacterized protein; n=1; ... 33 4.4
UniRef50_Q4YUZ6 Cluster: Putative uncharacterized protein; n=4; ... 33 4.4
UniRef50_Q59M67 Cluster: Potential response regulator protein; n... 33 4.4
UniRef50_UPI0000E0E9AB Cluster: DNA internalization-related comp... 33 5.8
UniRef50_Q6N2A1 Cluster: Beta-lactamase-like; n=12; Rhizobiales|... 33 5.8
UniRef50_A7H6H0 Cluster: Beta-lactamase domain protein; n=2; Ana... 33 5.8
UniRef50_A6LMC9 Cluster: Beta-lactamase domain protein; n=1; The... 33 5.8
UniRef50_A5K7P0 Cluster: RNA-metabolising metallo-beta-lactamase... 33 5.8
UniRef50_A5K5Q9 Cluster: Putative uncharacterized protein; n=1; ... 33 5.8
UniRef50_A0D1M0 Cluster: Chromosome undetermined scaffold_34, wh... 33 5.8
UniRef50_Q5V0H4 Cluster: MRNA 3'-end processing factor; n=4; Hal... 33 5.8
UniRef50_A0RY50 Cluster: Exonuclease of the beta-lactamase fold;... 33 5.8
UniRef50_Q57626 Cluster: Uncharacterized protein MJ0162; n=6; Me... 33 5.8
UniRef50_Q8EQ13 Cluster: Hypothetical conserved protein; n=1; Oc... 33 7.6
UniRef50_Q8DAV3 Cluster: Rec2-related protein; n=2; Vibrio vulni... 33 7.6
UniRef50_Q182G4 Cluster: Metallo beta-lactamase superfamily lipo... 33 7.6
UniRef50_Q54SH0 Cluster: Putative uncharacterized protein; n=1; ... 33 7.6
UniRef50_A2QCH2 Cluster: Putative uncharacterized protein; n=1; ... 33 7.6
UniRef50_O29680 Cluster: Putative uncharacterized protein; n=1; ... 33 7.6
>UniRef50_Q9V3D6 Cluster: Probable cleavage and polyadenylation
specificity factor subunit 2; n=7; Coelomata|Rep:
Probable cleavage and polyadenylation specificity factor
subunit 2 - Drosophila melanogaster (Fruit fly)
Length = 756
Score = 253 bits (620), Expect = 2e-66
Identities = 110/156 (70%), Positives = 134/156 (85%)
Frame = +3
Query: 168 MTSIIKLHCLSGAGEETPPCYVLQIDEFKFLLDCGWDEKFDMVFIKELKRHVNSIDAVLI 347
MTSIIKLH +SGA +E+PPCY+LQID+ + LLDCGWDEKFD FIKELKR V+++DAVL+
Sbjct: 1 MTSIIKLHTISGAMDESPPCYILQIDDVRILLDCGWDEKFDANFIKELKRQVHTLDAVLL 60
Query: 348 SHSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFDLFTLDDVD 527
SH D HLGALPY VGKLGL+CPIYAT+PV+KMGQMFMYDLY +H N+ +FDLF+LDDVD
Sbjct: 61 SHPDAYHLGALPYLVGKLGLNCPIYATIPVFKMGQMFMYDLYMSHFNMGDFDLFSLDDVD 120
Query: 528 MAFDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
AF++I QLKYNQ++ +K KG G+ ITPL AGH +G
Sbjct: 121 TAFEKITQLKYNQTVSLKDKGYGISITPLNAGHMIG 156
>UniRef50_Q9P2I0 Cluster: Cleavage and polyadenylation specificity
factor subunit 2; n=26; Coelomata|Rep: Cleavage and
polyadenylation specificity factor subunit 2 - Homo
sapiens (Human)
Length = 782
Score = 246 bits (602), Expect = 3e-64
Identities = 111/156 (71%), Positives = 129/156 (82%)
Frame = +3
Query: 168 MTSIIKLHCLSGAGEETPPCYVLQIDEFKFLLDCGWDEKFDMVFIKELKRHVNSIDAVLI 347
MTSIIKL LSG EE+ CY+LQ+DEF+FLLDCGWDE F M I L++HV+ IDAVL+
Sbjct: 1 MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDEHFSMDIIDSLRKHVHQIDAVLL 60
Query: 348 SHSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFDLFTLDDVD 527
SH DPLHLGALPYAVGKLGL+C IYAT+PVYKMGQMFMYDLYQ+ N +F LFTLDDVD
Sbjct: 61 SHPDPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVD 120
Query: 528 MAFDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
AFD+I QLK++Q + +KGKG GL ITPLPAGH +G
Sbjct: 121 AAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIG 156
>UniRef50_Q3UGU6 Cluster: Melanocyte cDNA, RIKEN full-length
enriched library, clone:G270022C12 product:cleavage and
polyadenylation specific factor 2, full insert sequence;
n=5; Eutheria|Rep: Melanocyte cDNA, RIKEN full-length
enriched library, clone:G270022C12 product:cleavage and
polyadenylation specific factor 2, full insert sequence
- Mus musculus (Mouse)
Length = 412
Score = 243 bits (594), Expect = 3e-63
Identities = 109/156 (69%), Positives = 129/156 (82%)
Frame = +3
Query: 168 MTSIIKLHCLSGAGEETPPCYVLQIDEFKFLLDCGWDEKFDMVFIKELKRHVNSIDAVLI 347
MTSIIKL LSG EE+ CY+LQ+DEF+FLLDCGWDE F + I L++HV+ IDAVL+
Sbjct: 1 MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDEHFSVDIIDSLRKHVHQIDAVLL 60
Query: 348 SHSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFDLFTLDDVD 527
SH DPLHLGALP+AVGKLGL+C IYAT+PVYKMGQMFMYDLYQ+ N +F LFTLDDVD
Sbjct: 61 SHPDPLHLGALPFAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVD 120
Query: 528 MAFDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
AFD+I QLK++Q + +KGKG GL ITPLPAGH +G
Sbjct: 121 AAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIG 156
>UniRef50_A7RPX1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 737
Score = 233 bits (570), Expect = 3e-60
Identities = 100/156 (64%), Positives = 124/156 (79%)
Frame = +3
Query: 168 MTSIIKLHCLSGAGEETPPCYVLQIDEFKFLLDCGWDEKFDMVFIKELKRHVNSIDAVLI 347
MTSIIKL+ LSGA +E P CY+LQ+DEF+FLLDCGW+E DM ++ +KRHV +DAVL+
Sbjct: 1 MTSIIKLNVLSGAHDEAPLCYLLQVDEFRFLLDCGWNETLDMEIMESIKRHVQQVDAVLV 60
Query: 348 SHSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFDLFTLDDVD 527
S D H+G LPY VGK GL CPIY T+PVYKMGQMFMYD YQ H+N EFD+F+LDDVD
Sbjct: 61 SFPDIYHMGGLPYLVGKCGLHCPIYTTIPVYKMGQMFMYDWYQCHQNSEEFDVFSLDDVD 120
Query: 528 MAFDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
FD+I+QLKY+Q++ +KGKG G+ ITP AGH +G
Sbjct: 121 AVFDKIIQLKYSQTVSLKGKGHGITITPYAAGHMIG 156
>UniRef50_Q4S732 Cluster: Chromosome 14 SCAF14723, whole genome
shotgun sequence; n=5; Euteleostomi|Rep: Chromosome 14
SCAF14723, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 765
Score = 221 bits (541), Expect = 9e-57
Identities = 109/180 (60%), Positives = 129/180 (71%), Gaps = 24/180 (13%)
Frame = +3
Query: 168 MTSIIKLHCLSGAGEETPPCYVLQIDEFKFLLDCGWDEKFDMVFIKELKRHVNSIDAVLI 347
MTSIIKL +SG EE+ CY+LQ+DEF+FLLDCGWDE F M I +KR+V+ +DAVL+
Sbjct: 1 MTSIIKLTAVSGVQEESALCYLLQVDEFRFLLDCGWDENFSMDIIDAMKRYVHQVDAVLL 60
Query: 348 SHSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFDLFTLDDVD 527
SH DP+HLGALPYAVGKLGL+C IYAT+PVYKMGQMFMYDLYQ+ N +F LFTLDDVD
Sbjct: 61 SHPDPIHLGALPYAVGKLGLNCTIYATIPVYKMGQMFMYDLYQSRNNSEDFTLFTLDDVD 120
Query: 528 MAFDRIVQLKYNQSIEMK------------------------GKGLGLRITPLPAGHSLG 635
AFD+I QLKY+Q + +K GKG GL ITPLPAGH +G
Sbjct: 121 SAFDKIQQLKYSQIVSLKGKLASKRLFTWSKLPKYVMAFYATGKGHGLSITPLPAGHMIG 180
>UniRef50_O17403 Cluster: Probable cleavage and polyadenylation
specificity factor subunit 2; n=2; Caenorhabditis|Rep:
Probable cleavage and polyadenylation specificity factor
subunit 2 - Caenorhabditis elegans
Length = 843
Score = 203 bits (496), Expect = 2e-51
Identities = 92/156 (58%), Positives = 117/156 (75%)
Frame = +3
Query: 168 MTSIIKLHCLSGAGEETPPCYVLQIDEFKFLLDCGWDEKFDMVFIKELKRHVNSIDAVLI 347
MTSIIKL SGA +E P CY+LQ+D LLDCGWDE+F + + +ELK + I AVLI
Sbjct: 1 MTSIIKLKVFSGAKDEGPLCYLLQVDGDYILLDCGWDERFGLQYFEELKPFIPKISAVLI 60
Query: 348 SHSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFDLFTLDDVD 527
SH DPLHLG LPY V K GL+ P+YAT+PVYKMGQMF+YD+ +H +V EF+ +TLDDVD
Sbjct: 61 SHPDPLHLGGLPYLVSKCGLTAPVYATVPVYKMGQMFIYDMVYSHLDVEEFEHYTLDDVD 120
Query: 528 MAFDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
AF+++ Q+KYNQ++ +KG G+ T LPAGH LG
Sbjct: 121 TAFEKVEQVKYNQTVVLKGDS-GVHFTALPAGHMLG 155
>UniRef50_Q8WPK6 Cluster: Similar to cleavage and polyadenylation
factor; n=1; Oikopleura dioica|Rep: Similar to cleavage
and polyadenylation factor - Oikopleura dioica
(Tunicate)
Length = 765
Score = 191 bits (465), Expect = 1e-47
Identities = 87/156 (55%), Positives = 111/156 (71%)
Frame = +3
Query: 168 MTSIIKLHCLSGAGEETPPCYVLQIDEFKFLLDCGWDEKFDMVFIKELKRHVNSIDAVLI 347
MTSI+K LSG +E P C++LQID+FKFLLDCGW E+ I LKRH IDA+LI
Sbjct: 1 MTSIVKFQSLSGFDDEAPHCHLLQIDDFKFLLDCGWAEQHHEKIIDGLKRHGRQIDAILI 60
Query: 348 SHSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFDLFTLDDVD 527
SH D LH G LPY + KLG++CPIY T+P KMGQMF+YD + V +FD+FTLDDVD
Sbjct: 61 SHPDLLHCGMLPY-LSKLGITCPIYMTMPACKMGQMFLYDFVLSRTAVEDFDMFTLDDVD 119
Query: 528 MAFDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
FDR QLK+NQ+ ++G+ G++I P+ AGH +G
Sbjct: 120 AVFDRATQLKHNQTEAVRGQDYGIQIMPVQAGHMIG 155
>UniRef50_Q9LKF9 Cluster: Cleavage and polyadenylation specificity
factor subunit 2; n=8; Magnoliophyta|Rep: Cleavage and
polyadenylation specificity factor subunit 2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 739
Score = 173 bits (422), Expect = 2e-42
Identities = 77/156 (49%), Positives = 110/156 (70%)
Frame = +3
Query: 168 MTSIIKLHCLSGAGEETPPCYVLQIDEFKFLLDCGWDEKFDMVFIKELKRHVNSIDAVLI 347
M + +++ L G E P Y++ ID F FL+DCGW++ FD ++ L R ++IDAVL+
Sbjct: 1 MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLIDCGWNDLFDTSLLEPLSRVASTIDAVLL 60
Query: 348 SHSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFDLFTLDDVD 527
SH D LH+GALPYA+ +LGLS P+YAT PV+++G + MYD + + K VS+FDLFTLDD+D
Sbjct: 61 SHPDTLHIGALPYAMKQLGLSAPVYATEPVHRLGLLTMYDQFLSRKQVSDFDLFTLDDID 120
Query: 528 MAFDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
AF +++L Y+Q+ + GKG G+ I P AGH LG
Sbjct: 121 SAFQNVIRLTYSQNYHLSGKGEGIVIAPHVAGHMLG 156
>UniRef50_Q55BS1 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 784
Score = 170 bits (414), Expect = 2e-41
Identities = 79/158 (50%), Positives = 105/158 (66%), Gaps = 2/158 (1%)
Frame = +3
Query: 168 MTSIIKLHCLSGAGEETPPCYVLQIDEFKFLLDCGWDEKFDMVFIKELKRHVNSIDAVLI 347
M SIIK LSGA +E+PPCY+L+ID+F LLDCG D ++ L++ IDAVL+
Sbjct: 1 MASIIKFTALSGAKDESPPCYLLEIDDFCILLDCGLSYNLDFSLLEPLEKVAKKIDAVLL 60
Query: 348 SHSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFDLFTLDDVD 527
SHSD H+G LPY VGK GL+ IY T PV KMG MF+YDLY+ + EF ++LD++D
Sbjct: 61 SHSDTTHIGGLPYVVGKYGLTGTIYGTTPVLKMGTMFLYDLYENKMSQEEFQQYSLDNID 120
Query: 528 MAF--DRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
F DR +L ++Q + GKG G+ ITP AGH++G
Sbjct: 121 SCFGEDRFKELSFSQHYSLSGKGKGISITPYLAGHTIG 158
>UniRef50_Q01GI5 Cluster: Polyadenylation cleavage/specificity
factor 100 kDa subunit; n=1; Ostreococcus tauri|Rep:
Polyadenylation cleavage/specificity factor 100 kDa
subunit - Ostreococcus tauri
Length = 807
Score = 159 bits (387), Expect = 4e-38
Identities = 75/146 (51%), Positives = 98/146 (67%), Gaps = 1/146 (0%)
Frame = +3
Query: 201 GAGEETPPCYVLQIDEFKFLLDCGWDEKFDMVFIKELKRHVNSIDAVLISHSDPLHLGAL 380
GAGE CY + ID LLDCGW + FD+ +K L+ +DAVLISH D HLGAL
Sbjct: 40 GAGERAM-CYHVSIDGCNILLDCGWTDAFDVEMLKPLEAIAKDVDAVLISHPDTAHLGAL 98
Query: 381 PYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEF-DLFTLDDVDMAFDRIVQLK 557
PYA GKLG++C +YATLPV+KMGQM+MYD + ++ +F + F+LDDVD AF V +K
Sbjct: 99 PYAFGKLGMNCKVYATLPVHKMGQMYMYDHFLTRQDQEDFQETFSLDDVDKAFAAFVPVK 158
Query: 558 YNQSIEMKGKGLGLRITPLPAGHSLG 635
Y Q ++GKG G+ + AGH+LG
Sbjct: 159 YQQLSMLRGKGEGISVMAYAAGHTLG 184
>UniRef50_A4RR19 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 715
Score = 157 bits (381), Expect = 2e-37
Identities = 72/138 (52%), Positives = 96/138 (69%), Gaps = 1/138 (0%)
Frame = +3
Query: 225 CYVLQIDEFKFLLDCGWDEKFDMVFIKELKRHVNSIDAVLISHSDPLHLGALPYAVGKLG 404
CY + ID LLDCGW++KFD+ +K L +DAVLISH D HLGALPYA GKLG
Sbjct: 2 CYHVSIDGCNILLDCGWNDKFDVDMLKPLAAIAPKVDAVLISHPDTAHLGALPYAFGKLG 61
Query: 405 LSCPIYATLPVYKMGQMFMYDLYQAHKNVSEF-DLFTLDDVDMAFDRIVQLKYNQSIEMK 581
++C +YATLPV+KMGQM+MYD + ++ +F ++F+LDDVD AF V +KY Q ++
Sbjct: 62 MNCKVYATLPVHKMGQMYMYDHFLTRQDQGDFQEVFSLDDVDTAFAAFVPVKYMQLSMLR 121
Query: 582 GKGLGLRITPLPAGHSLG 635
GKG G+ + AGH+LG
Sbjct: 122 GKGDGISVMAYAAGHTLG 139
>UniRef50_A2EDT7 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 700
Score = 130 bits (314), Expect = 3e-29
Identities = 66/155 (42%), Positives = 95/155 (61%)
Frame = +3
Query: 171 TSIIKLHCLSGAGEETPPCYVLQIDEFKFLLDCGWDEKFDMVFIKELKRHVNSIDAVLIS 350
T+ I LSGA TP Y+L +DEF FLLDCGW E F + I+ + ++AVL+S
Sbjct: 5 TTSISFQPLSGAQSTTPFAYLLHVDEFTFLLDCGWTEDFRLEDIQTQIEICSHVNAVLLS 64
Query: 351 HSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFDLFTLDDVDM 530
H+ H+GALPY GLS PI+AT+P+ +G + +YD Y ++ EF F +D+D
Sbjct: 65 HASIEHIGALPYLCSH-GLSAPIFATMPIPALGSLLIYDSYLNIRDEEEFKEFNANDIDQ 123
Query: 531 AFDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
AF +I ++ Y QS ++ GK + ITP AG++LG
Sbjct: 124 AFQKINRMTYQQSEQLDGK--NITITPYNAGNTLG 156
>UniRef50_UPI000049A022 Cluster: cleavage and polyadenylation
specificity factor; n=1; Entamoeba histolytica
HM-1:IMSS|Rep: cleavage and polyadenylation specificity
factor - Entamoeba histolytica HM-1:IMSS
Length = 693
Score = 85.4 bits (202), Expect = 1e-15
Identities = 53/152 (34%), Positives = 83/152 (54%)
Frame = +3
Query: 180 IKLHCLSGAGEETPPCYVLQIDEFKFLLDCGWDEKFDMVFIKELKRHVNSIDAVLISHSD 359
I+ L G+ +P +L+I+ K LLDCG D F I++ ++ ID VLISHSD
Sbjct: 3 IRTRSLFDGGKTSPISALLEINSTKILLDCGVDCNFTREIIEKYDS-ISDIDIVLISHSD 61
Query: 360 PLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFDLFTLDDVDMAFD 539
H+GALPY K +C IY T PV KMG + M + + + + + + L DV+ +
Sbjct: 62 LRHMGALPYIANK-NPNCSIYTTDPVGKMGYLCMKEAIKTQQLIG-YPCYRLKDVEQTYK 119
Query: 540 RIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
RI L+Y ++ G+ + ++ P+G +LG
Sbjct: 120 RIFLLEY-YKLQKCGE---VEVSAHPSGRTLG 147
>UniRef50_Q4PAM2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 979
Score = 77.0 bits (181), Expect = 4e-13
Identities = 44/120 (36%), Positives = 66/120 (55%), Gaps = 11/120 (9%)
Frame = +3
Query: 309 LKRHVNSIDAVLISHSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKN 488
L++ ++ID VL+SHS HLG YA LGL C +YAT+PV MG++ + + Q ++
Sbjct: 120 LRQLASTIDLVLLSHSSLDHLGLYAYAHANLGLRCQVYATMPVQSMGKLTVLEAIQTWRS 179
Query: 489 VSEFD-----------LFTLDDVDMAFDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
+ + L T D V+ AF+ I ++Y Q ++GK L +T AGHSLG
Sbjct: 180 EVDIEKECTSASTRRCLATPDQVEDAFEEIKTVRYMQPTHLEGKCASLTLTAYNAGHSLG 239
>UniRef50_O74740 Cluster: Cleavage factor two Cft2/polyadenylation
factor CPSF-73; n=1; Schizosaccharomyces pombe|Rep:
Cleavage factor two Cft2/polyadenylation factor CPSF-73
- Schizosaccharomyces pombe (Fission yeast)
Length = 797
Score = 73.7 bits (173), Expect = 3e-12
Identities = 44/102 (43%), Positives = 59/102 (57%), Gaps = 1/102 (0%)
Frame = +3
Query: 333 DAVLISHSDPLHLGALPYAVGKLGL-SCPIYATLPVYKMGQMFMYDLYQAHKNVSEFDLF 509
D +L+SHSD H+G L YA K + IYATLP MG+M M D +++ +S+
Sbjct: 45 DLILLSHSDLAHIGGLVYAYYKYDWKNAYIYATLPTINMGRMTMLDAIKSNY-ISDM--- 100
Query: 510 TLDDVDMAFDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
+ DVD FD I+ L+Y Q + GK GL IT AGH+LG
Sbjct: 101 SKADVDAVFDSIIPLRYQQPTLLLGKCSGLTITAYNAGHTLG 142
>UniRef50_Q2UQF0 Cluster: MRNA cleavage and polyadenylation factor
II complex; n=7; Eurotiomycetidae|Rep: MRNA cleavage and
polyadenylation factor II complex - Aspergillus oryzae
Length = 1014
Score = 71.3 bits (167), Expect = 2e-11
Identities = 32/93 (34%), Positives = 56/93 (60%), Gaps = 3/93 (3%)
Frame = +3
Query: 231 VLQIDE-FKFLLDCGWDEKFDMVFIKELKRHVNSIDAVLISHSDPLHLGALPYAVGKLGL 407
+L++D K L+D GWD+ FD + ++EL++HV ++ +L++H+ P H+GA + L
Sbjct: 21 ILELDGGIKILVDVGWDDTFDPLDLQELEKHVPTLSLILLTHATPAHIGAFAHCCKTFPL 80
Query: 408 --SCPIYATLPVYKMGQMFMYDLYQAHKNVSEF 500
P+YAT PV +G+ + DLY + + F
Sbjct: 81 FTQIPVYATSPVIALGRTLLQDLYASSPLAATF 113
>UniRef50_A2R7F5 Cluster: Contig An16c0120, complete genome.
precursor; n=1; Aspergillus niger|Rep: Contig An16c0120,
complete genome. precursor - Aspergillus niger
Length = 865
Score = 71.3 bits (167), Expect = 2e-11
Identities = 32/93 (34%), Positives = 56/93 (60%), Gaps = 3/93 (3%)
Frame = +3
Query: 231 VLQIDE-FKFLLDCGWDEKFDMVFIKELKRHVNSIDAVLISHSDPLHLGALPYAVGKLGL 407
+L++D K L+D GWD+ FD + ++EL++HV ++ +L++H+ P H+GA + L
Sbjct: 21 ILELDGGIKILVDVGWDDTFDPLDLQELEKHVPTLSLILLTHATPAHIGAFAHCCKTFPL 80
Query: 408 --SCPIYATLPVYKMGQMFMYDLYQAHKNVSEF 500
P+YAT PV +G+ + DLY + + F
Sbjct: 81 FTQIPVYATSPVIALGRTLLQDLYASSPLAATF 113
>UniRef50_Q5KIP3 Cluster: Cleavage and polyadenylation specificity
factor subunit, putative; n=1; Filobasidiella
neoformans|Rep: Cleavage and polyadenylation specificity
factor subunit, putative - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 899
Score = 70.9 bits (166), Expect = 2e-11
Identities = 50/181 (27%), Positives = 90/181 (49%), Gaps = 28/181 (15%)
Frame = +3
Query: 177 IIKLHCLSGAGEETPP----CYVLQIDEFKFLLDCGW------DEKFDMVFIKELKRHVN 326
+I L LS + ET P CY+L++D+ + LLD G ++ + + ++
Sbjct: 1 MITLTPLSASAAETSPSEPICYLLELDDARILLDMGQRDYRASSQQCSWDYEEAVRDLAP 60
Query: 327 SIDAVLISHSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFD- 503
++ VL+SHS +L PYA + GL+CP+YAT P +MG++ ++ ++ D
Sbjct: 61 TLSLVLLSHSSSNYLSLYPYARARWGLTCPVYATQPTVEMGRVVCLAEAESWRSECPVDS 120
Query: 504 -----------------LFTLDDVDMAFDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSL 632
+ T++++ AFD I ++Y+Q + + G L +TP +GH+L
Sbjct: 121 EKVAADDGSKKPLRGPFVPTVEEIHEAFDWIKAVRYSQPLHLGGDFSHLLLTPFASGHTL 180
Query: 633 G 635
G
Sbjct: 181 G 181
>UniRef50_A7F0N0 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Sclerotinia sclerotiorum 1980
Length = 936
Score = 70.5 bits (165), Expect = 3e-11
Identities = 50/160 (31%), Positives = 82/160 (51%), Gaps = 13/160 (8%)
Frame = +3
Query: 195 LSGAGEETPPCY-VLQIDE-FKFLLDCGWDEKFDMVFIKELKRHVNSIDAVLISHSDPLH 368
L GA E+ +L++D K L+D GWDE FD+ ++EL++ + ++ +L++H+ H
Sbjct: 7 LQGAQSESSASQSLLELDGGVKVLIDVGWDETFDVEKLRELEKQIPTLSLILLTHATVPH 66
Query: 369 LGALPYAVGKLGL--SCPIYATLPVYKMGQMFMYDLYQAH-------KNVSEFDLF--TL 515
+ A + L P+YAT PV +G+ + DLY + S F L T
Sbjct: 67 IAAYAHCCKHFPLFTRIPVYATHPVIALGRTLLQDLYSSTPLASTVIPTTSSFLLQPPTK 126
Query: 516 DDVDMAFDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
++++ F + LKY+Q + G+ IT AGHSLG
Sbjct: 127 EEINYYFSLVRPLKYSQPHQPLN---GVTITAYNAGHSLG 163
>UniRef50_A6R733 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative
uncharacterized protein - Ajellomyces capsulatus NAm1
Length = 977
Score = 70.1 bits (164), Expect = 4e-11
Identities = 33/86 (38%), Positives = 52/86 (60%), Gaps = 3/86 (3%)
Frame = +3
Query: 231 VLQIDE-FKFLLDCGWDEKFDMVFIKELKRHVNSIDAVLISHSDPLHLGALPYAVGKLGL 407
+L++D K L+D GWDE FD+ + EL+R + ++ VL++H+ P H+GA + L
Sbjct: 21 ILELDGGVKILVDVGWDESFDVSALAELERQIPTLSLVLLTHATPSHIGAFAHCCKTFPL 80
Query: 408 --SCPIYATLPVYKMGQMFMYDLYQA 479
PIYAT PV +G+ + DLY +
Sbjct: 81 FNQIPIYATSPVIALGRTLLQDLYSS 106
>UniRef50_A5DXK9 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 1067
Score = 70.1 bits (164), Expect = 4e-11
Identities = 45/137 (32%), Positives = 77/137 (56%), Gaps = 6/137 (4%)
Frame = +3
Query: 243 DEFKFLLDCGWDEKFDMVFIKELKRHVNSIDAVLISHSDPLHLGA---LPYAVGKLGLSC 413
+E + L D W D + +K +++++ SIDA++ISHS + L K+ L+
Sbjct: 25 NEHRILADPSWSGS-DALVVKFMEQYLPSIDAIIISHSTTEFISGYILLCIYFPKIMLTI 83
Query: 414 PIYATLPVYKMGQMFMYDLYQAHKNVSEF--DLFTLDDVDMAFDRIVQLKYNQSIEM-KG 584
P+Y+TLPV ++G++ + Y++ + L LD++D FD+ +KY Q+I + G
Sbjct: 84 PVYSTLPVNQLGRISTVEYYRSQGVLGPVLSSLIELDEIDNWFDKFKTVKYLQNITLCDG 143
Query: 585 KGLGLRITPLPAGHSLG 635
K L +TP +GHSLG
Sbjct: 144 K---LTMTPYNSGHSLG 157
>UniRef50_A3GHD1 Cluster: Predicted protein; n=3;
Saccharomycetales|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 934
Score = 66.5 bits (155), Expect = 5e-10
Identities = 43/136 (31%), Positives = 75/136 (55%), Gaps = 5/136 (3%)
Frame = +3
Query: 243 DEFKFLLDCGWDEKFDMVFIKELKRHVNSIDAVLISHSDPLHLGALPYAVGK---LGLSC 413
+EF+ L D W+ K D+ + +++H+ + + +L+SHS P + K L +
Sbjct: 25 NEFRVLADPSWNGK-DVNSVMFMEQHLRNTNIILLSHSTPEFISGYVLMCLKFPNLMANI 83
Query: 414 PIYATLPVYKMGQMFMYDLYQAHKNVSEFD--LFTLDDVDMAFDRIVQLKYNQSIEMKGK 587
+Y+TLPV ++G++ + Y+A+ + + L LD+VD FD+I LKY Q + +
Sbjct: 84 QVYSTLPVNQLGRLSTVEFYRANGMLGPLNTALLELDEVDEWFDKISLLKYLQILNVFDN 143
Query: 588 GLGLRITPLPAGHSLG 635
+ ITP AGH+LG
Sbjct: 144 --KVVITPYNAGHTLG 157
>UniRef50_Q86A79 Cluster: Similar to Homo sapiens (Human). Cleavage
and polyadenylation specificity factor, 73 kDa subunit;
n=2; Dictyostelium discoideum|Rep: Similar to Homo
sapiens (Human). Cleavage and polyadenylation
specificity factor, 73 kDa subunit - Dictyostelium
discoideum (Slime mold)
Length = 774
Score = 65.7 bits (153), Expect = 9e-10
Identities = 44/152 (28%), Positives = 73/152 (48%), Gaps = 7/152 (4%)
Frame = +3
Query: 201 GAGEETP-PCYVLQIDEFKFLLDCGWDEKFD----MVFIKELKRHVNSIDAVLISHSDPL 365
G+G E C +L+ K + DCG + + F ++ + ID +L+SH
Sbjct: 42 GSGSEVGRSCVLLKYKGKKVMFDCGVHPAYSGLVSLPFFDSIESDIPDIDLLLVSHFHLD 101
Query: 366 HLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFD--LFTLDDVDMAFD 539
H A+PY VGK ++ T P + M + D Y N++ D LF D+D + +
Sbjct: 102 HAAAVPYFVGKTKFKGRVFMTHPTKAIYGMLLSD-YVKVSNITRDDDMLFDKSDLDRSLE 160
Query: 540 RIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
+I +++Y Q +E G+++T AGH LG
Sbjct: 161 KIEKVRYRQKVEHN----GIKVTCFNAGHVLG 188
>UniRef50_UPI00015BD54C Cluster: UPI00015BD54C related cluster; n=1;
unknown|Rep: UPI00015BD54C UniRef100 entry - unknown
Length = 451
Score = 65.3 bits (152), Expect = 1e-09
Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 13/165 (7%)
Frame = +3
Query: 180 IKLHCLSGAGEETPPCYVLQIDEFKFLLDCGWDEKFDMVFIKELKRHVNSIDAVLISHSD 359
+K+ A T ++L +D+ K L+DCG + D +EL +DAVL++H+
Sbjct: 1 MKVISYGAAKTVTGSAHMLILDDEKILIDCGLFQGVDEEKSEELGFDPKEVDAVLLTHAH 60
Query: 360 PLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDL-------YQAHK------NVSEF 500
H G +P + K G IY T P Y++ ++ + D Y++H + E
Sbjct: 61 IDHCGRIPMLI-KNGFKGKIYCTRPTYELSRLMLLDTAKVMLENYKSHMKRFQRGTIKEI 119
Query: 501 DLFTLDDVDMAFDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
L L D D F+ + + S + LG ++TP AGH LG
Sbjct: 120 PLEPLYDEDDVFEALEHFEPTFSYDKTYDILGAKVTPKDAGHILG 164
>UniRef50_Q8SUE4 Cluster: Putative uncharacterized protein
ECU10_0900; n=1; Encephalitozoon cuniculi|Rep: Putative
uncharacterized protein ECU10_0900 - Encephalitozoon
cuniculi
Length = 730
Score = 64.9 bits (151), Expect = 2e-09
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 2/154 (1%)
Frame = +3
Query: 180 IKLHCLSGAGEETPPCYVLQIDEFKFLLDCGWDEKFD-MVFIKELKR-HVNSIDAVLISH 353
IK+ L E C +++ +LDCG + M + L ++ IDAV I+H
Sbjct: 94 IKIMPLGAGNEVGRSCVIVECGGRTIMLDCGVHPAYTGMASLPFLDLVDLSKIDAVFITH 153
Query: 354 SDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFDLFTLDDVDMA 533
H ALP+ K +Y T P + + + D + S+ D +T D+
Sbjct: 154 FHLDHAAALPFLTEKTSFRGKVYMTHPTKAILKWLLNDYIRIINASSDTDFYTETDLVKC 213
Query: 534 FDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
+DRI+ + Y+Q + +K G+++ L AGH LG
Sbjct: 214 YDRIIPIDYHQEVNVK----GIKVKALNAGHVLG 243
>UniRef50_Q6BSP2 Cluster: Similar to CA3384|IPF8362 Candida albicans
IPF8362; n=1; Debaryomyces hansenii|Rep: Similar to
CA3384|IPF8362 Candida albicans IPF8362 - Debaryomyces
hansenii (Yeast) (Torulaspora hansenii)
Length = 959
Score = 63.7 bits (148), Expect = 4e-09
Identities = 41/136 (30%), Positives = 75/136 (55%), Gaps = 5/136 (3%)
Frame = +3
Query: 243 DEFKFLLDCGWDEKFDMVFIKELKRHVNSIDAVLISHSDPLHLGALPYAVGK---LGLSC 413
++ K L D W+ + I +++++ +D +L+SHS P + K L +
Sbjct: 25 NDIKILADPSWNGN-NHNDILYMEQYLKEVDIILLSHSTPEFISGFVLLCIKFPNLMSNI 83
Query: 414 PIYATLPVYKMGQMFMYDLYQAHKNVSEFD--LFTLDDVDMAFDRIVQLKYNQSIEMKGK 587
PIY+TLPV ++G++ + Y+A+ + + + +D+VD FD+I+ LK+ Q++ +
Sbjct: 84 PIYSTLPVNQLGRVSTVEYYRANGVLGPLNNSILEVDEVDEWFDKIIPLKFFQTLSVFDN 143
Query: 588 GLGLRITPLPAGHSLG 635
L ITP AGH+LG
Sbjct: 144 --RLVITPYNAGHTLG 157
>UniRef50_Q0UZX3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 934
Score = 62.9 bits (146), Expect = 6e-09
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 11/85 (12%)
Frame = +3
Query: 252 KFLLDCGWDEKFDMVFIKELK---------RHVNSIDAVLISHSDPLHLGALPYAVGKLG 404
K L+D GWDE FD+ +KE++ RHV+++ VL++H+ HLGA +
Sbjct: 28 KILIDVGWDESFDVAKLKEIERIQADVLFCRHVSTLSFVLLTHATTAHLGAYVHCCKNFP 87
Query: 405 L--SCPIYATLPVYKMGQMFMYDLY 473
L P+YAT+PV +G+ + DLY
Sbjct: 88 LFSRVPVYATVPVISLGRTLLQDLY 112
>UniRef50_Q4QA79 Cluster: Cleavage and polyadenylation specificity
factor, putative; n=3; Leishmania|Rep: Cleavage and
polyadenylation specificity factor, putative -
Leishmania major
Length = 828
Score = 61.7 bits (143), Expect = 1e-08
Identities = 39/147 (26%), Positives = 73/147 (49%), Gaps = 8/147 (5%)
Frame = +3
Query: 219 PPCYVLQIDEFKFLLDCGWDEKFDMVFIKELKRHVNSIDAVLISHSDPLHLGALPYAVGK 398
P Y++ ID + L DCGW+++FD F+ +LK H+ ++ AV++S GALP+ +
Sbjct: 23 PYAYLVDIDGVRILFDCGWNDEFDTSFLNKLKPHLPTVHAVVLSSPHITACGALPFVLSH 82
Query: 399 LGLSCPIYATLPVYKMG-----QMFMYDLYQAHK-NVSEFDLFTL--DDVDMAFDRIVQL 554
+ + A K+G F+Y +H +++ + FT+ D + +F R ++
Sbjct: 83 ISPGTFVAAAGGTSKIGVHSVLHSFLYQYPNSHTFTLADGEAFTMTVDSIYHSF-RSLRE 141
Query: 555 KYNQSIEMKGKGLGLRITPLPAGHSLG 635
Y + +K + + + AG LG
Sbjct: 142 PYGGKVTVKNDDVEVNCFAVFAGRMLG 168
>UniRef50_O13794 Cluster: Endoribonuclease ysh1; n=2;
Ascomycota|Rep: Endoribonuclease ysh1 -
Schizosaccharomyces pombe (Fission yeast)
Length = 775
Score = 61.7 bits (143), Expect = 1e-08
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 5/150 (3%)
Frame = +3
Query: 201 GAGEETP-PCYVLQIDEFKFLLDCGWDEKFD----MVFIKELKRHVNSIDAVLISHSDPL 365
GAG E C+V+Q +LD G + + F E ++++D +LISH
Sbjct: 43 GAGNEVGRSCHVIQYKGKTVMLDAGVHPAYTGLSALPFFDEFD--LSTVDVLLISHFHLD 100
Query: 366 HLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFDLFTLDDVDMAFDRI 545
H+ +LPY + K ++ T P + + + D + E L+ D+ AFDRI
Sbjct: 101 HVASLPYVMQKTNFRGRVFMTHPTKAVCKWLLSDYVKVSNVGMEDQLYDEKDLLAAFDRI 160
Query: 546 VQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
+ Y+ +IE++ G++ TP AGH LG
Sbjct: 161 EAVDYHSTIEVE----GIKFTPYHAGHVLG 186
>UniRef50_Q12102 Cluster: Protein CFT2; n=4; Saccharomyces
cerevisiae|Rep: Protein CFT2 - Saccharomyces cerevisiae
(Baker's yeast)
Length = 859
Score = 60.1 bits (139), Expect = 4e-08
Identities = 46/153 (30%), Positives = 78/153 (50%), Gaps = 9/153 (5%)
Frame = +3
Query: 192 CLSGAGEETPPCYVLQIDEFKFLLDCGWDEK---FDMVFIKELKRHVNSIDAVLISHSDP 362
C G+G T V++ D L+D GW+ ++ IK ++ + ID +++S
Sbjct: 8 CDDGSG--TTVGSVVRFDNVTLLIDPGWNPSKVSYEQC-IKYWEKVIPEIDVIILSQPTI 64
Query: 363 LHLGA---LPYAVGKLGLS-CPIYATLPVYKMGQMFMYDLYQAHKNVSEFDLFTLD--DV 524
LGA L Y +S +YATLPV +G++ D Y + + +D LD D+
Sbjct: 65 ECLGAHSLLYYNFTSHFISRIQVYATLPVINLGRVSTIDSYASAGVIGPYDTNKLDLEDI 124
Query: 525 DMAFDRIVQLKYNQSIEMKGKGLGLRITPLPAG 623
+++FD IV LKY+Q ++++ + GL + AG
Sbjct: 125 EISFDHIVPLKYSQLVDLRSRYDGLTLLAYNAG 157
>UniRef50_Q18IP5 Cluster: Predicted metal-dependent RNase, consists
of a metallo-beta-lactamase domain and an RNA-binding KH
domain; n=1; Haloquadratum walsbyi DSM 16790|Rep:
Predicted metal-dependent RNase, consists of a
metallo-beta-lactamase domain and an RNA-binding KH
domain - Haloquadratum walsbyi (strain DSM 16790)
Length = 538
Score = 59.3 bits (137), Expect = 8e-08
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 7/130 (5%)
Frame = +3
Query: 201 GAGEETP-PCYVLQIDEFKFLLDCGWDEKFDMVFIKELKRHVNSIDAVLISHSDPLHLGA 377
G G+E CY LQ ++ + +DCG + + IDAV I+H+ H+G
Sbjct: 10 GGGDEVGRSCYHLQAGDYDYFIDCGLKQSETPEYPLFEDVSQGQIDAVFITHAHIDHIGG 69
Query: 378 LPYAV--GKLGLSCPIYATLPVYKMGQMFMYDLYQAHK----NVSEFDLFTLDDVDMAFD 539
LP A G L I+ T P + + ++D Q HK +++ FT D++
Sbjct: 70 LPVAEHHGLLDDDASIFMTRPTNALASILLHDSLQIHKQETAELNQPQQFTATDIEQVLS 129
Query: 540 RIVQLKYNQS 569
RI+ + YN++
Sbjct: 130 RIMTIGYNRN 139
>UniRef50_Q750X1 Cluster: AGL182Cp; n=1; Eremothecium gossypii|Rep:
AGL182Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 803
Score = 57.6 bits (133), Expect = 2e-07
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 8/157 (5%)
Frame = +3
Query: 189 HCLSGAGEETPPCYVLQIDEFKFLLDCGWDE--KFDMVFIKELKRHVNSIDAVLISHSDP 362
+C +G T +L D L+D GW +D + K + +D +L+S
Sbjct: 7 YCKDESGSTTGT--ILSFDNCTLLIDPGWSGGCSYDEC-MAYWKEWIPQVDIILLSQPIQ 63
Query: 363 LHLGALPYA----VGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFDLFTLD--DV 524
+GA + +Y+TLPV +G++ DLY + + FD +D D+
Sbjct: 64 ECIGAYAALFFDYISHFNSRIQVYSTLPVANLGRVATVDLYASLGIIGPFDTNRIDIEDI 123
Query: 525 DMAFDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
D AFD + +KY+Q +++K + GL + +G + G
Sbjct: 124 DTAFDHLNTVKYSQLVDLKSRFDGLSLVAYSSGFAPG 160
>UniRef50_Q387M8 Cluster: Cleavage and polyadenylation specificity
factor, putative; n=2; Trypanosoma|Rep: Cleavage and
polyadenylation specificity factor, putative -
Trypanosoma brucei
Length = 818
Score = 57.2 bits (132), Expect = 3e-07
Identities = 40/149 (26%), Positives = 74/149 (49%), Gaps = 10/149 (6%)
Frame = +3
Query: 219 PPCYVLQIDEFKFLLDCGWDEKFDMVFIKELKRHVNSIDAVLISHSDPLHLGALPYAVGK 398
P Y+L+ID + L+DCGW++ F+ ++ L ++ + AVL S + GALP+ +
Sbjct: 28 PMAYLLEIDGVRILMDCGWNDGFETSYLDALLPYLGDLHAVLFSTPELSSCGALPFVMEH 87
Query: 399 LGLSCPIYATLPVYKMG-----QMFMY-----DLYQAHKNVSEFDLFTLDDVDMAFDRIV 548
+ + A KMG F+Y + ++ V EF++ T+D + AF R V
Sbjct: 88 ITAETHVAAAGATAKMGLHGLLHPFLYLFPNTNTWKLQSGV-EFEM-TVDKIYSAF-RSV 144
Query: 549 QLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
+ Y + ++ + + + P+ +G LG
Sbjct: 145 REPYGGKVTIRHRDVEVECFPVFSGRMLG 173
>UniRef50_Q5TA45 Cluster: Integrator complex subunit 11; n=29;
Eukaryota|Rep: Integrator complex subunit 11 - Homo
sapiens (Human)
Length = 600
Score = 57.2 bits (132), Expect = 3e-07
Identities = 45/154 (29%), Positives = 72/154 (46%), Gaps = 9/154 (5%)
Frame = +3
Query: 201 GAGEETP-PCYVLQIDEFKFLLDCGW------DEKF-DMVFIKELKRHVNSIDAVLISHS 356
GAG++ C ++ I +LDCG D +F D +I + R + +D V+ISH
Sbjct: 10 GAGQDVGRSCILVSIAGKNVMLDCGMHMGFNDDRRFPDFSYITQNGRLTDFLDCVIISHF 69
Query: 357 DPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQ-AHKNVSEFDLFTLDDVDMA 533
H GALPY +G PIY T P + + + D + A E + FT +
Sbjct: 70 HLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDKKGEANFFTSQMIKDC 129
Query: 534 FDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
++V + +Q++++ + L I AGH LG
Sbjct: 130 MKKVVAVHLHQTVQVDDE---LEIKAYYAGHVLG 160
>UniRef50_A7APS1 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 943
Score = 56.4 bits (130), Expect = 5e-07
Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 10/136 (7%)
Frame = +3
Query: 258 LLDCGWDEKFDMVFIKELKRHVNSIDAVLISHSDPLHLGALP--YA---VGKLGLSCP-I 419
L++CGW F+ I LK+ + +D ++++ D H+GALP Y+ V + GL P I
Sbjct: 98 LVNCGWSLDFEPESIDLLKQCCSDVDVIILTDGDFGHVGALPVIYSWLHVVRDGLGLPSI 157
Query: 420 YATLPVYKMGQMFMYDLYQAHKNVSEFDLFTLDDVDMAFDRIVQLKYNQSIEMKGKGLGL 599
T YK + + D+ +F+ + D+D+ + V L+Y +S G G
Sbjct: 158 LCTEGCYKFARACLVDVLDNATLSYKFEGYNFSDLDLFYSGCVTLRYRESFPFVKSGEGW 217
Query: 600 RI----TPLPAGHSLG 635
RI PL G S+G
Sbjct: 218 RIHISLLPLNNGVSIG 233
>UniRef50_Q7S0J8 Cluster: Putative uncharacterized protein
NCU06869.1; n=4; Sordariomycetes|Rep: Putative
uncharacterized protein NCU06869.1 - Neurospora crassa
Length = 1002
Score = 56.4 bits (130), Expect = 5e-07
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Frame = +3
Query: 231 VLQIDE-FKFLLDCGWDEKFDMVFIKELKRHVNSIDAVLISHSDPLHLGALPYAVGKLG- 404
+L++D K L+D GWDE FD+ +KEL + ++ +L++H+ HL A +
Sbjct: 20 LLELDGGVKILIDVGWDETFDVEKLKELGKQAPTLSLILLTHATVPHLAAYAHCCKHFPP 79
Query: 405 -LSCPIYATLPVYKMGQMFMYDLY 473
P+YAT PV +G+ DLY
Sbjct: 80 FQRIPVYATRPVIDLGRTLTQDLY 103
>UniRef50_Q74MJ3 Cluster: NEQ076; n=1; Nanoarchaeum equitans|Rep:
NEQ076 - Nanoarchaeum equitans
Length = 635
Score = 56.0 bits (129), Expect = 7e-07
Identities = 44/158 (27%), Positives = 76/158 (48%), Gaps = 6/158 (3%)
Frame = +3
Query: 180 IKLHCLSGAGEETPPCYVLQIDEFKFLLDCGWDEKF-----DMVFIKELKRH-VNSIDAV 341
+++ L GA + +LQ E + LLD G D + I EL V +DAV
Sbjct: 189 VRVSFLGGASQVGRSALLLQTKESRILLDFGVDLSLPPNNKNAYPIVELPEFDVKELDAV 248
Query: 342 LISHSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFDLFTLDD 521
+I+H+ H+G +P+ + K+G P+Y T P + + + D Y N + LF+ DD
Sbjct: 249 VITHAHLDHVGFVPF-LYKMGYKGPVYLTPPTLDIATLSLLD-YLRIANENNVKLFSGDD 306
Query: 522 VDMAFDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
+ + ++Y Q+ ++ +++T AGH LG
Sbjct: 307 IRNFVKHSITIEYGQTTDIAS---DVKLTFYNAGHILG 341
>UniRef50_A3ERC5 Cluster: Putative RNA-processing exonuclease; n=1;
Leptospirillum sp. Group II UBA|Rep: Putative
RNA-processing exonuclease - Leptospirillum sp. Group II
UBA
Length = 479
Score = 55.6 bits (128), Expect = 9e-07
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Frame = +3
Query: 216 TPPCYVLQIDEFKFLLDCGWDEKFDMVFIKELKR---HVNSIDAVLISHSDPLHLGALPY 386
T C++L +D F+ L+DCG + D +F LK +SI AV+++H+ H G LP
Sbjct: 13 TGSCHLLDVDGFRILIDCGLFQGEDELFSSNLKPFGFEPSSISAVILTHAHLDHCGRLPT 72
Query: 387 AVGKLGLSCPIYATLPVYKMGQMFMYD 467
V + G P+YAT P + ++ ++D
Sbjct: 73 LV-RQGFRGPVYATSPTRYLTEIVLWD 98
>UniRef50_A4CGY6 Cluster: Putative uncharacterized protein; n=4;
Flavobacteriales|Rep: Putative uncharacterized protein -
Robiginitalea biformata HTCC2501
Length = 458
Score = 55.2 bits (127), Expect = 1e-06
Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Frame = +3
Query: 180 IKLHCLSGAGEETPPCYVLQIDEFKFLLDCGWDEKFDMVFIKELKR---HVNSIDAVLIS 350
I +H L AG T Y+L + K L+DCG + + +K + +V IDAVL++
Sbjct: 6 INIHFLGAAGTVTGSKYLLDTGDRKILIDCGLFQGLKELRLKNWEYPPVNVTEIDAVLLT 65
Query: 351 HSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSE 497
H H G LP V K G PIY T P + ++ + D + + +E
Sbjct: 66 HGHLDHTGYLPRLV-KQGFKGPIYGTYPTLDIAKIILNDSAKIQEQEAE 113
>UniRef50_Q9U3K2 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 608
Score = 55.2 bits (127), Expect = 1e-06
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Frame = +3
Query: 201 GAGEETP-PCYVLQIDEFKFLLDCGW------DEKF-DMVFIKELKRHVNSIDAVLISHS 356
GAG++ C ++ I ++DCG D +F D +I R + +D V+ISH
Sbjct: 14 GAGQDVGRSCILITIGGKNIMVDCGMHMGYQDDRRFPDFSYIGGGGRLTDYLDCVIISHF 73
Query: 357 DPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNV-SEFDLFTLDDVDMA 533
H G+LP+ +G PIY T P + + + D + ++ E + FT DD+
Sbjct: 74 HLDHCGSLPHMSEIVGYDGPIYMTYPTKAICPVLLEDYRKVQCDIKGETNFFTSDDIKNC 133
Query: 534 FDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
++V ++ I + + L I AGH LG
Sbjct: 134 MKKVVGCALHEIIHVDNE---LSIRAFYAGHVLG 164
>UniRef50_Q8GUU3 Cluster: FEG protein; n=8; Magnoliophyta|Rep: FEG
protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 613
Score = 54.8 bits (126), Expect = 2e-06
Identities = 44/160 (27%), Positives = 71/160 (44%), Gaps = 10/160 (6%)
Frame = +3
Query: 186 LHCLS-GAGEET-PPCYVLQIDEFKFLLDCGWDEKFD-------MVFIKELKRHVNSIDA 338
+ CL GAG+E C V+ I+ K + DCG D I + N+I
Sbjct: 3 IDCLVLGAGQEIGKSCVVVTINGKKIMFDCGMHMGCDDHNRYPNFSLISKSGDFDNAISC 62
Query: 339 VLISHSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAH-KNVSEFDLFTL 515
++I+H H+GALPY G + PIY + P + + + D + E +LFT
Sbjct: 63 IIITHFHMDHVGALPYFTEVCGYNGPIYMSYPTKALSPLMLEDYRRVMVDRRGEEELFTT 122
Query: 516 DDVDMAFDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
+ +++ + Q+I++ L+I AGH LG
Sbjct: 123 THIANCMKKVIAIDLKQTIQVDE---DLQIRAYYAGHVLG 159
>UniRef50_A6NEN7 Cluster: Uncharacterized protein CPSF3L; n=16;
Theria|Rep: Uncharacterized protein CPSF3L - Homo
sapiens (Human)
Length = 277
Score = 54.4 bits (125), Expect = 2e-06
Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 9/136 (6%)
Frame = +3
Query: 201 GAGEETP-PCYVLQIDEFKFLLDCGW------DEKF-DMVFIKELKRHVNSIDAVLISHS 356
GAG++ C ++ I +LDCG D +F D +I + R + +D V+ISH
Sbjct: 10 GAGQDVGRSCILVSIAGKNVMLDCGMHMGFNDDRRFPDFSYITQNGRLTDFLDCVIISHF 69
Query: 357 DPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQ-AHKNVSEFDLFTLDDVDMA 533
H GALPY +G PIY T P + + + D + A E + FT +
Sbjct: 70 HLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDKKGEANFFTSQMIKDC 129
Query: 534 FDRIVQLKYNQSIEMK 581
++V + +Q++++K
Sbjct: 130 MKKVVAVHLHQTVQIK 145
>UniRef50_A4XI93 Cluster: Beta-lactamase domain protein; n=1;
Caldicellulosiruptor saccharolyticus DSM 8903|Rep:
Beta-lactamase domain protein - Caldicellulosiruptor
saccharolyticus (strain ATCC 43494 / DSM 8903)
Length = 821
Score = 54.0 bits (124), Expect = 3e-06
Identities = 41/148 (27%), Positives = 66/148 (44%), Gaps = 1/148 (0%)
Frame = +3
Query: 195 LSGAGEETPPCYVLQIDEFKFLLDCGWDEKFDMVFIKELKRHVNSIDAVLISHSDPLHLG 374
L GA E C +++ LLD G K D + +L R + D LISH+ H+G
Sbjct: 6 LGGAKEVGASCVLIKAGGKNILLDSGIRMKEDKLPNLQLLRELGGADVCLISHAHLDHIG 65
Query: 375 ALPYAVGKLGLSCPIYATLPVYKMGQMFMYD-LYQAHKNVSEFDLFTLDDVDMAFDRIVQ 551
+LP + + Y P + ++ +YD L E ++ +V+ DR +
Sbjct: 66 SLP-LIAREYPHIFFYTNQPTKDLIKVLLYDSLKIMDAKEDEIPIYAEKNVEDLLDRTIT 124
Query: 552 LKYNQSIEMKGKGLGLRITPLPAGHSLG 635
+N + E G+++T PAGH LG
Sbjct: 125 YGFNYTFEPLE---GIKVTFFPAGHILG 149
>UniRef50_A4S2M5 Cluster: Predicted protein; n=4; Viridiplantae|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 767
Score = 54.0 bits (124), Expect = 3e-06
Identities = 37/151 (24%), Positives = 71/151 (47%), Gaps = 6/151 (3%)
Frame = +3
Query: 201 GAGEETP-PCYVLQIDEFKFLLDCGWDEKF----DMVFIKELKRHVNSIDAVLISHSDPL 365
GAG E C + + + + DCG + + + E+ + +DA+ ++H
Sbjct: 18 GAGSEVGRSCVIARYKQKTLMFDCGIHPGYAGLASLPYFDEID--LADVDALFVTHFHLD 75
Query: 366 HLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFD-LFTLDDVDMAFDR 542
H A+P+ G+ + I+ T P + M M D + KN + LF D++ + +
Sbjct: 76 HCAAVPFLCGRTDFNGRIFMTHPTKAIYHMLMQDFCRLLKNQEPSEQLFGEKDLEASMKK 135
Query: 543 IVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
I + ++Q +++ G+++TP AGH LG
Sbjct: 136 IEVIDFHQEVDVD----GVKVTPYRAGHVLG 162
>UniRef50_Q5TA51 Cluster: Cleavage and polyadenylation specific
factor 3-like; n=2; Homo sapiens|Rep: Cleavage and
polyadenylation specific factor 3-like - Homo sapiens
(Human)
Length = 308
Score = 54.0 bits (124), Expect = 3e-06
Identities = 39/139 (28%), Positives = 66/139 (47%), Gaps = 9/139 (6%)
Frame = +3
Query: 201 GAGEETP-PCYVLQIDEFKFLLDCGW------DEKF-DMVFIKELKRHVNSIDAVLISHS 356
GAG++ C ++ I +LDCG D +F D +I + R + +D V+ISH
Sbjct: 29 GAGQDVGRSCILVSIAGKNVMLDCGMHMGFNDDRRFPDFSYITQNGRLTDFLDCVIISHF 88
Query: 357 DPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQ-AHKNVSEFDLFTLDDVDMA 533
H GALPY +G PIY T P + + + D + A E + FT +
Sbjct: 89 HLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDKKGEANFFTSQMIKDC 148
Query: 534 FDRIVQLKYNQSIEMKGKG 590
++V + +Q+++++ G
Sbjct: 149 MKKVVAVHLHQTVQVRFPG 167
>UniRef50_Q4UDL0 Cluster: Putative uncharacterized protein; n=3;
Theileria|Rep: Putative uncharacterized protein -
Theileria annulata
Length = 830
Score = 53.6 bits (123), Expect = 4e-06
Identities = 30/110 (27%), Positives = 57/110 (51%), Gaps = 6/110 (5%)
Frame = +3
Query: 258 LLDCGWDEKFDMVFIKELKRHVNSIDAVLISHSDPLHLGALPYAVGKL-----GLSCP-I 419
LL+CGW F + K++ ++D +LI+ D LH GAL + + G S P I
Sbjct: 39 LLNCGWSLDFSEEKLNLYKKYAQNVDVILITDGDFLHSGALLWLTSRFLTELKGKSIPKI 98
Query: 420 YATLPVYKMGQMFMYDLYQAHKNVSEFDLFTLDDVDMAFDRIVQLKYNQS 569
T YK + + D+ + ++F +++DD+++ V+L+Y+++
Sbjct: 99 LCTEGTYKFMRASLIDVLENVTFSTDFGYYSMDDLELLDSNCVKLRYSET 148
>UniRef50_Q9YEQ9 Cluster: Putative exonuclease; n=1; Aeropyrum
pernix|Rep: Putative exonuclease - Aeropyrum pernix
Length = 671
Score = 53.6 bits (123), Expect = 4e-06
Identities = 44/161 (27%), Positives = 73/161 (45%), Gaps = 6/161 (3%)
Frame = +3
Query: 171 TSIIKLHCLSGAGEETPPCYVLQIDEFKFLLDCGWD------EKFDMVFIKELKRHVNSI 332
T +++ L GE ++ E K LLD G + + + E + V+ +
Sbjct: 189 TRHVRVVGLGSFGEVGRSAILVDTGESKVLLDAGLSPSGYGPDSYPYYWSPEFR--VDEL 246
Query: 333 DAVLISHSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFDLFT 512
DAV+ISH+ H+G LP K G P+YAT P + + + DL + F
Sbjct: 247 DAVVISHAHLDHVGTLPLLF-KYGFRGPVYATPPTRDIMIIVLRDLINLMRKAQGEPPFE 305
Query: 513 LDDVDMAFDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
DV+ A R++ + YN ++ +++T + AGH LG
Sbjct: 306 PRDVEKALTRLIPVNYNTVTDV---APDIKMTFINAGHILG 343
>UniRef50_Q5BEP0 Cluster: Endoribonuclease ysh1; n=15;
Pezizomycotina|Rep: Endoribonuclease ysh1 - Emericella
nidulans (Aspergillus nidulans)
Length = 884
Score = 53.6 bits (123), Expect = 4e-06
Identities = 43/160 (26%), Positives = 69/160 (43%), Gaps = 8/160 (5%)
Frame = +3
Query: 180 IKLHCLSGAGEETPPCYVLQIDEFKFLLDCGWD---EKFDMV-FIKELKRHVNSIDAVLI 347
+ +CL G E C+++Q +LD G E F + F E ++++D +LI
Sbjct: 24 LAFYCLGGGNEVGRSCHIIQYKGKTVMLDAGMHPAKEGFSALPFFDEFD--LSTVDILLI 81
Query: 348 SHSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFD----LFTL 515
SH H ALPY + K ++ T + + + D + + S D L+T
Sbjct: 82 SHFHVDHSSALPYVLSKTNFKGRVFMTHATKAIYKWLIQDNVRVNNTASSSDQRTTLYTE 141
Query: 516 DDVDMAFDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
D I + +N + + +RITP PAGH LG
Sbjct: 142 HDHLSTLPLIETIDFNTTHTIN----SIRITPYPAGHVLG 177
>UniRef50_Q6FW78 Cluster: Candida glabrata strain CBS138 chromosome
D complete sequence; n=1; Candida glabrata|Rep: Candida
glabrata strain CBS138 chromosome D complete sequence -
Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 843
Score = 53.2 bits (122), Expect = 5e-06
Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 9/144 (6%)
Frame = +3
Query: 231 VLQIDEFKFLLDCGWDEKFDMVFIKELKRHVN---SIDAVLISHSDPLHLGALPYA---- 389
+L+ D LLD GW + + + + N +D +LIS LGA +
Sbjct: 19 ILRFDNVTILLDPGWSS-YKVSYEDSVAFWSNIIAEVDIILISQPTTECLGAYTFLYYNF 77
Query: 390 VGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFDL--FTLDDVDMAFDRIVQLKYN 563
+ +YATLPV +G++ + Y + + +DDV+ AFD I LKY+
Sbjct: 78 ISHFISHIQVYATLPVANLGRVSTIEFYVTKGIIGPYQTNQLDIDDVEKAFDFIDVLKYS 137
Query: 564 QSIEMKGKGLGLRITPLPAGHSLG 635
Q ++++ K GL + +G++ G
Sbjct: 138 QLVDLRSKYDGLSLFAYNSGYAPG 161
>UniRef50_Q4Q2K1 Cluster: Cleavage and polyadenylation specificity
factor, putative; n=7; Trypanosomatidae|Rep: Cleavage
and polyadenylation specificity factor, putative -
Leishmania major
Length = 756
Score = 52.8 bits (121), Expect = 7e-06
Identities = 43/151 (28%), Positives = 64/151 (42%), Gaps = 4/151 (2%)
Frame = +3
Query: 195 LSGAGEETPPCYVLQIDEFKFLLDCG---WDEKFDMV-FIKELKRHVNSIDAVLISHSDP 362
+ GE C V+Q +LDCG D + F +K + ID VLI+H
Sbjct: 31 IGSGGEVGRSCVVVQYKGRGVMLDCGNHPAKSGLDSLPFFDSIK--CDEIDVVLITHFHL 88
Query: 363 LHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFDLFTLDDVDMAFDR 542
H GALPY + ++ T +M M D + S DL T + + DR
Sbjct: 89 DHCGALPYFCNQTSFKGRVFMTSATKAFYKMVMNDFLRIGAGAS--DLVTSEWLQSTIDR 146
Query: 543 IVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
I ++Y++ + + G+ P AGH LG
Sbjct: 147 IETVEYHEEVTVN----GISFQPFNAGHVLG 173
>UniRef50_A2FCF8 Cluster: RNA-metabolising metallo-beta-lactamase
family protein; n=1; Trichomonas vaginalis G3|Rep:
RNA-metabolising metallo-beta-lactamase family protein -
Trichomonas vaginalis G3
Length = 679
Score = 52.8 bits (121), Expect = 7e-06
Identities = 41/151 (27%), Positives = 74/151 (49%), Gaps = 6/151 (3%)
Frame = +3
Query: 201 GAGEETP-PCYVLQIDEFKFLLDCGWDEKFD----MVFIKELKRHVNSIDAVLISHSDPL 365
GAG+E C +L+ + +LDCG ++ + FI + ID +LI+H
Sbjct: 17 GAGQEVGRSCIILKYHRKRVMLDCGIHPAYENFGGLPFIDAIDPA--KIDVLLITHFHID 74
Query: 366 HLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYD-LYQAHKNVSEFDLFTLDDVDMAFDR 542
H+ A+P+ + + S P + T + + + D + + + E +LFT DV +
Sbjct: 75 HITAVPWFLTQTNFSGPCFMTHTTKTISKTLLVDYVGVSGRGSEEPNLFTRADVANVQNM 134
Query: 543 IVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
I + Y+Q++ + G+++T PAGH LG
Sbjct: 135 ITAVNYHQTVTHQ----GIKMTCYPAGHVLG 161
>UniRef50_A0BGT5 Cluster: Chromosome undetermined scaffold_106,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_106,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 690
Score = 52.8 bits (121), Expect = 7e-06
Identities = 40/151 (26%), Positives = 65/151 (43%), Gaps = 6/151 (3%)
Frame = +3
Query: 201 GAGEETP-PCYVLQIDEFKFLLDCGWD---EKFDMVFIKELKR--HVNSIDAVLISHSDP 362
GAG E C +LQ E + + DCG E ++ + + + ID +LI+H
Sbjct: 14 GAGNEVGRSCILLQFQEKQIMFDCGIHMNKENKGVMALPYFNKIDKIEDIDLILITHFHL 73
Query: 363 LHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFDLFTLDDVDMAFDR 542
H GALPY + IY T P ++ + + D + DL ++ +
Sbjct: 74 DHCGALPYFLKNYKFKGKIYMTTPTKEIYGLVLKDSIKVKSEDFSQDLINEQSIEQSLKN 133
Query: 543 IVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
I + Y+Q I + G+++ AGH LG
Sbjct: 134 IDCIDYDQEIHYQ----GIKLKCYNAGHVLG 160
>UniRef50_A1RWY8 Cluster: Beta-lactamase domain protein; n=1;
Thermofilum pendens Hrk 5|Rep: Beta-lactamase domain
protein - Thermofilum pendens (strain Hrk 5)
Length = 639
Score = 52.0 bits (119), Expect = 1e-05
Identities = 38/138 (27%), Positives = 68/138 (49%), Gaps = 3/138 (2%)
Frame = +3
Query: 231 VLQIDEFKFLLDCGWDE--KFDMVFIKELKRH-VNSIDAVLISHSDPLHLGALPYAVGKL 401
++Q E LLD G D + + +L + S+DAV+I+H+ H+GALP + K
Sbjct: 197 LVQTPEANILLDAGLKPTGNGDELPLFDLPEFDLESLDAVVITHAHLDHVGALP-VLFKY 255
Query: 402 GLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFDLFTLDDVDMAFDRIVQLKYNQSIEMK 581
G P+Y T P + ++ D + + + +L+++ DV+ L Y + ++
Sbjct: 256 GYKGPVYMTEPTLHLSKLLFEDYIKVAQREGKNELYSMRDVNSLLLNTYTLSYGEVTDIA 315
Query: 582 GKGLGLRITPLPAGHSLG 635
+ +R+T AGH LG
Sbjct: 316 PE---IRLTFYRAGHILG 330
>UniRef50_A5ZRP6 Cluster: Putative uncharacterized protein; n=4;
Bacteria|Rep: Putative uncharacterized protein -
Ruminococcus obeum ATCC 29174
Length = 539
Score = 51.6 bits (118), Expect = 2e-05
Identities = 44/166 (26%), Positives = 77/166 (46%), Gaps = 14/166 (8%)
Frame = +3
Query: 180 IKLHCLSGAGEETPPCYVLQIDEFKFLLDCGWDEKFDMVFIKELKRHVNSIDAVLISHSD 359
+K+ + E T CY L+ KFL+DCG ++ D +++ + +D VL++H+
Sbjct: 1 MKITFIGATHEVTGSCYYLEAAGKKFLVDCGMEQGPDYYENQDIPVKGSDLDFVLLTHAH 60
Query: 360 PLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYD-----LYQA--------HKNVSEF 500
H G LP A+ G PIYAT + + + D +++A + EF
Sbjct: 61 MDHSGNLP-AIYAKGFQGPIYATQATCHLCDIMLRDSAHIQMFEAEWRNRKGRRQGKPEF 119
Query: 501 -DLFTLDDVDMAFDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
+T++D V Y ++I+ +G+ +R + AGH LG
Sbjct: 120 VPAYTMEDAMGVIQNFVPCPYEKTIK-PAEGISVRF--VDAGHLLG 162
>UniRef50_A3HWA3 Cluster: Metallo-beta-lactamase family protein;
n=1; Algoriphagus sp. PR1|Rep: Metallo-beta-lactamase
family protein - Algoriphagus sp. PR1
Length = 482
Score = 50.8 bits (116), Expect = 3e-05
Identities = 39/163 (23%), Positives = 76/163 (46%), Gaps = 16/163 (9%)
Frame = +3
Query: 195 LSGAGEETPPCYVLQIDEFKFLLDCGWDEKFDMVFIKELKRH---VNSIDAVLISHSDPL 365
L GAG T Y++ + +F+FL+DCG + + + + ++A++++H+
Sbjct: 24 LGGAGAVTGSKYLIDLGDFEFLVDCGLYQGAKNLRKRNWDKFPMPPTDMEAIILTHAHLD 83
Query: 366 HLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEF-------------DL 506
H+G LP V K G PIY T ++ ++ + D + + +E+ L
Sbjct: 84 HVGYLPKLV-KQGFKGPIYCTEATAELAKILLLDSGKLQEEEAEYARKKGYSRHESPEPL 142
Query: 507 FTLDDVDMAFDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
+T DD + F ++V ++ ++ + +T AGH LG
Sbjct: 143 YTRDDAESVFPQLVPQQFETPFQINP---NVSVTYYHAGHILG 182
>UniRef50_A2D958 Cluster: RNA-metabolising metallo-beta-lactamase
family protein; n=1; Trichomonas vaginalis G3|Rep:
RNA-metabolising metallo-beta-lactamase family protein -
Trichomonas vaginalis G3
Length = 588
Score = 50.8 bits (116), Expect = 3e-05
Identities = 44/156 (28%), Positives = 66/156 (42%), Gaps = 5/156 (3%)
Frame = +3
Query: 183 KLHCLSGAGEETPPCYVLQIDEFKFLLDCG-----WDEKFDMVFIKELKRHVNSIDAVLI 347
+L C GE +++I K LLDCG DEK + ++ +D VLI
Sbjct: 14 QLICFGAGGEVGRSSILVEIGSKKVLLDCGVNFTATDEKDRLPAYQD---PFPKVDLVLI 70
Query: 348 SHSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFDLFTLDDVD 527
SH HL A+PY L P+Y T + QM M + V+E + +D+
Sbjct: 71 SHIHTDHLAAVPYLTEVLKCQAPVYMT----RASQMMMPIMLDDFLKVTENPPYKAEDLT 126
Query: 528 MAFDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
+I +++ E G+ + PAGH LG
Sbjct: 127 NCKPKIKVVEFYSRFE---AAPGIFVQAFPAGHILG 159
>UniRef50_Q6CNJ8 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome E of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 812
Score = 50.8 bits (116), Expect = 3e-05
Identities = 36/142 (25%), Positives = 71/142 (50%), Gaps = 7/142 (4%)
Frame = +3
Query: 231 VLQIDEFKFLLDCGWDEKFDMVFIKEL-KRHVNSIDAVLISHSDPLHLGALPYAVGKL-- 401
+++ + LLD GW+ + +E ++++ +D VLIS LG+ +
Sbjct: 19 IVRFNNVIVLLDPGWNGEGSYEECEEFWTQYISEVDIVLISQPTIECLGSYAMMFKQFLP 78
Query: 402 --GLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFD--LFTLDDVDMAFDRIVQLKYNQS 569
+Y TLPV +G++ DL + + F + L+D++ +FD I +KY+Q+
Sbjct: 79 HFRSRIQVYGTLPVSNLGRVNSVDLLTSVGILGPFSNAVMDLEDIESSFDLIETVKYSQT 138
Query: 570 IEMKGKGLGLRITPLPAGHSLG 635
+++K K GL + +G++ G
Sbjct: 139 VDLKNKFDGLSLEAHNSGYAPG 160
>UniRef50_Q2LYC2 Cluster: Metallo-beta-lactamase protein; n=6;
Deltaproteobacteria|Rep: Metallo-beta-lactamase protein
- Syntrophus aciditrophicus (strain SB)
Length = 541
Score = 50.4 bits (115), Expect = 4e-05
Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 17/170 (10%)
Frame = +3
Query: 177 IIKLHCLSGAGEETPPCYVLQIDEFKFLLDCGWDEKFDMVFIKELKRHV---NSIDAVLI 347
I+K+ L A T CY+L+ +F +DCG + + + + + I+ LI
Sbjct: 6 IMKIKFLGAARTVTGSCYILETQGHRFAIDCGMHQGNEEIEKRNWNVELYEPEKIEFFLI 65
Query: 348 SHSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEF--------- 500
+H+ H G LP V K G PIYAT P + ++ + D + +++
Sbjct: 66 THAHIDHTGLLPRLVQK-GFRGPIYATQPTVDLLRILLLDSAHIQEMEAQWKSRKRLRFG 124
Query: 501 -----DLFTLDDVDMAFDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
L+T D + F + + Y++ E GL++ + AGH LG
Sbjct: 125 EKRVGPLYTQRDAEAVFPMLKSVSYDKPFE---PFPGLKVNFMDAGHILG 171
>UniRef50_A5N1D0 Cluster: Putative uncharacterized protein; n=1;
Clostridium kluyveri DSM 555|Rep: Putative
uncharacterized protein - Clostridium kluyveri DSM 555
Length = 832
Score = 50.4 bits (115), Expect = 4e-05
Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 3/125 (2%)
Frame = +3
Query: 195 LSGAGEETPPCYVLQIDEFKFLLDCGWDEKFDMVFIKELK--RHVNSIDAVLISHSDPLH 368
L GA E C +++I L+DCG + + + K + IDA++ISHS H
Sbjct: 10 LGGAREVGGSCILVKIYNRNILMDCGIRQSSSKDALPDFKSIQEQGGIDAIIISHSHMDH 69
Query: 369 LGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKN-VSEFDLFTLDDVDMAFDRI 545
+G+LP + L+ IYAT + ++ +YD + N E L+ DV + I
Sbjct: 70 IGSLPIISKEYPLA-RIYATKMTKDLMRVLLYDSLKIMNNREGEIPLYAESDVKNMLNSI 128
Query: 546 VQLKY 560
+ Y
Sbjct: 129 FPINY 133
>UniRef50_Q06224 Cluster: Endoribonuclease YSH1; n=10; Fungi/Metazoa
group|Rep: Endoribonuclease YSH1 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 779
Score = 50.4 bits (115), Expect = 4e-05
Identities = 39/167 (23%), Positives = 74/167 (44%), Gaps = 12/167 (7%)
Frame = +3
Query: 171 TSIIKLHCLSGAGEETPPCYVLQIDEFKFLLDCGWDEKFD----MVFIKELKRHVNSIDA 338
T+ K L G+ E C++LQ +LD G + + F E ++ +D
Sbjct: 6 TTTFKFFSLGGSNEVGRSCHILQYKGKTVMLDAGIHPAYQGLASLPFYDEFD--LSKVDI 63
Query: 339 VLISHSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQ--------AHKNVS 494
+LISH H +LPY + + ++ T P + + + D + +
Sbjct: 64 LLISHFHLDHAASLPYVMQRTNFQGRVFMTHPTKAIYRWLLRDFVRVTSIGSSSSSMGTK 123
Query: 495 EFDLFTLDDVDMAFDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
+ LF+ +D+ +FD+I + Y+ ++++ G++ T AGH LG
Sbjct: 124 DEGLFSDEDLVDSFDKIETVDYHSTVDVN----GIKFTAFHAGHVLG 166
>UniRef50_Q95PY8 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 707
Score = 50.0 bits (114), Expect = 5e-05
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 7/152 (4%)
Frame = +3
Query: 201 GAGEETP-PCYVLQIDEFKFLLDCGWDEKFDMV----FIKELKRHVNSIDAVLISHSDPL 365
G+G+E C++L+ + +LDCG V F+ ++ + +ID +LI+H
Sbjct: 17 GSGQEVGRSCHLLEYKGKRVMLDCGVHPGLHGVDALPFVDFVE--IENIDLLLITHFHLD 74
Query: 366 HLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHK--NVSEFDLFTLDDVDMAFD 539
H GALP+ + K + T + +M + D + K L+T DD++ +
Sbjct: 75 HCGALPWLLQKTAFQGKCFMTHATKAIYRMLLGDYVRISKYGGPDRNQLYTEDDLEKSMA 134
Query: 540 RIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
+I + + + E+ G+R P AGH LG
Sbjct: 135 KIETIDFREQKEVN----GIRFWPYVAGHVLG 162
>UniRef50_A7TEK7 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 821
Score = 50.0 bits (114), Expect = 5e-05
Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Frame = +3
Query: 231 VLQIDEFKFLLDCGWDEKFDMVF--IKELKRHVNSIDAVLISHSDPLHLGA---LPYA-V 392
+++ D L+D W+ K IK + +D +L+S LGA L Y V
Sbjct: 19 IVRFDNVTILIDPSWNGKNVSYADSIKYWSTIIPEVDIILLSQPSLECLGAYSMLYYNFV 78
Query: 393 GKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFDL--FTLDDVDMAFDRIVQLKYNQ 566
+YATLPV +G++ + + Y + ++ L+D++ +FD I +KY+Q
Sbjct: 79 SHFVSRIDVYATLPVSNLGRISVIEQYACAGIIGPYETNEMDLEDIEKSFDNIKTVKYSQ 138
Query: 567 SIEMKGKGLGLRITPLPAGHSLG 635
++++ K GL + +G + G
Sbjct: 139 LVDLRSKFDGLTLVAYNSGVNAG 161
>UniRef50_Q58633 Cluster: Uncharacterized protein MJ1236; n=16;
Euryarchaeota|Rep: Uncharacterized protein MJ1236 -
Methanococcus jannaschii
Length = 634
Score = 49.6 bits (113), Expect = 6e-05
Identities = 37/157 (23%), Positives = 68/157 (43%), Gaps = 5/157 (3%)
Frame = +3
Query: 180 IKLHCLSGAGEETPPCYVLQIDEFKFLLDCG-----WDEKFDMVFIKELKRHVNSIDAVL 344
I++ L GA E C +Q + + L+DCG D+ F E + +DAV+
Sbjct: 180 IRVSFLGGAREVGRSCLYVQTPDTRVLIDCGINVACEDKAFPHFDAPEFS--IEDLDAVI 237
Query: 345 ISHSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFDLFTLDDV 524
++H+ H G +P + + G P+Y T P + + D + K + +T D+
Sbjct: 238 VTHAHLDHCGFIP-GLFRYGYDGPVYCTRPTRDLMTLLQKDYLEIAKKEGKEVPYTSKDI 296
Query: 525 DMAFDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
+ + Y + ++ +++T AGH LG
Sbjct: 297 KTCVKHTIPIDYGVTTDISPT---IKLTLHNAGHVLG 330
>UniRef50_Q24CH6 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 749
Score = 49.2 bits (112), Expect = 8e-05
Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 10/141 (7%)
Frame = +3
Query: 243 DEFKFLLDCGWDEKFDMVFIKELKRHVNSIDAVLISHSDPLHLGALPYAVG-----KLGL 407
+E LLDCG + D + + +D +L+SH ++GALP+ + G
Sbjct: 25 EEIYILLDCGLNSNMDFTAYWQNIEKLKKVDMILLSHVGAEYVGALPFLLNNKQIMSQGK 84
Query: 408 SCPIYATLPVYKMGQMFMYDLY-QAHKNVSEFDLF----TLDDVDMAFDRIVQLKYNQSI 572
+ IY+T PV K+G Y+ Y SE + + +A+DR +++ Q
Sbjct: 85 NIRIYSTTPVMKLGMFNSYNQYLNTMMLASEEETLVTEKSFQKFYIAYDRCKVIQFFQKK 144
Query: 573 EMKGKGLGLRITPLPAGHSLG 635
+ K + I+P G++LG
Sbjct: 145 VVHIKDKDIIISPNCIGNTLG 165
>UniRef50_A7DQ83 Cluster: Beta-lactamase domain protein; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep:
Beta-lactamase domain protein - Candidatus
Nitrosopumilus maritimus SCM1
Length = 646
Score = 49.2 bits (112), Expect = 8e-05
Identities = 40/157 (25%), Positives = 65/157 (41%), Gaps = 5/157 (3%)
Frame = +3
Query: 180 IKLHCLSGAGEETPPCYVLQIDEFKFLLDCGWD----EKFD-MVFIKELKRHVNSIDAVL 344
+ L+ L G G+ +L E K L+DCG + D + L ++ +DAV+
Sbjct: 189 VSLYTLGGFGQVGRSSLLLSTPESKILIDCGINPGARSPMDAFPRLDSLNLTLDDLDAVV 248
Query: 345 ISHSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFDLFTLDDV 524
I H+ H G LP + K G PIY T P M + D + +++ DV
Sbjct: 249 IGHAHLDHTGFLP-TLCKYGYKGPIYCTEPTLPMMNLIQLDAIKVAAAQGRTPIYSERDV 307
Query: 525 DMAFDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
+ + L Y ++ +++ AGH LG
Sbjct: 308 KQIMRQTITLPYGTVTDISP---DIKLVLANAGHILG 341
>UniRef50_Q5CRW9 Cluster: CPSF metallobeta-lactamase; n=2;
Cryptosporidium|Rep: CPSF metallobeta-lactamase -
Cryptosporidium parvum Iowa II
Length = 751
Score = 48.8 bits (111), Expect = 1e-04
Identities = 49/175 (28%), Positives = 77/175 (44%), Gaps = 30/175 (17%)
Frame = +3
Query: 201 GAGEETP-PCYVLQIDEFKFLLDCGW-----DEK----FDMVFIKELKRHVNS-IDAVLI 347
GAG++ C + +I + DCG DE+ F ++ +N ID V+I
Sbjct: 11 GAGQDVGRSCIIAKIGSKTVMFDCGMHMGFKDERKYPDFRLISATLDPLIINEYIDLVII 70
Query: 348 SHSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYD--------LYQAHKNV---- 491
SH H GALP+ K+G PI T P + + + D L NV
Sbjct: 71 SHYHLDHCGALPFFTEKIGYKGPIVMTYPTKSVSSVLLSDCCKIMEQKLLLQKTNVDVAP 130
Query: 492 -------SEFDLFTLDDVDMAFDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
+E+ FT+ DV +++ ++ +Q+I + G++ITP AGH LG
Sbjct: 131 PNETVYNNEYGFFTVSDVWSCMEKVKAIQLHQTIVIS----GIKITPYYAGHVLG 181
>UniRef50_A1RTJ6 Cluster: Beta-lactamase domain protein; n=1;
Pyrobaculum islandicum DSM 4184|Rep: Beta-lactamase
domain protein - Pyrobaculum islandicum (strain DSM 4184
/ JCM 9189)
Length = 640
Score = 48.4 bits (110), Expect = 1e-04
Identities = 38/152 (25%), Positives = 68/152 (44%), Gaps = 5/152 (3%)
Frame = +3
Query: 195 LSGAGEETPPCYVLQIDEFKFLLDCG-----WDEKFDMVFIKELKRHVNSIDAVLISHSD 359
L A E ++ E LLDCG +DE F ++ ++ R +DAV+++H+
Sbjct: 185 LGAAMEVGRSAILVSTTESNILLDCGLKPGQYDEDFPLLDAVDIDR----LDAVVLTHAH 240
Query: 360 PLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFDLFTLDDVDMAFD 539
H+G LP+ + K G P+Y T P + + D + + F+ DV+
Sbjct: 241 MDHVGCLPF-LYKYGYRGPVYMTDPTKYQTFILLMDYIELKEREGLEPAFSRADVESVIY 299
Query: 540 RIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
+ L Y + ++ +++T AGH +G
Sbjct: 300 HTITLDYEEVTDI---APDVKLTFYDAGHEIG 328
>UniRef50_Q5KCZ0 Cluster: Endoribonuclease YSH1; n=2; cellular
organisms|Rep: Endoribonuclease YSH1 - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 773
Score = 48.4 bits (110), Expect = 1e-04
Identities = 48/156 (30%), Positives = 71/156 (45%), Gaps = 11/156 (7%)
Frame = +3
Query: 201 GAGEETP-PCYVLQIDEFKFLLDCGWDEKFDMV----FIKELKRHVNSIDAVLISHSDPL 365
GAG+E C V++ K + D G + FI EL +++DA+LI+H
Sbjct: 35 GAGQEVGRSCCVIEHRGKKIVCDAGLHPAQPGIGALPFIDELDW--STVDAMLITHFHVD 92
Query: 366 HLGALPYAVGKL------GLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFDLFTLDDVD 527
H ALPY + K G +AT +Y + M L + + S L+ DV
Sbjct: 93 HAAALPYIMEKTNFKDGNGKVYMTHATKAIYGLTMMDTVRLNDQNPDTSG-RLYDEADVQ 151
Query: 528 MAFDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
++ + + Y+Q I + G GLR TP AGH LG
Sbjct: 152 SSWQSTIAVDYHQDIVIAG---GLRFTPYHAGHVLG 184
>UniRef50_UPI00015BA9DD Cluster: beta-lactamase domain protein; n=1;
Ignicoccus hospitalis KIN4/I|Rep: beta-lactamase domain
protein - Ignicoccus hospitalis KIN4/I
Length = 652
Score = 48.0 bits (109), Expect = 2e-04
Identities = 39/158 (24%), Positives = 72/158 (45%), Gaps = 3/158 (1%)
Frame = +3
Query: 171 TSIIKLHCLSGAGEETPPCYVLQIDEFKFLLDCGWDE-KFDMV--FIKELKRHVNSIDAV 341
T+ +++ L E +L+ E K LLD G + +D F K + ++ +DAV
Sbjct: 179 TNYVRITALGAFKEVGRSAILLETKESKVLLDFGANVGSYDPQKHFPKVEEVPIDELDAV 238
Query: 342 LISHSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFDLFTLDD 521
+++H+ H G +P+ + K G P+Y T P + + D + + + +T D
Sbjct: 239 IVTHAHLDHCGLVPW-LYKYGYRGPVYVTQPTRDLMYLVQKDYIEVARKEGKPVPYTESD 297
Query: 522 VDMAFDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
++ R + L Y E+ +++T AGH LG
Sbjct: 298 INSMLLRTIALNYG---EVTDVAPDIKLTFYNAGHILG 332
>UniRef50_Q0LL72 Cluster: Beta-lactamase-like; n=3; Herpetosiphon
aurantiacus ATCC 23779|Rep: Beta-lactamase-like -
Herpetosiphon aurantiacus ATCC 23779
Length = 786
Score = 48.0 bits (109), Expect = 2e-04
Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 10/163 (6%)
Frame = +3
Query: 177 IIKLHCLSGAGEETPPCYVLQIDEFKFLLDCGWDE-----KFDMVFIKELKRHVNSIDAV 341
+I H GA E C +L++ L+D G + ++ LK +DA+
Sbjct: 1 MISFHPFGGAQEVGASCGILKLGMRHILVDAGMRPAARPGQSRTPDLEALKGF--PLDAI 58
Query: 342 LISHSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYD----LYQAH-KNVSEFDL 506
LI+H+ H G LP V L + PIYAT + ++ + D + Q H + E L
Sbjct: 59 LITHAHIDHTGCLPL-VASLFPTVPIYATESTIALMRILLLDSARIMEQEHLAHELETPL 117
Query: 507 FTLDDVDMAFDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
+ V RI+ + ++Q + + +T LPAGH LG
Sbjct: 118 YDQAMVTETLARIIPVAFHQELRPVAANQEISVTYLPAGHILG 160
>UniRef50_A6C193 Cluster: Exonuclease of the beta-lactamase fold
involved in RNA processing; n=1; Planctomyces maris DSM
8797|Rep: Exonuclease of the beta-lactamase fold
involved in RNA processing - Planctomyces maris DSM 8797
Length = 464
Score = 48.0 bits (109), Expect = 2e-04
Identities = 46/168 (27%), Positives = 73/168 (43%), Gaps = 16/168 (9%)
Frame = +3
Query: 180 IKLHCLSGAGEETPPCYVLQIDEFKFLLDCGWDEKFDMVFIKELKRHV---NSIDAVLIS 350
+K+ L AGE T ++++ D + LLDCG + + R S+DAV +S
Sbjct: 1 MKITFLGAAGEVTGSQHLIETDSRRILLDCGLFQGHRQESYLKNSRFAYPPESLDAVFLS 60
Query: 351 HSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYD---------LYQAHKNVSEF- 500
H H G LP K G P++ T + ++ + D Y A K +
Sbjct: 61 HGHMDHCGNLPRLFNK-GFRGPVFCTSATADIAEIMLKDSARIQEEDARYLARKLTDKHP 119
Query: 501 ---DLFTLDDVDMAFDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
L++ DDV + +L+Y + E+ G L++ L AGH LG
Sbjct: 120 PIEPLYSEDDVTAVAKQFERLEYQEWHEL---GDDLKVRFLDAGHILG 164
>UniRef50_Q9UKF6 Cluster: Cleavage and polyadenylation specificity
factor subunit 3; n=53; Eumetazoa|Rep: Cleavage and
polyadenylation specificity factor subunit 3 - Homo
sapiens (Human)
Length = 684
Score = 48.0 bits (109), Expect = 2e-04
Identities = 44/150 (29%), Positives = 70/150 (46%), Gaps = 5/150 (3%)
Frame = +3
Query: 201 GAGEETP-PCYVLQIDEFKFLLDCGWD---EKFDMVFIKELKRHVNSIDAVLISHSDPLH 368
GAG+E C +L+ K +LDCG E D + +L ID +LISH H
Sbjct: 18 GAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPAE-IDLLLISHFHLDH 76
Query: 369 LGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFD-LFTLDDVDMAFDRI 545
GALP+ + K + T + + + D Y N+S D L+T D++ + D+I
Sbjct: 77 CGALPWFLQKTSFKGRTFMTHATKAIYRWLLSD-YVKVSNISADDMLYTETDLEESMDKI 135
Query: 546 VQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
+ +++ E+ G++ AGH LG
Sbjct: 136 ETINFHEVKEV----AGIKFWCYHAGHVLG 161
>UniRef50_Q11PK2 Cluster: Metallo-beta-lactamase superfamily
protein; n=1; Cytophaga hutchinsonii ATCC 33406|Rep:
Metallo-beta-lactamase superfamily protein - Cytophaga
hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 451
Score = 47.2 bits (107), Expect = 3e-04
Identities = 39/157 (24%), Positives = 77/157 (49%), Gaps = 5/157 (3%)
Frame = +3
Query: 180 IKLHCLSGAGEETPPCYVLQIDEFKFLLDCGWD--EKFDMVFIKELKRHVNSIDAVLISH 353
+KL A + T Y+L+ +K L+DCG D ++ ++ + ID V+++H
Sbjct: 1 MKLTFWGAARKVTGSMYLLESLGYKILIDCGSDFSDRHKVLTGGLFPFEASEIDLVILTH 60
Query: 354 SDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYD---LYQAHKNVSEFDLFTLDDV 524
+ H G +P A+ + G I +T P ++ ++ D + +A K ++ + D
Sbjct: 61 AHVDHSGNIP-ALIRAGYRGQILSTAPTAELSELLFADSAYIQRAEKKIA--NSAPSDYS 117
Query: 525 DMAFDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
DR + + +N+ E+ + + +R+TP+ GH LG
Sbjct: 118 YKPVDRFIPIAFNKDFELNER-ITVRLTPV--GHILG 151
>UniRef50_Q5TA44 Cluster: Cleavage and polyadenylation specific
factor 3-like; n=4; Eutheria|Rep: Cleavage and
polyadenylation specific factor 3-like - Homo sapiens
(Human)
Length = 401
Score = 47.2 bits (107), Expect = 3e-04
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 8/97 (8%)
Frame = +3
Query: 201 GAGEETP-PCYVLQIDEFKFLLDCGW------DEKF-DMVFIKELKRHVNSIDAVLISHS 356
GAG++ C ++ I +LDCG D +F D +I + R + +D V+ISH
Sbjct: 22 GAGQDVGRSCILVSIAGKNVMLDCGMHMGFNDDRRFPDFSYITQNGRLTDFLDCVIISHF 81
Query: 357 DPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYD 467
H GALPY +G PIY T P + + + D
Sbjct: 82 HLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLED 118
>UniRef50_Q8ZYD9 Cluster: MRNA 3'-end processing factor,
conjectural; n=4; Thermoproteaceae|Rep: MRNA 3'-end
processing factor, conjectural - Pyrobaculum aerophilum
Length = 634
Score = 47.2 bits (107), Expect = 3e-04
Identities = 36/152 (23%), Positives = 69/152 (45%), Gaps = 5/152 (3%)
Frame = +3
Query: 195 LSGAGEETPPCYVLQIDEFKFLLDCGW-----DEKFDMVFIKELKRHVNSIDAVLISHSD 359
L A E ++ E LLDCG DE+F ++ + ++ R +DAV+++H+
Sbjct: 179 LGAAMEVGRSAILVSTTESNVLLDCGLKPAQNDEEFPLLDLIDIDR----LDAVVLTHAH 234
Query: 360 PLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFDLFTLDDVDMAFD 539
H+G LP+ + K G P+Y T P + + D + + ++ D++
Sbjct: 235 MDHVGCLPF-LFKYGYKGPVYMTDPTKYQAFILLSDYVELKEREGLQPSYSKADIETVIY 293
Query: 540 RIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
+ L Y + ++ +++T AGH +G
Sbjct: 294 HTITLDYEEVTDI---APDIKLTFYDAGHEIG 322
>UniRef50_Q4PEJ3 Cluster: Endoribonuclease YSH1; n=6; Fungi/Metazoa
group|Rep: Endoribonuclease YSH1 - Ustilago maydis (Smut
fungus)
Length = 880
Score = 47.2 bits (107), Expect = 3e-04
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 8/153 (5%)
Frame = +3
Query: 201 GAGEETP-PCYVLQIDEFKFLLDCGWDEKFDMV----FIKELKRHVNSIDAVLISHSDPL 365
GAG+E C VL+ + D G F + FI EL +++DA+LI+H
Sbjct: 30 GAGQEVGRSCCVLKYRGKTIVCDTGVHPAFTGIAALPFIDELDW--STVDAILITHFHLD 87
Query: 366 HLGALPYAVGKLGL---SCPIYATLPVYKMGQMFMYDLYQAHKNVSEFDLFTLDDVDMAF 536
H AL Y + K +Y T P + + M D + ++ +LF +++ ++
Sbjct: 88 HAAALTYIMEKTNFRDGHGKVYMTHPTKAVYRFLMSDFVRISNAGNDDNLFDENEMLASW 147
Query: 537 DRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
+I + ++Q + + G GLR T AGH LG
Sbjct: 148 RQIEAVDFHQDVSIAG---GLRFTSYHAGHVLG 177
>UniRef50_Q6CAZ0 Cluster: Yarrowia lipolytica chromosome C of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome C of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 799
Score = 46.8 bits (106), Expect = 4e-04
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 2/94 (2%)
Frame = +3
Query: 327 SIDAVLISHSDPLHLGALPYAVGKLGL--SCPIYATLPVYKMGQMFMYDLYQAHKNVSEF 500
+++ VL +H++ HLGA A + P Y TLPV MG++ + Y++ +S
Sbjct: 41 TLNLVLFTHANAAHLGAYALACKLYPALAAVPAYGTLPVINMGRIATLEAYRSQGLLSS- 99
Query: 501 DLFTLDDVDMAFDRIVQLKYNQSIEMKGKGLGLR 602
+ T ++++ FD I +KY Q I G+G+R
Sbjct: 100 EHITATEIEIIFDNITSIKYLQPI-----GIGVR 128
>UniRef50_Q7RRQ3 Cluster: Cleavage and polyadenylation specificity
factor, 73 kDa subunit; n=7; Plasmodium|Rep: Cleavage
and polyadenylation specificity factor, 73 kDa subunit -
Plasmodium yoelii yoelii
Length = 942
Score = 46.4 bits (105), Expect = 6e-04
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Frame = +3
Query: 174 SIIKLHCLSGAGEETPPCYVLQIDEFKFLLDCGWDEKFDMVFIKEL--KRHVNSIDAVLI 347
S I + CL GA E C +++ ++ +LDCG F + + ++ ID LI
Sbjct: 2 SNINIVCLGGASEVGRSCVIIESEKTSIMLDCGIHPAFMGIGCLPIYDAYDISKIDVCLI 61
Query: 348 SHSDPLHLGALPYAVGKLGLSCPIYAT 428
+H H GALPY + K ++ T
Sbjct: 62 THFHMDHSGALPYLINKTRFKGRVFMT 88
>UniRef50_A6QXP5 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative
uncharacterized protein - Ajellomyces capsulatus NAm1
Length = 925
Score = 46.4 bits (105), Expect = 6e-04
Identities = 39/155 (25%), Positives = 64/155 (41%), Gaps = 8/155 (5%)
Frame = +3
Query: 195 LSGAGEETPPCYVLQIDEFKFLLDCGWDEKFD----MVFIKELKRHVNSIDAVLISHSDP 362
L G E C+++Q +LD G D + F + ++++D +LISH
Sbjct: 30 LGGGNEVGRSCHIIQYKGKTVMLDAGMHPAKDGFAALPFFDDFD--LSTVDILLISHFHL 87
Query: 363 LHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFD----LFTLDDVDM 530
H +LPY + K ++ T + + + D + S D L+T D
Sbjct: 88 DHSASLPYVLSKTNFRGRVFMTHATKAIYKWLIQDNVRVSNTSSSSDQRTTLYTEQDHLS 147
Query: 531 AFDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
I + +N + + +RITP PAGH LG
Sbjct: 148 TLSHIEAIDFNTTHTIN----NIRITPFPAGHVLG 178
>UniRef50_Q8KET4 Cluster: Metallo-beta-lactamase superfamily
protein; n=9; Bacteria|Rep: Metallo-beta-lactamase
superfamily protein - Chlorobium tepidum
Length = 469
Score = 46.0 bits (104), Expect = 8e-04
Identities = 39/152 (25%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Frame = +3
Query: 216 TPPCYVLQIDEFKFLLDCGW---DEKFDMVFIKELKRHVNSIDAVLISHSDPLHLGALPY 386
T C++L+ + LLDCG + + + + + IDAV++SH H G LP
Sbjct: 13 TGSCHILRAAGYTVLLDCGLVQGSREVEALNREPFPFEPSEIDAVVLSHGHIDHSGRLPL 72
Query: 387 AVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEF----------DLFTLDDVDMAF 536
V + G PIY ++ ++ + D +N + F L+T+DD
Sbjct: 73 LVNR-GFRGPIYTHHGTIELCEILLRDSATLSENDARFMRKHGQRDDEPLYTVDDAQRCV 131
Query: 537 DRIVQLKYNQSIEMKGKGLGLRITPLPAGHSL 632
++ ++Y + E+ G+ +T L AGH L
Sbjct: 132 RQMEGVRYGERREVLP---GIAVTLLDAGHIL 160
>UniRef50_Q73MR4 Cluster: Metallo-beta-lactamase family protein;
n=1; Treponema denticola|Rep: Metallo-beta-lactamase
family protein - Treponema denticola
Length = 470
Score = 46.0 bits (104), Expect = 8e-04
Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Frame = +3
Query: 180 IKLHCLSGAGEETPPCYVLQIDEFKFLLDCG-WDEKFDMVFIKELKRHVNS--IDAVLIS 350
IK + L A E T ++L++D K+L+DCG + K K +V + ++AV+++
Sbjct: 3 IKFYSLGAAEEVTGSKHILEVDGHKYLIDCGAFQGKRAEADKKNRDFNVPAPELEAVILT 62
Query: 351 HSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYD 467
H H G LP +GK G + IYAT + + M D
Sbjct: 63 HGHYDHCGLLP-LLGKHGFTGNIYATPATRDIANLVMMD 100
>UniRef50_Q4N0H3 Cluster: Putative uncharacterized protein; n=2;
Theileria|Rep: Putative uncharacterized protein -
Theileria parva
Length = 678
Score = 46.0 bits (104), Expect = 8e-04
Identities = 23/58 (39%), Positives = 31/58 (53%)
Frame = +3
Query: 303 KELKRHVNSIDAVLISHSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQ 476
K LK NS+D +ISH H+GALP+ +G S PIY T P + + + D Q
Sbjct: 108 KALKNVTNSVDCSVISHFHLDHVGALPFLTEHIGYSGPIYLTYPTRALCPLLLRDSVQ 165
>UniRef50_Q236M0 Cluster: RNA-metabolising metallo-beta-lactamase
family protein; n=1; Tetrahymena thermophila SB210|Rep:
RNA-metabolising metallo-beta-lactamase family protein -
Tetrahymena thermophila SB210
Length = 750
Score = 46.0 bits (104), Expect = 8e-04
Identities = 40/154 (25%), Positives = 70/154 (45%), Gaps = 9/154 (5%)
Frame = +3
Query: 201 GAGEETP-PCYVLQIDEFKFLLDCGW----DEKFDMVFIKELKRHVNSIDAVLISHSDPL 365
GAG+E C +L+ + DCG + + + +K + ID + I+H
Sbjct: 7 GAGQEVGRSCIILEYKGKTIMFDCGLHMGKNGHASLPYFDNIKP--DQIDIIFITHFHLD 64
Query: 366 HLGALPYAVGKL---GLSCPIYATLPVYKMGQMFMYD-LYQAHKNVSEFDLFTLDDVDMA 533
H ALPY + K G +YAT P + + + D L +N+ L+T DD++ +
Sbjct: 65 HCAALPYFIAKTDFDGKKQKVYATSPTRAIYRHVLRDSLTDKSENIK---LYTADDIEKS 121
Query: 534 FDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
+ I + + + +E + ++ PAGH LG
Sbjct: 122 MEVINVIDFYEEMEHE----NIKFKCYPAGHVLG 151
>UniRef50_Q8RBU2 Cluster: Predicted exonuclease of the
beta-lactamase fold involved in RNA processing; n=4;
Clostridia|Rep: Predicted exonuclease of the
beta-lactamase fold involved in RNA processing -
Thermoanaerobacter tengcongensis
Length = 541
Score = 45.6 bits (103), Expect = 0.001
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Frame = +3
Query: 180 IKLHCLSGAGEETPPCYVLQIDEFKFLLDCGW---DEKFDMVFIKELKRHVNSIDAVLIS 350
+K+ L A E T CY+++ + +FL+DCG E D + +E + ID VL++
Sbjct: 1 MKITFLGAAKEVTGSCYLVETENARFLVDCGMFQGGEVEDELNYQEFIFDIKDIDFVLLT 60
Query: 351 HSDPLHLGALPYAVGKLGLSCPIYAT 428
H+ H G +P + K G IYAT
Sbjct: 61 HAHIDHSGRIP-VLYKRGYRKRIYAT 85
>UniRef50_Q23NE4 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 747
Score = 45.6 bits (103), Expect = 0.001
Identities = 30/99 (30%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
Frame = +3
Query: 282 KFDMVFIKELKRHVNSIDAVLISHSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFM 461
KFD+ F+ + + NSID +LI+ D + L LP+ + L +YAT+PV ++GQ +
Sbjct: 112 KFDLTFLNNIDQ--NSIDFILITSIDDIFL--LPFLFQQNKLKAKVYATVPVAQIGQHVL 167
Query: 462 YDLYQAHKNVS-EFDLFTLDDVDMAFDRIVQLKYNQSIE 575
+ Y+ +N + DL + ++ + + + Q Y Q E
Sbjct: 168 QEYYKLVQNRNRNIDLSSSENKNGQYFQNSQNSYFQESE 206
>UniRef50_A0RXV0 Cluster: Cleavage and polyadenylation specificity
factor/metal-dependent RNase; n=1; Cenarchaeum
symbiosum|Rep: Cleavage and polyadenylation specificity
factor/metal-dependent RNase - Cenarchaeum symbiosum
Length = 645
Score = 45.6 bits (103), Expect = 0.001
Identities = 41/161 (25%), Positives = 66/161 (40%), Gaps = 7/161 (4%)
Frame = +3
Query: 174 SIIKLHCLSGAGEETPPCYVLQIDEFKFLLDCGWD-------EKFDMVFIKELKRHVNSI 332
S I L L G G+ C +L + K L+DCG + E + + + ++ +
Sbjct: 186 SEISLTALGGFGQVGRSCMLLSTLDSKVLVDCGVNPGAAHPSESYPRLDWAGIT--LDDL 243
Query: 333 DAVLISHSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFDLFT 512
DAV+I H+ H G LP + K G PIY T P M + D + ++
Sbjct: 244 DAVVIGHAHLDHTGFLP-VLAKYGYRGPIYCTEPTLPMMNLIQLDAIKVATAQGRVPVYA 302
Query: 513 LDDVDMAFDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
DV + + L Y ++ +++ AGH LG
Sbjct: 303 ERDVRQIMRQAITLPYGTVTDISP---DIKLVLANAGHILG 340
>UniRef50_Q1GJ92 Cluster: Beta-lactamase-like protein; n=4;
Rhodobacteraceae|Rep: Beta-lactamase-like protein -
Silicibacter sp. (strain TM1040)
Length = 356
Score = 44.8 bits (101), Expect = 0.002
Identities = 28/78 (35%), Positives = 42/78 (53%)
Frame = +3
Query: 195 LSGAGEETPPCYVLQIDEFKFLLDCGWDEKFDMVFIKELKRHVNSIDAVLISHSDPLHLG 374
LSG G++ P L ++LLDCG+ + + F + + +DAV ++H H+G
Sbjct: 7 LSGIGDKGPAAMRLDTGRHRWLLDCGFGPEANATFDPD---WLIGVDAVFVTHDHIDHIG 63
Query: 375 ALPYAVGKLGLSCPIYAT 428
YAV + GL PIYAT
Sbjct: 64 GAAYAV-EAGL--PIYAT 78
>UniRef50_Q8SRZ4 Cluster: CLEAVAGE AND POLYADENYLATION SPECIFICITY
FACTOR 100kDa SUBUNIT; n=1; Encephalitozoon
cuniculi|Rep: CLEAVAGE AND POLYADENYLATION SPECIFICITY
FACTOR 100kDa SUBUNIT - Encephalitozoon cuniculi
Length = 639
Score = 44.4 bits (100), Expect = 0.002
Identities = 32/137 (23%), Positives = 67/137 (48%)
Frame = +3
Query: 225 CYVLQIDEFKFLLDCGWDEKFDMVFIKELKRHVNSIDAVLISHSDPLHLGALPYAVGKLG 404
C++L+ID K L++CG DM + + S DA+L++ + +G LPY + +
Sbjct: 20 CHMLEIDNTKILVNCGAPYAMDMSMYTPVLPQILSCDAILLTSFNINCIGGLPYVL-RNN 78
Query: 405 LSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFDLFTLDDVDMAFDRIVQLKYNQSIEMKG 584
+++++P+ +G++ + + + S D F+RI ++KY+Q +
Sbjct: 79 YYNKVFSSVPIKVLGKICLDEHLRGMGLESSVD-------TGCFERISEIKYSQPTAVN- 130
Query: 585 KGLGLRITPLPAGHSLG 635
+ I +G+S+G
Sbjct: 131 ---NVEICAYNSGNSIG 144
>UniRef50_Q6BMW3 Cluster: Endoribonuclease YSH1; n=2;
Saccharomycetaceae|Rep: Endoribonuclease YSH1 -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 815
Score = 44.4 bits (100), Expect = 0.002
Identities = 43/175 (24%), Positives = 72/175 (41%), Gaps = 20/175 (11%)
Frame = +3
Query: 171 TSIIKLHCLSGAGEETPPCYVLQIDEFKFLLDCGWDEKFD----MVFIKELKRHVNSIDA 338
T K L G E C++++ +LD G + F E ++ +D
Sbjct: 11 TDDFKFFGLGGCNEVGRSCHIIEYKNKVIMLDAGVHPGLQGLSSLPFYDEYD--LSKVDI 68
Query: 339 VLISHSDPLHLGALPYAVGKLGLSCPIY---ATLPVYKM-------------GQMFMYDL 470
+L+SH H +LPY + + ++ AT +Y+ G +
Sbjct: 69 LLVSHFHLDHAASLPYVMQHTNFNGRVFMTHATKAIYRWLLSDFVKVTSIGGGSDARLNN 128
Query: 471 YQAHKNVSEFDLFTLDDVDMAFDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
+ N +L+T DD+ +FDRI + Y+ +IE+ G+R T AGH LG
Sbjct: 129 SDPNANTGSSNLYTDDDLMRSFDRIETIDYHSTIELD----GIRFTAYHAGHVLG 179
>UniRef50_A5KD85 Cluster: Cleavage and polyadenylation specifity
factor protein, putative; n=2; Plasmodium vivax|Rep:
Cleavage and polyadenylation specifity factor protein,
putative - Plasmodium vivax
Length = 858
Score = 44.0 bits (99), Expect = 0.003
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Frame = +3
Query: 180 IKLHCLSGAGEETPPCYVLQIDEFKFLLDCGWDEKFDMVFIKEL--KRHVNSIDAVLISH 353
I + CL GA E C +++ +LDCG F + + ++ +D LI+H
Sbjct: 4 INIVCLGGASEVGRSCVIIESANRSIMLDCGIHPAFMGIGCLPIYDAYDISKVDLCLITH 63
Query: 354 SDPLHLGALPYAVGKLGLSCPIYAT 428
H GALPY V + +Y T
Sbjct: 64 FHMDHSGALPYLVNRTRFKGKVYMT 88
>UniRef50_Q3ZY44 Cluster: Metallo-beta-lactamase family protein;
n=3; Dehalococcoides|Rep: Metallo-beta-lactamase family
protein - Dehalococcoides sp. (strain CBDB1)
Length = 468
Score = 43.6 bits (98), Expect = 0.004
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Frame = +3
Query: 180 IKLHCLSGAGEETPPCYVLQIDEFKFLLDCGWDEKFDMVFIKELKRHV--NSIDAVLISH 353
IK+ L A T Y+LQ D + L+DCG ++ + V S++AVL+SH
Sbjct: 3 IKIQFLGAAQNVTGSRYLLQTDHTRLLVDCGLYQERHLQNRNWQPFDVPPESLNAVLVSH 62
Query: 354 SDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYD 467
+ H G LP V K G + P+Y T ++ ++ + D
Sbjct: 63 AHIDHCGLLPKLV-KDGYNGPVYLTAATAEIARISLAD 99
>UniRef50_Q2YZG4 Cluster: Predicted exonuclease of the
beta-lactamase fold involved in RNA processing; n=1;
uncultured gamma proteobacterium|Rep: Predicted
exonuclease of the beta-lactamase fold involved in RNA
processing - uncultured gamma proteobacterium
Length = 426
Score = 43.6 bits (98), Expect = 0.004
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 16/119 (13%)
Frame = +3
Query: 327 SIDAVLISHSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFD- 503
++DA+L+SH+ H G +P V K G P+YAT P + Q+ + D AH + D
Sbjct: 14 TVDAMLVSHAHMDHSGNIPNLV-KKGFKGPVYATPPTVDLCQLMLRD--SAHLQKKDIDW 70
Query: 504 ---------------LFTLDDVDMAFDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
L+++DD + + ++Y++S E+ G+++T AGH LG
Sbjct: 71 VNRIRAKHHQPPMEPLYSMDDAEESLHYFQPVEYDKSFEVIP---GVQVTFKEAGHILG 126
>UniRef50_Q7UMQ3 Cluster: Cleavage and polyadenylation specifity
factor-related protein; n=1; Pirellula sp.|Rep: Cleavage
and polyadenylation specifity factor-related protein -
Rhodopirellula baltica
Length = 488
Score = 43.2 bits (97), Expect = 0.005
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 4/160 (2%)
Frame = +3
Query: 168 MTSIIKLHCLSGAGEE-TPPCYVLQIDEFKFLL-DCGWDEKFDMVFIK--ELKRHVNSID 335
+ S++KL GA E T C+ L ID+ + LL DCG + D E++ + I
Sbjct: 41 LMSLMKL-VHHGAHEGVTGSCHQLWIDDSQSLLVDCGTFQGEDARKKPNPEIEFSLRGIQ 99
Query: 336 AVLISHSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFDLFTL 515
A+L++H H G +PY + G PI + P K+ + M D + +
Sbjct: 100 ALLLTHVHIDHAGRIPYLLA-AGFDHPILCSAPTAKLLPLVMEDALKI--GFTRSKRLIK 156
Query: 516 DDVDMAFDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
+ +V L Y+Q + G G+++ LPAGH LG
Sbjct: 157 KFLGQIRKLLVPLPYHQWHDCPG---GVKVRLLPAGHVLG 193
>UniRef50_Q15V20 Cluster: RNA-metabolising metallo-beta-lactamase;
n=1; Pseudoalteromonas atlantica T6c|Rep:
RNA-metabolising metallo-beta-lactamase -
Pseudoalteromonas atlantica (strain T6c / BAA-1087)
Length = 467
Score = 43.2 bits (97), Expect = 0.005
Identities = 31/81 (38%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Frame = +3
Query: 201 GAGEE-TPPCYVLQIDEF-KFLLDCGWDE---KFDMVFIKELKRHVNSIDAVLISHSDPL 365
GA +E T C++++ F K LLDCG + D + + + SIDAVL+SH+
Sbjct: 8 GAAQEVTGSCHLIESASFGKILLDCGMHQGGSSIDRIGDEGFPFNPASIDAVLLSHAHLD 67
Query: 366 HLGALPYAVGKLGLSCPIYAT 428
H G LP V G + PIY T
Sbjct: 68 HSGMLPKLVHD-GFTGPIYCT 87
>UniRef50_Q8TW11 Cluster: Predicted metal-dependent RNase, consists
of a metallo-beta-lactamase domain and an RNA-binding KH
domain; n=1; Methanopyrus kandleri|Rep: Predicted
metal-dependent RNase, consists of a
metallo-beta-lactamase domain and an RNA-binding KH
domain - Methanopyrus kandleri
Length = 652
Score = 43.2 bits (97), Expect = 0.005
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 8/159 (5%)
Frame = +3
Query: 183 KLHCLSGAGEETPPCYVLQIDEFKFLLDCGWD------EKFDMVFIKELKRHVNSIDAVL 344
++ L G E L +E + LLDCG + + + + E + ++ +DA++
Sbjct: 195 RVSALGGFQEVGRSSLFLHTEESRVLLDCGVNVAANGTDAYPHFNVPEFR--MDDLDAIV 252
Query: 345 ISHSDPLHLGALPYAVGK--LGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFDLFTLD 518
I+H+ H G LPY + P+Y T P + + + D + + + +T
Sbjct: 253 ITHAHLDHCGFLPYFYRHKVIESRVPVYCTPPTRDLMYLLLTDYIKVLEKRGQEPPYTEK 312
Query: 519 DVDMAFDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
DV R + + Y + ++ + IT AGH LG
Sbjct: 313 DVKKVIKRTITIDYREPTDITP---DMSITFYNAGHILG 348
>UniRef50_A5KKJ4 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus torques ATCC 27756|Rep: Putative
uncharacterized protein - Ruminococcus torques ATCC
27756
Length = 534
Score = 42.7 bits (96), Expect = 0.007
Identities = 32/108 (29%), Positives = 49/108 (45%)
Frame = +3
Query: 180 IKLHCLSGAGEETPPCYVLQIDEFKFLLDCGWDEKFDMVFIKELKRHVNSIDAVLISHSD 359
+KL + A E T C+ LQ L+DCG ++ D+ L N ID V ++H+
Sbjct: 1 MKLTFVGAAHEVTGSCHFLQAAGKNILIDCGMEQGPDLYENPGLPIPENEIDYVFLTHAH 60
Query: 360 PLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFD 503
H G LP + K G I+ T + + + D AH + EF+
Sbjct: 61 IDHSGMLP-KLAKNGFKGQIFTTFATADLCNIMLRD--SAH--IQEFE 103
>UniRef50_A3I563 Cluster: Zn-dependent hydrolase, beta-lactamase
superfamily protein; n=1; Bacillus sp. B14905|Rep:
Zn-dependent hydrolase, beta-lactamase superfamily
protein - Bacillus sp. B14905
Length = 356
Score = 42.7 bits (96), Expect = 0.007
Identities = 24/69 (34%), Positives = 32/69 (46%)
Frame = +3
Query: 177 IIKLHCLSGAGEETPPCYVLQIDEFKFLLDCGWDEKFDMVFIKELKRHVNSIDAVLISHS 356
+ K+ L G GE C+ ++ LLDCG + HV + AV ISHS
Sbjct: 1 MFKIEILGGVGEYGRNCFYIENQGKAILLDCGVMKNSQKTPPAITLNHVEKLKAVFISHS 60
Query: 357 DPLHLGALP 383
H+GALP
Sbjct: 61 HIDHVGALP 69
>UniRef50_Q9UXE8 Cluster: MRNA 3'-end polyadenylation factor; n=6;
Thermoprotei|Rep: MRNA 3'-end polyadenylation factor -
Sulfolobus solfataricus
Length = 639
Score = 42.7 bits (96), Expect = 0.007
Identities = 40/160 (25%), Positives = 72/160 (45%), Gaps = 8/160 (5%)
Frame = +3
Query: 180 IKLHCLSGAGEETPPCYVLQIDEFKFLLDCG-------WDEK-FDMVFIKELKRHVNSID 335
+++ L G E +++ E K LLD G + EK F + I +LK + +D
Sbjct: 183 VRITALGGFLEVGRSAVLVETPESKVLLDVGLNPSANMFGEKLFPKLDIDQLK--MEELD 240
Query: 336 AVLISHSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFDLFTL 515
AV+I+H+ H G +P+ + K G P+Y T+P + + D + + ++
Sbjct: 241 AVVITHAHLDHCGMVPF-LFKYGYEGPVYTTVPTRDIMALMQLDSLDVAEKEGKPIPYSA 299
Query: 516 DDVDMAFDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
+V + L Y + ++ +R+T AGH LG
Sbjct: 300 KEVRKELLHTITLDYGEVTDI---APDIRLTFYNAGHILG 336
>UniRef50_Q5CPX2 Cluster: Cleavage and polyadenylation specifity
factor protein, CPSF metallobeta-lactamase; n=2;
Cryptosporidium|Rep: Cleavage and polyadenylation
specifity factor protein, CPSF metallobeta-lactamase -
Cryptosporidium parvum Iowa II
Length = 780
Score = 42.3 bits (95), Expect = 0.009
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 14/159 (8%)
Frame = +3
Query: 201 GAGEETP-PCYVLQIDEFKFLLDCGWDEKFDMVFIKEL--KRHVNSIDAVLISHSDPLHL 371
GAG E C V+ + DCG F + + V++ID LI+H H
Sbjct: 30 GAGCEVGRSCVVVSFKGRSVMFDCGIHPAFSGIGSLPVFDAIDVSTIDLCLITHFHLDHS 89
Query: 372 GALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHK-----------NVSEFDLFTLD 518
GA PY V + ++ T P + ++ D + +K +S +L+T
Sbjct: 90 GATPYFVSLTDFNGKVFMTEPTKAICKLVWQDYARVNKFSAGSIESEEAPLSSINLYTEK 149
Query: 519 DVDMAFDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
D++ A + + + Q +E+ G+R + AGH LG
Sbjct: 150 DIEKAINMTEIIDFRQQVELD----GIRFSCYGAGHVLG 184
>UniRef50_Q97AZ6 Cluster: Cleavage and polyadenylation specificity
factor; n=9; Euryarchaeota|Rep: Cleavage and
polyadenylation specificity factor - Thermoplasma
volcanium
Length = 639
Score = 42.3 bits (95), Expect = 0.009
Identities = 38/162 (23%), Positives = 70/162 (43%), Gaps = 10/162 (6%)
Frame = +3
Query: 180 IKLHCLSGAGEETPPCYVLQIDEFKFLLDCG----------WDEKFDMVFIKELKRHVNS 329
++L L G E ++ K L+DCG WD +++ E++ ++S
Sbjct: 180 VRLTALGGHSEVGRSATLVSTKNSKVLIDCGMMNVGPDADPWDAA-PYLYVPEVQP-LSS 237
Query: 330 IDAVLISHSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFDLF 509
IDAV+++H+ H G LP + K G P+Y T P + + D + + +
Sbjct: 238 IDAVILTHAHLDHSGLLP-LLFKYGYDGPVYMTQPTRDLAVLLQDDYIKVARMEGGKVPY 296
Query: 510 TLDDVDMAFDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
+ + L+Y ++ ++ +R+T AGH LG
Sbjct: 297 ESKYIREELKHTITLRYGETTDIT---RDMRLTFYNAGHILG 335
>UniRef50_Q9RZ85 Cluster: Cleavage and polyadenylation specificity
factor-related protein; n=2; Deinococcus|Rep: Cleavage
and polyadenylation specificity factor-related protein -
Deinococcus radiodurans
Length = 499
Score = 41.9 bits (94), Expect = 0.012
Identities = 44/175 (25%), Positives = 79/175 (45%), Gaps = 20/175 (11%)
Frame = +3
Query: 171 TSIIKLHCLSGAGEETPPCYVLQIDEFKFLLDCGWDEKFDMVFIKELKR---HVNSIDAV 341
T +++ A T ++L + L+DCG + D + + + S+DAV
Sbjct: 11 TLAMQMQSFGAACTVTGSMHLLTLGGRHLLVDCGLFQGGDELERRNRESFPFEPASLDAV 70
Query: 342 LISHSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQM------------FMYDLYQAHK 485
L++H+ H+G LP V +LG P+Y T P + + + DL +A +
Sbjct: 71 LLTHAHLDHVGRLPLLV-RLGYRGPVYCTPPTAALAETVLLDSARLQVEGYRQDLRRARR 129
Query: 486 NVSEFD----LFTLDDVDMAFDRI-VQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
E + L+ +DV + QL++ +++ + G +R+TP AGH LG
Sbjct: 130 QGREDEVPPPLYDEEDVHRTLALLRPQLEFGETVTVAG----VRVTPQRAGHILG 180
>UniRef50_Q6MLH4 Cluster: Predicted exonuclease of the
beta-lactamase family; n=2; Proteobacteria|Rep:
Predicted exonuclease of the beta-lactamase family -
Bdellovibrio bacteriovorus
Length = 452
Score = 41.9 bits (94), Expect = 0.012
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Frame = +3
Query: 195 LSGAGEETPPCYVLQIDEFKFLLDCGWDEKFDMVFI---KELKRHVNSIDAVLISHSDPL 365
L AG T +++ ++ + L+DCG + F + ++ I AV+++H+
Sbjct: 6 LGAAGTVTGSKFLVHNNDTRILVDCGMFQGFKELRELNWEDFPFDPRDIQAVVLTHAHLD 65
Query: 366 HLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYD 467
H GALP V K G PIY T P ++ ++ + D
Sbjct: 66 HCGALPLLV-KKGFKGPIYCTEPTLELTKIILLD 98
>UniRef50_A7QCN8 Cluster: Chromosome chr12 scaffold_78, whole genome
shotgun sequence; n=12; Eukaryota|Rep: Chromosome chr12
scaffold_78, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 662
Score = 41.9 bits (94), Expect = 0.012
Identities = 26/104 (25%), Positives = 51/104 (49%)
Frame = +3
Query: 324 NSIDAVLISHSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFD 503
++ID +L++H H +LPY + K ++ T + ++ + D + K E
Sbjct: 42 STIDVLLVTHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYKLLLSDYVKVSKVSVEDM 101
Query: 504 LFTLDDVDMAFDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
L+ D+ + D+I + ++Q++E+ G+R AGH LG
Sbjct: 102 LYDEQDILRSMDKIEVIDFHQTLEVN----GIRFWCYTAGHVLG 141
>UniRef50_Q7QYP3 Cluster: GLP_393_23867_26140; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_393_23867_26140 - Giardia lamblia
ATCC 50803
Length = 757
Score = 41.9 bits (94), Expect = 0.012
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 26/178 (14%)
Frame = +3
Query: 180 IKLHCLSGAGEETPPCYVLQIDEF----KFLLDCGW----DEKFDMVFIK-----ELKRH 320
+KL L E C++L +LDCG E D V I+ +L+ +
Sbjct: 29 VKLTPLGAGNEVGRSCFILSYQRSGCSGSIMLDCGLHPALSETRDYVAIQALPFFDLEDY 88
Query: 321 VNSIDAVLISHSDPLHLGALPYAV----------GK--LGLSCPIYATLPVYKMGQMFMY 464
V+++ +LI+H H+ ALPY + GK L P+Y T P K+ + +
Sbjct: 89 VSTLSLILITHFHNDHIAALPYLLRCLRDRAVKEGKPELHYIPPVYMTAPTLKIFKESVT 148
Query: 465 DLYQAHKNVSEFDLFTLDDVD-MAFDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
D+ +S+ L+T +DV+ MA + + + Q+ + G+ T +PAGH +G
Sbjct: 149 DV------ISQTKLYTHEDVEFMAKNTKLLTSFYQTERVN----GISFTAMPAGHVIG 196
>UniRef50_A7AWH8 Cluster: RNA-metabolising metallo-beta-lactamase
and metallo-beta-lactamase superfamily domain containing
protein; n=1; Babesia bovis|Rep: RNA-metabolising
metallo-beta-lactamase and metallo-beta-lactamase
superfamily domain containing protein - Babesia bovis
Length = 760
Score = 41.9 bits (94), Expect = 0.012
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = +3
Query: 303 KELKRHVNSIDAVLISHSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQ 476
K L ++ID +ISH H+GALP+ LG P++ T P +G + + D Q
Sbjct: 112 KSLNDITSNIDCAIISHFHLDHIGALPFLTEHLGYKGPVFMTYPTRGLGPIMLRDSAQ 169
>UniRef50_Q60355 Cluster: Uncharacterized protein MJ0047; n=6;
Methanococcales|Rep: Uncharacterized protein MJ0047 -
Methanococcus jannaschii
Length = 428
Score = 41.9 bits (94), Expect = 0.012
Identities = 29/113 (25%), Positives = 52/113 (46%)
Frame = +3
Query: 225 CYVLQIDEFKFLLDCGWDEKFDMVFIKELKRHVNSIDAVLISHSDPLHLGALPYAVGKLG 404
C ++ D+ K LLDCG ++ + L + +D V ISH+ H GALP +
Sbjct: 16 CIEIKTDKSKILLDCGVKLGKEIEY-PILDNSIRDVDKVFISHAHLDHSGALPVLFHR-K 73
Query: 405 LSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFDLFTLDDVDMAFDRIVQLKYN 563
+ P+ T K+ ++ + D+ + + ++ + DV A + L YN
Sbjct: 74 MDVPVITTELSKKLIKVLLKDMVKIAETENKKIPYNNHDVKEAIRHTIPLNYN 126
>UniRef50_UPI00004992E1 Cluster: cleavage and polyadenylation
specificity factor subunit, putative; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: cleavage and polyadenylation
specificity factor subunit, putative - Entamoeba
histolytica HM-1:IMSS
Length = 452
Score = 41.5 bits (93), Expect = 0.016
Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 2/154 (1%)
Frame = +3
Query: 180 IKLHCLSGAGEETPPCYVLQIDEFKFLLDCGWDE-KFDM-VFIKELKRHVNSIDAVLISH 353
+K+H G C V++ E L DCG++ + D+ + + + I A+ I+H
Sbjct: 1 MKVHVFGGGKSVGSSCVVVEGKEDAILFDCGYNPVRPDVGIDFSRMNAISSKIRAICITH 60
Query: 354 SDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFDLFTLDDVDMA 533
H+G LP+ + K + PIY + P + + + D++ + +LF D D
Sbjct: 61 FHVDHVGMLPW-LTKF-MDVPIYLSEPTQALLSLIINDIHSGN------NLFCQADFDKC 112
Query: 534 FDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
I+Q K K L I + AGH+LG
Sbjct: 113 ---ILQCKPIDPTMTKRVTQNLSIRCIYAGHALG 143
>UniRef50_Q3AAG6 Cluster: Metallo-beta-lactamase family protein;
n=2; Carboxydothermus hydrogenoformans|Rep:
Metallo-beta-lactamase family protein - Carboxydothermus
hydrogenoformans (strain Z-2901 / DSM 6008)
Length = 504
Score = 41.5 bits (93), Expect = 0.016
Identities = 42/166 (25%), Positives = 69/166 (41%), Gaps = 14/166 (8%)
Frame = +3
Query: 180 IKLHCLSGAGEETPPCYVLQIDEFKFLLDCGWDEKFDMVFIK---ELKRHVNSIDAVLIS 350
++L A T CY+ + KFL+DCG + + + E + I+ +L++
Sbjct: 1 MELTFFGAADTVTGSCYLFNVAGHKFLVDCGLFQGPKAIKERNYGEFPFNPREIEFILLT 60
Query: 351 HSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYD--------LYQAHKNVSEFDL 506
H+ H G +P V K G IYAT P + + + D + + ++ +
Sbjct: 61 HAHIDHSGLIPKLV-KKGFKGTIYATEPTVDLAAVMLPDSGHVQEMEVERKNRKLRRAGK 119
Query: 507 FTLDDVDMAFDRIVQLKYNQSIEMKGKGL---GLRITPLPAGHSLG 635
L + A D L Y Q I ++ GL +T AGH LG
Sbjct: 120 PELQPIYTADDAFNALAYFQKIPLETPITPLPGLEVTFFDAGHILG 165
>UniRef50_A3WMD7 Cluster: Predicted exonuclease of the
beta-lactamase fold; n=1; Idiomarina baltica OS145|Rep:
Predicted exonuclease of the beta-lactamase fold -
Idiomarina baltica OS145
Length = 460
Score = 41.5 bits (93), Expect = 0.016
Identities = 40/153 (26%), Positives = 69/153 (45%), Gaps = 1/153 (0%)
Frame = +3
Query: 180 IKLHCLSGAGEETPPCYVLQID-EFKFLLDCGWDEKFDMVFIKELKRHVNSIDAVLISHS 356
I L L G + T C++ ++ + ++DCG + V+S+ AV I+H+
Sbjct: 10 IHLTHLGGTWQVTGSCHLWHLNAQQTVMIDCGAFQGITQEDDLTPYVDVDSLAAVFITHA 69
Query: 357 DPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFDLFTLDDVDMAF 536
H+G LP + LG PIY T + Q+ + D Q + + T + +A
Sbjct: 70 HLDHVGRLPQLLA-LGYRGPIYCTAATLALMQLVLGDSLQL-AGIRDESALTAFNTLLA- 126
Query: 537 DRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
+V +Y Q++++ L +T AGH LG
Sbjct: 127 RHVVLCEYGQTVDVLP---SLSVTFEEAGHILG 156
>UniRef50_Q0HMU8 Cluster: RNA-metabolizing metallo-beta-lactamase;
n=16; Shewanella|Rep: RNA-metabolizing
metallo-beta-lactamase - Shewanella sp. (strain MR-4)
Length = 480
Score = 41.1 bits (92), Expect = 0.022
Identities = 51/163 (31%), Positives = 73/163 (44%), Gaps = 18/163 (11%)
Frame = +3
Query: 201 GAGEE-TPPCYVLQIDEFKFLLDCGWDE--KFDMVFIKE-LKRHVNSIDAVLISHSDPLH 368
GA EE T C++L I + LLDCG + K D + E +I AV++SH+ H
Sbjct: 9 GATEEVTGSCHLLTIAGQQMLLDCGLIQGGKADELRNHERFSFDPQAISAVVLSHAHIDH 68
Query: 369 LGALPYAVGKLGLSCPIY-----ATLPVYKMGQMFMYDLYQAHKN-----VSEFD----L 506
G LP V K G + PIY A L + M + +N E + L
Sbjct: 69 SGRLPLLV-KAGYTGPIYTHKATAELCAIMLKDAAMLQVRDTERNNKKRAKHELEPLEPL 127
Query: 507 FTLDDVDMAFDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
FT++D + A + V L+Y Q ++ + I AGH LG
Sbjct: 128 FTVEDAEQAVTQFVALEYGQVTQVIPH---VDICLSDAGHILG 167
>UniRef50_Q0EST3 Cluster: Beta-lactamase-like; n=2;
Thermoanaerobacter ethanolicus|Rep: Beta-lactamase-like
- Thermoanaerobacter ethanolicus X514
Length = 616
Score = 41.1 bits (92), Expect = 0.022
Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 4/140 (2%)
Frame = +3
Query: 228 YVLQIDEFKFLLDCGWDEKFDMVF---IKELKRHVNSIDAVLISHSDPLHLGALPYAVGK 398
Y++ + LLD G K ++ IK L + ID V+I+H H G + + K
Sbjct: 218 YLVSYEGINILLDAGALIKDKTLYYNSIKNLPIDIKDIDLVIITHVHLDHSGGIVELLRK 277
Query: 399 LGLSCPIYATLPVYK-MGQMFMYDLYQAHKNVSEFDLFTLDDVDMAFDRIVQLKYNQSIE 575
GL+ PI + P + + Q+F+ + + E ++ D ++FD + S
Sbjct: 278 -GLNSPIIISRPTKEILKQIFLRGHTKLEVKIEE-EIINFDSQIISFD----TEEESSFR 331
Query: 576 MKGKGLGLRITPLPAGHSLG 635
+K K + L++ PAGH LG
Sbjct: 332 IKNKEVKLKL--FPAGHILG 349
>UniRef50_Q023M0 Cluster: Beta-lactamase domain protein; n=1;
Solibacter usitatus Ellin6076|Rep: Beta-lactamase domain
protein - Solibacter usitatus (strain Ellin6076)
Length = 469
Score = 41.1 bits (92), Expect = 0.022
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Frame = +3
Query: 180 IKLHCLSGAGEETPPCYVLQIDEFKFLLDCGWDE---KFDMVFIKELKRHVNSIDAVLIS 350
+KL AG T ++++ ++LLDCG + K + L +SIDAV++S
Sbjct: 1 MKLTFWGAAGTVTGSMHLVETGGKRYLLDCGLAQGRRKEADAKNRNLPFSGSSIDAVVLS 60
Query: 351 HSDPLHLGALPYAVGKLGLSCPIYAT 428
H+ H G LP V K G S PIY+T
Sbjct: 61 HAHIDHSGNLPSLV-KHGFSGPIYST 85
>UniRef50_A7HPZ1 Cluster: Beta-lactamase domain protein; n=2;
Alphaproteobacteria|Rep: Beta-lactamase domain protein -
Parvibaculum lavamentivorans DS-1
Length = 472
Score = 41.1 bits (92), Expect = 0.022
Identities = 43/168 (25%), Positives = 76/168 (45%), Gaps = 18/168 (10%)
Frame = +3
Query: 186 LHCLSGAGEETPPCYVLQIDEFKFLLDCGWDEKFDMVFIKELK-----RHVNSIDAVLIS 350
L L GAG T ++L +D + L+DCG + + ++EL SIDA++++
Sbjct: 24 LTSLGGAGTVTGSKHLLTLDGHRILIDCGLFQ--GLKNLRELNWAPFPVDPRSIDAIVLT 81
Query: 351 HSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDL---------YQAHKNVSE-- 497
H+ H G LP V + G ++AT + + + D Y K+ S+
Sbjct: 82 HAHLDHSGYLPKIV-REGFRGRVFATDTTCNVAALILKDSGYIQEKDADYANRKSYSKHK 140
Query: 498 --FDLFTLDDVDMAFDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
L+ + D + A + + Y++++ + G G +T AGH LG
Sbjct: 141 PALPLYGVRDAERAVEAFTAVPYHKTVSLPG---GATLTFRHAGHILG 185
>UniRef50_A6FNJ5 Cluster: Beta-lactamase-like protein; n=1;
Roseobacter sp. AzwK-3b|Rep: Beta-lactamase-like protein
- Roseobacter sp. AzwK-3b
Length = 245
Score = 41.1 bits (92), Expect = 0.022
Identities = 20/62 (32%), Positives = 33/62 (53%)
Frame = +3
Query: 201 GAGEETPPCYVLQIDEFKFLLDCGWDEKFDMVFIKELKRHVNSIDAVLISHSDPLHLGAL 380
G+G C+ + +E +FL+DCG M+ +K ++ +ID + I+H H G L
Sbjct: 13 GSGGRFNTCFHVATEETRFLIDCGASS---MIALKAMQIDRAAIDTIFITHFHGDHFGGL 69
Query: 381 PY 386
PY
Sbjct: 70 PY 71
>UniRef50_A0JWK6 Cluster: Beta-lactamase domain protein; n=2;
Bacteria|Rep: Beta-lactamase domain protein -
Arthrobacter sp. (strain FB24)
Length = 461
Score = 41.1 bits (92), Expect = 0.022
Identities = 39/167 (23%), Positives = 76/167 (45%), Gaps = 16/167 (9%)
Frame = +3
Query: 183 KLHCLSGAGEETPPCYVLQIDEFKFLLDCGWDEKFDMVFIKE---LKRHVNSIDAVLISH 353
+L L T Y+++ + L+DCG + + ++ + +SIDA+L++H
Sbjct: 8 QLRFLGATDSVTGSRYLVEAAGKRILVDCGLFQGYKVLRDRNRIPFPVRPDSIDAILLTH 67
Query: 354 SDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEF----------- 500
+ H G +P A+ + G + P+YAT ++ + + D + +++
Sbjct: 68 AHLDHTGYVP-ALVRDGFNGPVYATEGTTELCTLLLPDSGHLQEEEAKYAYEHGSSRHSP 126
Query: 501 --DLFTLDDVDMAFDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
L+T D + D + ++ +E+ G G+ T LPAGH LG
Sbjct: 127 PVPLYTAADAVRSLDSFREHGFDTPLELGG---GIAATFLPAGHILG 170
>UniRef50_Q2RJ88 Cluster: RNA-metabolising metallo-beta-lactamase;
n=5; Bacteria|Rep: RNA-metabolising
metallo-beta-lactamase - Moorella thermoacetica (strain
ATCC 39073)
Length = 536
Score = 40.7 bits (91), Expect = 0.029
Identities = 25/100 (25%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Frame = +3
Query: 177 IIKLHCLSGAGEETPPCYVLQIDEFKFLLDCGWDEKFDMVFIKE---LKRHVNSIDAVLI 347
+IKL AG T CY+L ++ L+DCG + + + + +IDA+++
Sbjct: 1 MIKLQFCGAAGTVTGSCYLLDTGRYRLLIDCGLFQGSKAIKERNYGPFPFNPGAIDALIL 60
Query: 348 SHSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYD 467
+H+ H G +P + G PI+ T ++ ++ + D
Sbjct: 61 THAHIDHCGLIP-KLYLQGFKGPIFTTPVTAELARVLLPD 99
>UniRef50_A5URN4 Cluster: Beta-lactamase domain protein; n=5;
Chloroflexi (class)|Rep: Beta-lactamase domain protein -
Roseiflexus sp. RS-1
Length = 561
Score = 40.7 bits (91), Expect = 0.029
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 8/86 (9%)
Frame = +3
Query: 195 LSGAGEETPPCYVLQIDEFKFLLDCG--WDEK----FDMVF--IKELKRHVNSIDAVLIS 350
L GAGE +VL+ ++ +LDCG + E D+V I L+ + I A++++
Sbjct: 11 LGGAGEVGRNMWVLEQNDEILVLDCGVMFPEADMLGVDLVLPDITYLRDQKDKIKAIVLT 70
Query: 351 HSDPLHLGALPYAVGKLGLSCPIYAT 428
H H+GA+PY V +L PIY T
Sbjct: 71 HGHEDHIGAVPYLVPELDFP-PIYGT 95
>UniRef50_Q4AMZ9 Cluster: Beta-lactamase-like:RNA-metabolising
metallo-beta-lactamase; n=2; Chlorobium|Rep:
Beta-lactamase-like:RNA-metabolising
metallo-beta-lactamase - Chlorobium phaeobacteroides BS1
Length = 462
Score = 40.3 bits (90), Expect = 0.038
Identities = 41/157 (26%), Positives = 68/157 (43%), Gaps = 17/157 (10%)
Frame = +3
Query: 216 TPPCYVLQIDEFKFLLDCG---WDEKFDMVFIKELKRHVNSIDAVLISHSDPLHLGALPY 386
T C++L+ID + LLDCG E+ + + + IDAV++SH H G +P
Sbjct: 13 TGSCHILRIDGRRILLDCGLVQGREEEEALNREPFPFDPREIDAVVLSHGHIDHSGRVPL 72
Query: 387 AVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFD--------------LFTLDDV 524
V K G P+Y + + + D + ++ ++ L+T++DV
Sbjct: 73 LV-KKGFDGPVYTHPATRDLALVLLQDSARLNERDVRYENRLRERKNMPLIEPLYTVEDV 131
Query: 525 DMAFDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
+ + LKY E+ G+ I AGH LG
Sbjct: 132 VRTVNLMQGLKYGVKKEILP---GVTIRFQDAGHILG 165
>UniRef50_A5N0B8 Cluster: Putative uncharacterized protein; n=1;
Clostridium kluyveri DSM 555|Rep: Putative
uncharacterized protein - Clostridium kluyveri DSM 555
Length = 280
Score = 40.3 bits (90), Expect = 0.038
Identities = 38/128 (29%), Positives = 64/128 (50%), Gaps = 2/128 (1%)
Frame = +3
Query: 258 LLDCGWDEKFDMVF--IKELKRHVNSIDAVLISHSDPLHLGALPYAVGKLGLSCPIYATL 431
L+D G + ++ +F IKE R ++ I+ V++SHS P H+G+ K C + A
Sbjct: 40 LIDTGVKDSYEKIFSYIKEQGRSIDEINLVILSHSHPDHIGSANKI--KTITGCKVMA-- 95
Query: 432 PVYKMGQMFMYDLYQAHKNVSEFDLFTLDDVDMAFDRIVQLKYNQSIEMKGKGLGLRITP 611
+K Q ++ DL +K+ + L + + D +V K Q I++ + L L+I
Sbjct: 96 --HKGEQEWIEDLSVQYKSRMVPGFYELVNKSVKVDELV--KDKQEIKL-DEDLTLQIIH 150
Query: 612 LPAGHSLG 635
P GHS G
Sbjct: 151 SP-GHSKG 157
>UniRef50_Q11BH9 Cluster: Beta-lactamase-like; n=6;
Proteobacteria|Rep: Beta-lactamase-like - Mesorhizobium
sp. (strain BNC1)
Length = 452
Score = 39.9 bits (89), Expect = 0.050
Identities = 44/171 (25%), Positives = 79/171 (46%), Gaps = 18/171 (10%)
Frame = +3
Query: 177 IIKLHCLSGAGEETPPCYVLQIDEFKFLLDCGWDEKFDMVFIKELKRHV-----NSIDAV 341
++ L L GAG T ++L + + L+DCG + + ++EL +SIDAV
Sbjct: 1 MLTLTSLGGAGTVTGSKHLLTNGDRRILIDCGLFQ--GLKNLRELNWEPLPVAPSSIDAV 58
Query: 342 LISHSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDL---------YQAHKNVS 494
+++H+ H G LP V + G IYAT + ++ + D Y K S
Sbjct: 59 VLTHAHLDHSGYLPKLV-RDGFKGRIYATAATRDVAELILKDSGFLNEKDAEYANRKGFS 117
Query: 495 E----FDLFTLDDVDMAFDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
+ L+ + D + A + + +++++++ G G +T AGH LG
Sbjct: 118 KHKPALPLYGVRDAERAMEFFSIVPFDKAVQLPG---GATLTFRHAGHILG 165
>UniRef50_Q011B3 Cluster: Putative metallo beta subunit lactamase;
n=1; Ostreococcus tauri|Rep: Putative metallo beta
subunit lactamase - Ostreococcus tauri
Length = 404
Score = 39.9 bits (89), Expect = 0.050
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Frame = +3
Query: 309 LKRHVNSIDAVLISHSDPLHLGALPYAVGKLGLSCPIYATLPVYKM--GQMFMYDLYQAH 482
L R + I+AVLI+H H+GALP+ + L + PIYA L ++ +M Y L+
Sbjct: 44 LHRWRDKIEAVLITHGHEDHIGALPWVIPALDPATPIYAGLFTMQLIKRRMLEYSLW--- 100
Query: 483 KNVSEFDLFTLDD 521
N F +F +++
Sbjct: 101 -NDDRFKVFNMNE 112
>UniRef50_Q5WCW7 Cluster: Beta-lactamase superfamily Zn-dependent
hydrolase; n=1; Bacillus clausii KSM-K16|Rep:
Beta-lactamase superfamily Zn-dependent hydrolase -
Bacillus clausii (strain KSM-K16)
Length = 367
Score = 39.5 bits (88), Expect = 0.066
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +3
Query: 177 IIKLHCLSGAGEETPPCYVLQIDEFK--FLLDCGWDEKFDMVFIKELKRHVNSIDAVLIS 350
++K+ L G GE C++L+ + LLDCG F ++ ++ID V +S
Sbjct: 1 MVKVTALGGVGEYGRNCFLLKEEATNQTILLDCGVKNGKPEQFPAITEQLASTIDVVFLS 60
Query: 351 HSDPLHLGALPYAVGK 398
H H+GALP K
Sbjct: 61 HVHNDHVGALPLLAAK 76
>UniRef50_Q3LWF4 Cluster: Ysh1 3' mRNA end processing factor; n=1;
Bigelowiella natans|Rep: Ysh1 3' mRNA end processing
factor - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 544
Score = 39.5 bits (88), Expect = 0.066
Identities = 42/167 (25%), Positives = 71/167 (42%), Gaps = 13/167 (7%)
Frame = +3
Query: 174 SIIKLHCLSGAGEETPPCYVLQIDEFKFLLDCG-------WDEKFDMVFIKELKRHVNSI 332
SI+K+ L G + C + I F+LD G W + F+K++ + +N
Sbjct: 5 SIVKILQLGGTFQIGNSCIYVMIKNTIFILDIGIIRSDKYWMHLESINFLKKITKPLN-- 62
Query: 333 DAVLISHSDPLHLGALP----YAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEF 500
LISH H+G+LP Y K+ + Y +F Y+ + +
Sbjct: 63 --FLISHYHLDHIGSLPLILNYGSDKVFFLLK-NLSYSTYLTKLLFFYNSKEFLNFTDKL 119
Query: 501 DL--FTLDDVDMAFDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
+ F DD++M + I+ +K N ++G + T +GHSLG
Sbjct: 120 KIKSFNQDDIEMVMELIISVKENTVKMLRGNNIA---TFFNSGHSLG 163
>UniRef50_Q92EY9 Cluster: Lin0319 protein; n=39; Bacilli|Rep:
Lin0319 protein - Listeria innocua
Length = 276
Score = 39.1 bits (87), Expect = 0.088
Identities = 26/95 (27%), Positives = 45/95 (47%)
Frame = +3
Query: 231 VLQIDEFKFLLDCGWDEKFDMVFIKELKRHVNSIDAVLISHSDPLHLGALPYAVGKLGLS 410
+++ + K L+DCG K ++ R +N +DA+LI+H H+ L K L
Sbjct: 30 LVETGDQKILIDCGLSGKKMEGLFAQVGRDMNDLDAILITHEHSDHIKGLGVLARKYKL- 88
Query: 411 CPIYATLPVYKMGQMFMYDLYQAHKNVSEFDLFTL 515
PIYA +K + ++ K +FD+ T+
Sbjct: 89 -PIYANAKTWKAMDNMIGEVSSEQK--FQFDMETV 120
>UniRef50_Q2NK28 Cluster: Zn-dependent hydrolase; n=2; Candidatus
Phytoplasma asteris|Rep: Zn-dependent hydrolase - Aster
yellows witches'-broom phytoplasma (strain AYWB)
Length = 574
Score = 39.1 bits (87), Expect = 0.088
Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 10/132 (7%)
Frame = +3
Query: 180 IKLHCLSGAGEETPPCYVLQIDEFKFLLDCGWDEKFDMVF--------IKELKRHVNSID 335
IK L G GE YVLQI++ FLLD G ++ +L+ + I
Sbjct: 16 IKFFALGGLGESGKNFYVLQINDSYFLLDAGLKYPNTNLYGIDSMIADYYKLQDIKDKIK 75
Query: 336 AVLISHSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHK-NVSEFDL-F 509
V +S + +LGALPY + + P+YA+ + M + + +Q+HK N F+L
Sbjct: 76 GVFLSSAFETNLGALPYLMKDFDI--PVYAS--YFTMQVLKAH--FQSHKINYRNFNLQI 129
Query: 510 TLDDVDMAFDRI 545
D + FD +
Sbjct: 130 VKSDERLIFDDV 141
>UniRef50_O87142 Cluster: WbfZ protein; n=32; Vibrionaceae|Rep: WbfZ
protein - Vibrio cholerae
Length = 446
Score = 39.1 bits (87), Expect = 0.088
Identities = 23/89 (25%), Positives = 44/89 (49%)
Frame = +3
Query: 201 GAGEETPPCYVLQIDEFKFLLDCGWDEKFDMVFIKELKRHVNSIDAVLISHSDPLHLGAL 380
G T C+ L+ D L+DCG + D + ++ + +DA++++H+ H+G L
Sbjct: 16 GKASVTGSCHELRADGQALLIDCGLFQGADERPLA-VEFALGHVDALILTHAHIDHIGRL 74
Query: 381 PYAVGKLGLSCPIYATLPVYKMGQMFMYD 467
P+ + G PIY T ++ + + D
Sbjct: 75 PWLLA-AGFKQPIYCTAATAELVPLMLED 102
>UniRef50_A7CRQ7 Cluster: Beta-lactamase domain protein; n=1;
Opitutaceae bacterium TAV2|Rep: Beta-lactamase domain
protein - Opitutaceae bacterium TAV2
Length = 452
Score = 39.1 bits (87), Expect = 0.088
Identities = 36/159 (22%), Positives = 67/159 (42%), Gaps = 7/159 (4%)
Frame = +3
Query: 180 IKLHCLSGAGEETPPCYVLQIDEFKFLLDCGWDEKF-DMVFIKELKRHVN-SIDAVLISH 353
+KL L+ G C +LQI + ++D G K + + + N ID +L++H
Sbjct: 1 MKLTDLNRQGGIGANCTLLQIGDINLVIDSGLHPKIAGRQAVPDFAKLRNLEIDLILVTH 60
Query: 354 SDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMF-----MYDLYQAHKNVSEFDLFTLD 518
H+G+LP + + + +T + +M + + N+ E+ LFT +
Sbjct: 61 CHLDHIGSLPVLMREHPRPPVMMSTASQMLVERMLHNSANVMKRQKEEDNIPEYPLFTHE 120
Query: 519 DVDMAFDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
D+D R + + + + + IT AGH G
Sbjct: 121 DIDRLAPRFTGIPFGHPKKFRPHKDEIEITLHHAGHVAG 159
>UniRef50_A0UZ06 Cluster: Beta-lactamase-like; n=1; Clostridium
cellulolyticum H10|Rep: Beta-lactamase-like -
Clostridium cellulolyticum H10
Length = 396
Score = 39.1 bits (87), Expect = 0.088
Identities = 22/69 (31%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Frame = +3
Query: 228 YVLQIDEFKFLLDCGWDEKFDMVFIKELKRHV--NSIDAVLISHSDPLHLGALPYAVGKL 401
Y+++ D+ L+D WD + F+++L + + ++IDA++I+H +P H G+L + K+
Sbjct: 37 YIIR-DKKTVLIDTVWDP-YKEQFVEDLDKSIGLSNIDAIVINHMEPDHGGSLGLLMSKI 94
Query: 402 GLSCPIYAT 428
+ PIY T
Sbjct: 95 P-NTPIYCT 102
>UniRef50_Q8IB25 Cluster: Putative uncharacterized protein
MAL8P1.64; n=3; Plasmodium|Rep: Putative uncharacterized
protein MAL8P1.64 - Plasmodium falciparum (isolate 3D7)
Length = 1313
Score = 39.1 bits (87), Expect = 0.088
Identities = 16/42 (38%), Positives = 28/42 (66%)
Frame = +3
Query: 258 LLDCGWDEKFDMVFIKELKRHVNSIDAVLISHSDPLHLGALP 383
L++CGWD+KF + IK + R ID ++I++ ++G+LP
Sbjct: 93 LMNCGWDDKFCLEDIKNVIRVCEVIDLIIITNHSLNYIGSLP 134
>UniRef50_A6E886 Cluster: Metallo-beta-lactamase superfamily
protein; n=1; Pedobacter sp. BAL39|Rep:
Metallo-beta-lactamase superfamily protein - Pedobacter
sp. BAL39
Length = 460
Score = 38.7 bits (86), Expect = 0.12
Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Frame = +3
Query: 180 IKLHCLSGAGEETPPCYVLQIDEFKFLLDCGWDEKFDMVFIKELKRHV----NSIDAVLI 347
+KL A + T ++LQ+ ++ L+DCG D ++ +E ++ +D V++
Sbjct: 1 MKLTIWGAARQVTGSMHLLQLKDYNILIDCGLD--YEKETYQEENQYFPFDPADLDVVIL 58
Query: 348 SHSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYD 467
+H+ H G LP V ++G I T P + ++ + D
Sbjct: 59 THAHIDHSGNLPTLV-RMGFQGQILCTPPTADLSELLLLD 97
>UniRef50_Q5ZWR4 Cluster: Metallo-beta lactamase family; n=4;
Legionella pneumophila|Rep: Metallo-beta lactamase
family - Legionella pneumophila subsp. pneumophila
(strain Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 453
Score = 38.3 bits (85), Expect = 0.15
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Frame = +3
Query: 180 IKLHCLSGAGEETPPCYVLQIDEFKFLLDCGWDEKFDMVFIKE---LKRHVNSIDAVLIS 350
+KL L T Y+L I K L+DCG + + + ++ L + IDAV+I+
Sbjct: 1 MKLTFLGATETVTGSKYLLTIGSKKILIDCGLFQGYKELRLRNWAPLPIDPHDIDAVIIT 60
Query: 351 HSDPLHLGALPYAVGKLGLSCPIYAT 428
H+ H G LP V K G IY T
Sbjct: 61 HAHIDHSGYLPLLV-KNGFQGKIYTT 85
>UniRef50_Q50EJ8 Cluster: Metallo-beta-lactamase superfamily
hydrolase; n=45; Lactobacillales|Rep:
Metallo-beta-lactamase superfamily hydrolase -
Lactobacillus reuteri
Length = 593
Score = 38.3 bits (85), Expect = 0.15
Identities = 33/132 (25%), Positives = 62/132 (46%), Gaps = 8/132 (6%)
Frame = +3
Query: 168 MTSIIKLHCLSGAGEETPPCYVLQIDEFKFLLDCG--WDEK----FDMVFI--KELKRHV 323
M + IK+ G E Y ++I++ F+LD G + E D+V + L+ H
Sbjct: 1 MDNNIKIIPFGGVRENGKNMYAVEIEDQIFILDTGLKYPENELMGIDVVIPDWEYLREHK 60
Query: 324 NSIDAVLISHSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFD 503
+ I V ++H +GALPY + + + P++ + + ++ + + HK V +F+
Sbjct: 61 DKIVGVFLTHGHADSIGALPYFL--MDFNVPVFGSEMTIALAKLAV----KNHKEVKKFN 114
Query: 504 LFTLDDVDMAFD 539
F + D A D
Sbjct: 115 DFHVVDASTAID 126
>UniRef50_A3D3L5 Cluster: Putative uncharacterized protein; n=1;
Shewanella baltica OS155|Rep: Putative uncharacterized
protein - Shewanella baltica OS155
Length = 338
Score = 38.3 bits (85), Expect = 0.15
Identities = 17/49 (34%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +3
Query: 240 IDEFKFLLDCGWDEKFDMVFIKELKRHVNSIDAVLISHSDPLHL-GALP 383
+ KFL+DCG F + + + +K+ +NS + ++++HSD H+ GA P
Sbjct: 22 VSGIKFLVDCG----FKLTYQQHIKKKINSANFIILTHSDEDHINGAFP 66
>UniRef50_Q6MTU5 Cluster: CONSERVED HYPOTEHTICAL PROTEIN; n=3;
Mollicutes|Rep: CONSERVED HYPOTEHTICAL PROTEIN -
Mycoplasma mycoides subsp. mycoides SC
Length = 583
Score = 37.9 bits (84), Expect = 0.20
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Frame = +3
Query: 180 IKLHCLSGAGEETPPCYVLQIDEFKFLLDCG--WDEK----FDMVFIK--ELKRHVNSID 335
IK L G E YVL+ID F+LD G + EK D V K +K++ I
Sbjct: 4 IKFTALGGQDERGKNLYVLEIDNDFFILDAGVKYPEKDILGIDTVIPKFDYIKQNKKKIK 63
Query: 336 AVLISHSDPLHLGALPYAVGKLGLSCPIY 422
+ +++ ++GA+PY + + + PIY
Sbjct: 64 GIFLTNPSAYNMGAVPYLLKE--IKAPIY 90
>UniRef50_Q6ME06 Cluster: Putative uncharacterized protein; n=1;
Candidatus Protochlamydia amoebophila UWE25|Rep:
Putative uncharacterized protein - Protochlamydia
amoebophila (strain UWE25)
Length = 259
Score = 37.5 bits (83), Expect = 0.27
Identities = 30/112 (26%), Positives = 50/112 (44%)
Frame = +3
Query: 177 IIKLHCLSGAGEETPPCYVLQIDEFKFLLDCGWDEKFDMVFIKELKRHVNSIDAVLISHS 356
I+K C +G + C L + K L+D G K + E+ ++ IDA+LI+H
Sbjct: 2 IMKGFCPLASGSKGN-CIYLGTSQTKVLIDAGISAKAIQNRLAEINVDISDIDAILITHE 60
Query: 357 DPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFDLFT 512
H+ L KLG+ P+ A K + +A +N +F +F+
Sbjct: 61 HSDHIQGLKVLAYKLGI--PVLANHETAK-------GIVEAFRNCPKFKIFS 103
>UniRef50_A6TSN2 Cluster: Beta-lactamase domain protein; n=1;
Alkaliphilus metalliredigens QYMF|Rep: Beta-lactamase
domain protein - Alkaliphilus metalliredigens QYMF
Length = 245
Score = 37.5 bits (83), Expect = 0.27
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Frame = +3
Query: 228 YVLQIDEFKFLLDCGWDEKFDMVFIKELKRHVNSIDAVLISHSDPLHLG---ALPYAVGK 398
Y+L+ E K L+DCG + F + +N +DA+ ISH P H+ + YA+G
Sbjct: 22 YLLEDKEIKILVDCG-NGVLSRFF--QHCHDINELDAIFISHLHPDHMSDLMVMKYAIGI 78
Query: 399 LGLSCPIYATLPVY 440
+ + ++P+Y
Sbjct: 79 GQMQGKVKQSIPIY 92
>UniRef50_O31760 Cluster: UPF0036 protein ymfA; n=77;
Firmicutes|Rep: UPF0036 protein ymfA - Bacillus subtilis
Length = 555
Score = 37.5 bits (83), Expect = 0.27
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 8/96 (8%)
Frame = +3
Query: 165 KMTSIIKLHCLSGAGEETPPCYVLQIDEFKFLLDCGWDEK------FDMVF--IKELKRH 320
K T +++ L G GE YV++ID F++D G D+V I L
Sbjct: 4 KNTENVRIIALGGVGEIGKNLYVIEIDSDIFVVDAGLMHPENEMLGIDVVIPDISYLIER 63
Query: 321 VNSIDAVLISHSDPLHLGALPYAVGKLGLSCPIYAT 428
+ + A+ ++H ++G + Y + K LS P+Y T
Sbjct: 64 ADRVKAIFLTHGHDENIGGVFYLLNK--LSVPVYGT 97
>UniRef50_A0YHA6 Cluster: DNA internalization-related competence
protein ComEC/Rec2; n=1; marine gamma proteobacterium
HTCC2143|Rep: DNA internalization-related competence
protein ComEC/Rec2 - marine gamma proteobacterium
HTCC2143
Length = 790
Score = 37.1 bits (82), Expect = 0.35
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 6/57 (10%)
Frame = +3
Query: 231 VLQIDEFKFLLDCG--WDEKFDM---VFIKELKRH-VNSIDAVLISHSDPLHLGALP 383
V+Q + + D G W + FDM V I L+ H ++ ID+++ISH D H G+LP
Sbjct: 530 VVQTRNYTLVYDVGARWGDDFDMAQAVLIPYLQDHGISHIDSLVISHGDNDHAGSLP 586
>UniRef50_Q8DE34 Cluster: Predicted exonuclease of the
beta-lactamase fold involved in RNA processing; n=6;
Vibrionales|Rep: Predicted exonuclease of the
beta-lactamase fold involved in RNA processing - Vibrio
vulnificus
Length = 446
Score = 36.7 bits (81), Expect = 0.47
Identities = 28/126 (22%), Positives = 57/126 (45%)
Frame = +3
Query: 201 GAGEETPPCYVLQIDEFKFLLDCGWDEKFDMVFIKELKRHVNSIDAVLISHSDPLHLGAL 380
G T C+ + L+DCG + D E+ V IDA++++H+ H+G +
Sbjct: 8 GKDTVTGSCHEFRAAGIALLIDCGLFQGKD-ARPPEVDFPVKHIDALVLTHAHIDHIGRI 66
Query: 381 PYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFDLFTLDDVDMAFDRIVQLKY 560
P+ + G S IY T ++ + + D + ++ L + +D+ R+ +KY
Sbjct: 67 PWLLA-AGFSGSIYCTEATAELVPLMLEDGLRLQLGLNHKQLHQV--LDLVKKRLKPVKY 123
Query: 561 NQSIEM 578
+ + +
Sbjct: 124 GEWLRL 129
>UniRef50_Q72GW5 Cluster: Cleavage and polyadenylation specificity
factor, 100 kDa subunit; n=2; Thermus thermophilus|Rep:
Cleavage and polyadenylation specificity factor, 100 kDa
subunit - Thermus thermophilus (strain HB27 / ATCC
BAA-163 / DSM 7039)
Length = 431
Score = 36.7 bits (81), Expect = 0.47
Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 1/126 (0%)
Frame = +3
Query: 204 AGEETPPCYVLQIDEFKFLLDCG-WDEKFDMVFIKELKRHVNSIDAVLISHSDPLHLGAL 380
A E T ++L + LLDCG + K + +DAVL++H+ H+G L
Sbjct: 9 AREVTGSAHLLLAGGRRVLLDCGMFQGKEEARNHAPFGFDPKEVDAVLLTHAHLDHVGRL 68
Query: 381 PYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFDLFTLDDVDMAFDRIVQLKY 560
P + + G P+YAT + ++ + D + V + F +DV+ A + L+Y
Sbjct: 69 P-KLFREGYRGPVYATRATALLMEIVLEDALK----VMDEPFFGPEDVEEALGHLRPLEY 123
Query: 561 NQSIEM 578
+ + +
Sbjct: 124 GEWLRL 129
>UniRef50_A4VJP5 Cluster: Metallo-beta-lactamase superfamily
protein; n=11; Gammaproteobacteria|Rep:
Metallo-beta-lactamase superfamily protein - Pseudomonas
stutzeri (strain A1501)
Length = 505
Score = 36.7 bits (81), Expect = 0.47
Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 8/114 (7%)
Frame = +3
Query: 186 LHCLSGAGEETPPCYVLQI-DEFKFLLDCGW-----DEKFD--MVFIKELKRHVNSIDAV 341
L L + T CY+++ D + LL+CG +E+ D F + K S+DAV
Sbjct: 40 LSFLGAIQQVTGSCYLIETHDGARVLLECGMHQGRREEESDNRAAFAFDPK----SLDAV 95
Query: 342 LISHSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFD 503
++SH+ H G LP V LG P++ T ++ ++ + D Q + +E++
Sbjct: 96 VLSHAHIDHSGLLPRLVA-LGYRGPVHCTEATAELLELMLLDSAQIQEKDAEWE 148
>UniRef50_Q226C1 Cluster: Putative FEG protein; n=2; Tetrahymena
thermophila SB210|Rep: Putative FEG protein -
Tetrahymena thermophila SB210
Length = 178
Score = 36.7 bits (81), Expect = 0.47
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +3
Query: 279 EKFDMVF-IKELKRHVNSIDAVLISHSDPLHLGALPYAVGKLGLSCPIYATLP 434
EK ++ I E ++ ID VLISH H+GALPY PIY T P
Sbjct: 42 EKIKQIWNIPEKRKWDQIIDLVLISHFHLDHIGALPYFTEIYNYDGPIYMTSP 94
>UniRef50_A7DPN0 Cluster: Beta-lactamase domain protein; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep:
Beta-lactamase domain protein - Candidatus
Nitrosopumilus maritimus SCM1
Length = 421
Score = 36.7 bits (81), Expect = 0.47
Identities = 18/65 (27%), Positives = 37/65 (56%)
Frame = +3
Query: 330 IDAVLISHSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFDLF 509
+DA++I+H+ H G +P + + +YAT P + + ++ + D+ + KN FDL
Sbjct: 52 LDAIIITHAHLDHSGNVPSLF--VSGNTDVYATPPTFDLSKLLIEDMLKIEKNSHPFDLP 109
Query: 510 TLDDV 524
L+++
Sbjct: 110 ELNNM 114
>UniRef50_UPI000049831F Cluster: cleavage and polyadenylation
specificity factor 73 kDa subunit, putative; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: cleavage and
polyadenylation specificity factor 73 kDa subunit,
putative - Entamoeba histolytica HM-1:IMSS
Length = 755
Score = 36.3 bits (80), Expect = 0.62
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 5/150 (3%)
Frame = +3
Query: 201 GAGEETP-PCYVLQIDEFKFLLDCG-WDEKFDMVFIKELKRH--VNSIDAVLISHSDPLH 368
GAG E C++L+ +LDCG K L H ++SI+ + ++H H
Sbjct: 27 GAGREVGRSCFILKYMGHNIMLDCGVHPAKPHGEAALPLFEHADIDSIELLCVTHYHVDH 86
Query: 369 LGALPYAVGKLGLSCPIYATLPVYKM-GQMFMYDLYQAHKNVSEFDLFTLDDVDMAFDRI 545
+LPY + + + T P ++ G++F + +Q + +V DRI
Sbjct: 87 CASLPYLILERQFKGKVLMTPPTKEIFGELFK-EFHQMSSTIQPPKSVNPKEV---IDRI 142
Query: 546 VQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
+K+++ E G++I AGH LG
Sbjct: 143 DTIKFHELQEYN----GMKIWCFNAGHILG 168
>UniRef50_Q9SRR3 Cluster: F21O3.24 protein; n=3; core
eudicotyledons|Rep: F21O3.24 protein - Arabidopsis
thaliana (Mouse-ear cress)
Length = 620
Score = 36.3 bits (80), Expect = 0.62
Identities = 21/52 (40%), Positives = 27/52 (51%)
Frame = +3
Query: 330 IDAVLISHSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHK 485
ID VLIS+ P+ L LP+ G IY T K+GQ+ M D+ HK
Sbjct: 102 IDIVLISN--PMGLLGLPFLTQNPGFFAKIYMTEVTAKIGQLMMEDIVSMHK 151
>UniRef50_Q9FMW0 Cluster: Genomic DNA, chromosome 5, P1 clone:MLE2;
n=8; Magnoliophyta|Rep: Genomic DNA, chromosome 5, P1
clone:MLE2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 528
Score = 36.3 bits (80), Expect = 0.62
Identities = 15/40 (37%), Positives = 27/40 (67%)
Frame = +3
Query: 309 LKRHVNSIDAVLISHSDPLHLGALPYAVGKLGLSCPIYAT 428
++R + I+AV+I+H H+GALP+ + L + PI+A+
Sbjct: 161 IRRWKHKIEAVVITHGHEDHIGALPWVIPALDPNTPIFAS 200
>UniRef50_Q9HKD3 Cluster: Putative uncharacterized protein Ta0668;
n=2; Thermoplasma|Rep: Putative uncharacterized protein
Ta0668 - Thermoplasma acidophilum
Length = 322
Score = 36.3 bits (80), Expect = 0.62
Identities = 21/65 (32%), Positives = 34/65 (52%)
Frame = +3
Query: 213 ETPPCYVLQIDEFKFLLDCGWDEKFDMVFIKELKRHVNSIDAVLISHSDPLHLGALPYAV 392
+T Y L+ D+ FL+D G + IK +++++ ID V I+H HLG + Y
Sbjct: 28 KTANIYRLETDDSAFLIDSGMSDNS----IKSIEQNLKKIDFVFITHLHIDHLGGVLYLH 83
Query: 393 GKLGL 407
K G+
Sbjct: 84 EKYGI 88
>UniRef50_Q6D8S0 Cluster: Anaerobic nitric oxide reductase
flavorubredoxin; n=58; root|Rep: Anaerobic nitric oxide
reductase flavorubredoxin - Erwinia carotovora subsp.
atroseptica (Pectobacterium atrosepticum)
Length = 509
Score = 36.3 bits (80), Expect = 0.62
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +3
Query: 240 IDEFKFLLDCGWDEKFDMVFIKELKRHV--NSIDAVLISHSDPLHLGALPYAVGKLGLSC 413
I E K +L D KF F++ L V N+ID ++I+H++ H GAL + ++ +
Sbjct: 40 IREEKTVLIDTVDHKFSREFVQNLMAEVDLNTIDYIVINHAEEDHAGALSELMARIP-NT 98
Query: 414 PIYAT 428
PIY T
Sbjct: 99 PIYCT 103
>UniRef50_Q4SGI2 Cluster: Chromosome undetermined SCAF14594, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF14594, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 588
Score = 35.9 bits (79), Expect = 0.82
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 320 CKFNRCCTNITLGSSTFRSSSICSWKTRS*LSNICNSTGIQ 442
C+F +C G+S SS C W+ +S ++N+ NS+ +Q
Sbjct: 62 CRFKKCLMRSASGASPSGRSSACCWEMQSAMNNMMNSSQLQ 102
>UniRef50_Q89VA5 Cluster: Bll1142 protein; n=7;
Bradyrhizobiaceae|Rep: Bll1142 protein - Bradyrhizobium
japonicum
Length = 244
Score = 35.9 bits (79), Expect = 0.82
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = +3
Query: 201 GAGEETPPCYVLQIDEFKFLLDCGWDEKFDMVFIKELKRHVNSIDAVLISHSDPLHLGAL 380
G+G C+ + E FL+DCG + +K L+ N ID +LI+H H L
Sbjct: 13 GSGGRLNTCFHVAGREANFLIDCGASA---LPALKRLEIDRNDIDLILITHFHGDHFAGL 69
Query: 381 PYAV 392
P+ +
Sbjct: 70 PFVL 73
>UniRef50_Q2G7Y1 Cluster: Beta-lactamase-like protein; n=1;
Novosphingobium aromaticivorans DSM 12444|Rep:
Beta-lactamase-like protein - Novosphingobium
aromaticivorans (strain DSM 12444)
Length = 535
Score = 35.9 bits (79), Expect = 0.82
Identities = 24/109 (22%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Frame = +3
Query: 180 IKLHCLSGAGEETPPCYVLQIDEFKFLLDCGW---DEKFDMVFIKELKRHVNSIDAVLIS 350
++L+ A T C+ + + + L+DCG + + + L V+ ID V+++
Sbjct: 3 LRLNVHGAARTVTGSCFEFVLGDMRLLVDCGLFQGSRSLEALNHEPLDFDVHKIDGVIVT 62
Query: 351 HSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSE 497
H+ H G LP + G PI+ T + ++ + D + ++ +E
Sbjct: 63 HAHIDHSGLLPRLAAE-GYEGPIWCTPETAALLKVMLADAGRIQESEAE 110
>UniRef50_Q1NVJ9 Cluster: Beta-lactamase-like:RNA-metabolising
metallo-beta-lactamase; n=2; Deltaproteobacteria|Rep:
Beta-lactamase-like:RNA-metabolising
metallo-beta-lactamase - delta proteobacterium MLMS-1
Length = 469
Score = 35.9 bits (79), Expect = 0.82
Identities = 42/169 (24%), Positives = 71/169 (42%), Gaps = 17/169 (10%)
Frame = +3
Query: 180 IKLHCLSGAGEETPPCYVLQIDEFKFLLDCG-WDEKFDMVFIKELKRHVN--SIDAVLIS 350
+KL AG T ++L+++ + LLDCG + K F + N +D +++S
Sbjct: 1 MKLTFHGAAGTVTGSQHLLEVNGKRILLDCGLFQGKRKEAFELNRQGFCNGKKLDCLILS 60
Query: 351 HSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEF---------- 500
H+ H G +P V K G IY T + + + D + +F
Sbjct: 61 HAHIDHSGNIPCLV-KSGFDGDIYTTQATRDLCAIMLMDSANIQEQDVQFVNKRRERNGQ 119
Query: 501 ----DLFTLDDVDMAFDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
L+T +DV +A + V + + E+ G+ +T AGH LG
Sbjct: 120 QPFEPLYTKEDVVLAMPQFVGIAPGRRREIYP---GIHLTLAEAGHMLG 165
>UniRef50_A6Q9T8 Cluster: RNA-metabolising metallo-beta-lactamase;
n=2; Sulfurovum sp. NBC37-1|Rep: RNA-metabolising
metallo-beta-lactamase - Sulfurovum sp. (strain NBC37-1)
Length = 467
Score = 35.9 bits (79), Expect = 0.82
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Frame = +3
Query: 201 GAGEE-TPPCYVLQIDE-FKFLLDCG-WDEKFDMVFIKELKRHVNSIDAVLISHSDPLHL 371
GA E T C++L+ID + L+DCG + + + S+D +L++H+ H+
Sbjct: 8 GAAEVVTGSCHLLEIDSGTRILVDCGMFQGREEHRNYGLFDFDAKSVDYLLVTHAHLDHV 67
Query: 372 GALPYAVGKLGLSCPIYATLPVYKMGQMFMYD 467
G +P V K G S I AT + + ++ + D
Sbjct: 68 GRIPKLV-KEGFSGTIVATDATFALAEVVLLD 98
>UniRef50_A4EC58 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 459
Score = 35.9 bits (79), Expect = 0.82
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = +3
Query: 258 LLDCGWDEKFDMVFIKELKRHVNSIDAVLISHSDPLHLGALP 383
L+DCG DE+ V ++ +V+ IDAV ++H D H G LP
Sbjct: 238 LVDCGLDER---VVAALVRNNVHHIDAVFVTHWDEDHWGGLP 276
>UniRef50_A1ZG78 Cluster: Exonuclease of the beta-lactamase fold
involved in RNA processing; n=1; Microscilla marina ATCC
23134|Rep: Exonuclease of the beta-lactamase fold
involved in RNA processing - Microscilla marina ATCC
23134
Length = 476
Score = 35.9 bits (79), Expect = 0.82
Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 9/105 (8%)
Frame = +3
Query: 180 IKLHCLSGAGEETPPCYVLQID-EFKFLLDCGWD---EKFDMVFIKELKRHV-----NSI 332
++L A + T ++L++D +FK L+DCG D E+ + L + + + I
Sbjct: 1 MRLTFWGAARQVTGSMHLLELDNDFKVLIDCGHDLERERKPLTDENGLYQGIFPFEPSQI 60
Query: 333 DAVLISHSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYD 467
+AV+++H+ H G LP V + G IY T Y + + ++D
Sbjct: 61 NAVVLTHAHIDHSGFLPNLV-REGFEGVIYCTDATYDLTNLLLHD 104
>UniRef50_A7PHF3 Cluster: Chromosome chr17 scaffold_16, whole genome
shotgun sequence; n=4; Viridiplantae|Rep: Chromosome
chr17 scaffold_16, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 880
Score = 35.9 bits (79), Expect = 0.82
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +3
Query: 309 LKRHVNSIDAVLISHSDPLHLGALPYAVGKLGLSCPIYAT 428
+K+ + I+AV+I+H H+GALP+ + L PI+A+
Sbjct: 129 IKKWSHKIEAVVITHGHEDHIGALPWVIPALDSHTPIFAS 168
>UniRef50_Q4TC63 Cluster: Chromosome undetermined SCAF7053, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF7053, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 810
Score = 35.5 bits (78), Expect = 1.1
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Frame = +3
Query: 201 GAGEETP-PCYVLQIDEFKFLLDCGWD---EKFDMVFIKELKRHVNSIDAVLISHSDPLH 368
GAG+E C +L+ K +LDCG E D + +L ID +LISH H
Sbjct: 15 GAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPAE-IDLLLISHFHLDH 73
Query: 369 LGALPYAVGKL---GLSCPIYATLPVYK 443
GALP+ + K G + +AT +Y+
Sbjct: 74 CGALPWFLQKTSFKGRTFMTHATKAIYR 101
>UniRef50_Q9AA00 Cluster: Metallo-beta-lactamase family protein;
n=2; Caulobacter|Rep: Metallo-beta-lactamase family
protein - Caulobacter crescentus (Caulobacter
vibrioides)
Length = 530
Score = 35.5 bits (78), Expect = 1.1
Identities = 31/113 (27%), Positives = 45/113 (39%), Gaps = 3/113 (2%)
Frame = +3
Query: 168 MTSIIKLHCLSGAGEETPPCYVLQIDEFKFLLDCGW---DEKFDMVFIKELKRHVNSIDA 338
MT + H AG T C L L+DCG + + + +DA
Sbjct: 1 MTISLTFH--GAAGCVTGFCARLVTPRTTVLIDCGMFQGSKTLKALNYQPFPFDAGQVDA 58
Query: 339 VLISHSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSE 497
VL++H+ H G LP + G PIYAT +G + + D +N E
Sbjct: 59 VLLTHAHIDHSGLLPKLM-LAGFEGPIYATAATRDLGAVMLVDAGGIQENEVE 110
>UniRef50_Q5QU60 Cluster: Predicted exonuclease of the
beta-lactamase fold; n=2; Alteromonadales|Rep: Predicted
exonuclease of the beta-lactamase fold - Idiomarina
loihiensis
Length = 452
Score = 35.5 bits (78), Expect = 1.1
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Frame = +3
Query: 195 LSGAGEETPPCYVLQIDEFKFLLDCGWDEKFDMVFIKE---LKRHVNSIDAVLISHSDPL 365
L GA T Y+++ + + L+DCG + + + + L +N +D V+++H+
Sbjct: 6 LGGAETVTGSKYLVETESTRILIDCGLFQGYKWLRRRNWQPLPMGINQVDGVVLTHAHLD 65
Query: 366 HLGALPYAVGKLGLSCPIYA 425
H G +P + K G P++A
Sbjct: 66 HSGFVP-VLYKEGFRGPVFA 84
>UniRef50_Q3ADT3 Cluster: Anaerobic nitric oxide reductase
flavorubredoxin; n=6; Clostridiales|Rep: Anaerobic
nitric oxide reductase flavorubredoxin -
Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 396
Score = 35.5 bits (78), Expect = 1.1
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +3
Query: 243 DEFKFLLDCGWDEKFDMVFIKELKRHV--NSIDAVLISHSDPLHLGALP 383
DE L+D W KFD ++K+L + N ID V+ H + H GALP
Sbjct: 42 DEKVALIDTAWI-KFDKEYVKKLSEEIDLNKIDYVVALHGEIDHSGALP 89
>UniRef50_Q1B028 Cluster: Beta-lactamase-like protein; n=1;
Rubrobacter xylanophilus DSM 9941|Rep:
Beta-lactamase-like protein - Rubrobacter xylanophilus
(strain DSM 9941 / NBRC 16129)
Length = 813
Score = 35.5 bits (78), Expect = 1.1
Identities = 26/94 (27%), Positives = 39/94 (41%)
Frame = +3
Query: 165 KMTSIIKLHCLSGAGEETPPCYVLQIDEFKFLLDCGWDEKFDMVFIKELKRHVNSIDAVL 344
K + L GAGE ++L + L+D G + + + +D +
Sbjct: 387 KSRPTLAFRALGGAGEVGGSSHLLDFGSTRVLVDAGIKPDGRGQLAPDFEE-IGPLDGAI 445
Query: 345 ISHSDPLHLGALPYAVGKLGLSCPIYATLPVYKM 446
I+H+ H GALP V K PIY T P K+
Sbjct: 446 ITHAHLDHCGALPLLV-KNHPQLPIYCTPPSAKL 478
>UniRef50_Q194D1 Cluster: Beta-lactamase-like; n=3; Clostridia|Rep:
Beta-lactamase-like - Desulfitobacterium hafniense
(strain DCB-2)
Length = 570
Score = 35.5 bits (78), Expect = 1.1
Identities = 23/99 (23%), Positives = 47/99 (47%), Gaps = 3/99 (3%)
Frame = +3
Query: 180 IKLHCLSGAGEETPPCYVLQIDEFKFLLDCG---WDEKFDMVFIKELKRHVNSIDAVLIS 350
+KL+ A T Y+++ + ++ L+DCG + + + + ++AV+++
Sbjct: 1 MKLYFYGAAQVVTGSSYLVESEGYRVLIDCGLFQGSKALKELNYGDFPYNPAELNAVILT 60
Query: 351 HSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYD 467
H+ H G +P + K G IYAT K+ + + D
Sbjct: 61 HAHTDHSGLIPKLI-KYGFQGKIYATPETIKLCSVMLPD 98
>UniRef50_Q12E81 Cluster: Beta-lactamase-like; n=14;
Proteobacteria|Rep: Beta-lactamase-like - Polaromonas
sp. (strain JS666 / ATCC BAA-500)
Length = 453
Score = 35.1 bits (77), Expect = 1.4
Identities = 25/110 (22%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Frame = +3
Query: 180 IKLHCLSGAGEETPPCYVLQIDEFKFLLDCGWDEKFDMVFIKE---LKRHVNSIDAVLIS 350
++L L T Y++Q D+ + L+DCG + + + ++ L +IDAV+++
Sbjct: 1 MRLQFLGATDTVTGSKYLVQHDKARVLVDCGLFQGYKQLRLRNWSPLPVKPAAIDAVVLT 60
Query: 351 HSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEF 500
H+ H G LP + + G +Y T + ++ + D + +E+
Sbjct: 61 HAHIDHSGYLP-LLARQGFRGKVYCTPATADLCRILLPDSGHLQEEEAEY 109
>UniRef50_A6Q3H4 Cluster: RNA-metabolising metallo-beta-lactamase;
n=8; Proteobacteria|Rep: RNA-metabolising
metallo-beta-lactamase - Nitratiruptor sp. (strain
SB155-2)
Length = 462
Score = 35.1 bits (77), Expect = 1.4
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Frame = +3
Query: 201 GAGEE-TPPCYVLQIDE-FKFLLDCGWDEKFD-MVFIKELKRHVNSIDAVLISHSDPLHL 371
GA E T C+ ++ D+ K L+DCG + D + L + ID +L++H H+
Sbjct: 8 GAAEVVTGSCHFVKFDDGTKALIDCGMFQGLDEWKNYEPLGFNAKEIDYLLVTHGHLDHV 67
Query: 372 GALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFD 503
G +P + K G I AT +++ ++ + D AH +F+
Sbjct: 68 GRIP-LLYKEGFRGKIIATAATFELMKIVLLD--TAHLMQEDFE 108
>UniRef50_A1S0I1 Cluster: Beta-lactamase domain protein; n=1;
Thermofilum pendens Hrk 5|Rep: Beta-lactamase domain
protein - Thermofilum pendens (strain Hrk 5)
Length = 441
Score = 35.1 bits (77), Expect = 1.4
Identities = 29/102 (28%), Positives = 51/102 (50%)
Frame = +3
Query: 330 IDAVLISHSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFDLF 509
++AV +SH HL A+P A+ + G + PIY + P ++G Y ++ LF
Sbjct: 55 VEAVFVSHLHEDHLAAVP-ALVRRGFNGPIYMSAPTAELGIKQWYKWTVLEEDGK--PLF 111
Query: 510 TLDDVDMAFDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
T +D D A ++V+ + S+ G + + +GH+LG
Sbjct: 112 TEEDCDEA-RKMVKTVGDGSVVTSG---DVEVAFHQSGHALG 149
>UniRef50_A4STH4 Cluster: Anaerobic nitric oxide reductase
flavorubredoxin; n=3; Gammaproteobacteria|Rep: Anaerobic
nitric oxide reductase flavorubredoxin - Aeromonas
salmonicida (strain A449)
Length = 521
Score = 35.1 bits (77), Expect = 1.4
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +3
Query: 276 DEKFDMVFIKELKRHVN--SIDAVLISHSDPLHLGALPYAVGKLGLSCPIYAT 428
D KF F++ L ++ SID ++I+H++ H GAL + ++ PIY T
Sbjct: 52 DHKFSREFVQNLAAEIDLASIDVIVINHAEEDHAGALTELMARIP-GTPIYCT 103
>UniRef50_Q31DU4 Cluster: Phosphonate metabolism accessory protein
precursor; n=2; Gammaproteobacteria|Rep: Phosphonate
metabolism accessory protein precursor - Thiomicrospira
crunogena (strain XCL-2)
Length = 255
Score = 34.7 bits (76), Expect = 1.9
Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 4/127 (3%)
Frame = +3
Query: 225 CYVLQIDEFKFLLDCGWDEKFDMVFIKELKRHVNSIDAVLISHSDPLHL-GALPYAVGKL 401
C VL+++ +FL+D G+ + ++E K S+DAVL++H H+ G P G +
Sbjct: 43 CGVLEVNGVRFLIDAGY------LGLEE-KFPPGSLDAVLLTHFHMDHVQGLFPIRWG-M 94
Query: 402 GLSCPIYATLPVYKMGQMFMY-DLYQAHKNVSEFDLFTLDDVDMAFDRIVQLKYNQS--I 572
G S P+++ + +F Y ++ K F+ F + + +V K +
Sbjct: 95 GESIPVFSPDDPHGCDDLFKYPGIFDFSKKSLPFEPFHFKGIKITPVPLVHSKLTMGYIV 154
Query: 573 EMKGKGL 593
E GK L
Sbjct: 155 EFNGKRL 161
>UniRef50_Q1PVS7 Cluster: Putative uncharacterized protein; n=1;
Candidatus Kuenenia stuttgartiensis|Rep: Putative
uncharacterized protein - Candidatus Kuenenia
stuttgartiensis
Length = 468
Score = 34.7 bits (76), Expect = 1.9
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Frame = +3
Query: 177 IIKLHCLSGAGEETPPCYVLQIDEFKFLLDCGWDEKFDMVFIKELKRHVN----SIDAVL 344
+I+L + A T ++++ LLDCG + E R+ + +DA++
Sbjct: 1 MIELEFIGAAKTVTGSKHLIRTSRASVLLDCGLFQGHRKE-ADEKNRNFSIDGKQLDAIV 59
Query: 345 ISHSDPLHLGALPYAVGKLGLSCPIYAT 428
+SH+ H GALP + K G PIYAT
Sbjct: 60 LSHAHIDHSGALP-CIFKNGYRGPIYAT 86
>UniRef50_Q4UBM2 Cluster: Cleavage and polyadenylation specificty
factor, subunit, putative; n=4; Piroplasmida|Rep:
Cleavage and polyadenylation specificty factor, subunit,
putative - Theileria annulata
Length = 1282
Score = 34.7 bits (76), Expect = 1.9
Identities = 38/174 (21%), Positives = 69/174 (39%), Gaps = 18/174 (10%)
Frame = +3
Query: 168 MTSIIKLHCLSGAGEETPPCYVLQIDEFKFLLDCGWDEKFDMVFIKELKRHVN--SIDAV 341
M +++ L E C ++ D + DCG V + V+ ++
Sbjct: 1 MDDRVRITVLGAGCEVGRSCVYVERDNSCLMFDCGLHPALSGVGALPVFEAVDISKVEVC 60
Query: 342 LISHSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAH-----KNVSEFD- 503
L++H H GA+PY + K + I T + + D + K + + D
Sbjct: 61 LVTHFHLDHCGAVPYLLSKTKFNGRILMTPATKSICHLLWTDYARMEQLLTVKTIFDDDD 120
Query: 504 ----------LFTLDDVDMAFDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
L++ +DV+ A DRI + ++Q I + ++I+ AGH LG
Sbjct: 121 GMDELVCGSGLYSFEDVEYALDRIETIDFHQEITVN----DIKISCYRAGHVLG 170
>UniRef50_Q8RAH0 Cluster: Predicted hydrolase of the
metallo-beta-lactamase superfamily; n=9; Bacteria|Rep:
Predicted hydrolase of the metallo-beta-lactamase
superfamily - Thermoanaerobacter tengcongensis
Length = 554
Score = 34.3 bits (75), Expect = 2.5
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Frame = +3
Query: 180 IKLHCLSGAGEETPPCYVLQIDEFKFLLDCGW----DEKF--DMVF--IKELKRHVNSID 335
+K+ L G E V + ++DCG DE D+V I L ++ +
Sbjct: 7 LKIIPLGGLNEIGKNMTVFEYGNDIIVVDCGLAFPDDEMLGIDLVIPDITYLLKNREKVK 66
Query: 336 AVLISHSDPLHLGALPYAVGKLGLSCPIYAT 428
A++++H H+GALPY + +L + PIY T
Sbjct: 67 AIVLTHGHEDHIGALPYVLKQLNV--PIYGT 95
>UniRef50_Q41CQ7 Cluster: Beta-lactamase-like; n=1; Exiguobacterium
sibiricum 255-15|Rep: Beta-lactamase-like -
Exiguobacterium sibiricum 255-15
Length = 328
Score = 34.3 bits (75), Expect = 2.5
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Frame = +3
Query: 225 CYVLQIDEFKFLLDCGWD-EKFDMVF---IKELKRHVNSIDAVLISHSDPLHLGALPYAV 392
CYVL+ D L+DCG D E+ ++++ V+ +D V+++H H G L Y
Sbjct: 23 CYVLRTDSENILIDCGPDTEQAWQAMQDGLQKIGLTVSMLDKVIVTHHHADHAG-LAYRF 81
Query: 393 GKLGLSCPIYATL-PVYKMGQMFM 461
+ G+ +A L P + Q F+
Sbjct: 82 SEQGIPIYGHARLRPYLEQDQAFL 105
>UniRef50_Q97DE0 Cluster: Metallo-beta-lactamase superfamily
hydrolase; n=11; Clostridia|Rep: Metallo-beta-lactamase
superfamily hydrolase - Clostridium acetobutylicum
Length = 261
Score = 33.9 bits (74), Expect = 3.3
Identities = 20/67 (29%), Positives = 30/67 (44%)
Frame = +3
Query: 243 DEFKFLLDCGWDEKFDMVFIKELKRHVNSIDAVLISHSDPLHLGALPYAVGKLGLSCPIY 422
D K L+D G K +KE+K N ID + ++H H+ + K + PIY
Sbjct: 20 DNSKVLIDAGLSGKTIEKALKEIKEDPNEIDGIFVTHEHSDHIKGVGVLSRKYNI--PIY 77
Query: 423 ATLPVYK 443
A +K
Sbjct: 78 ANELTWK 84
>UniRef50_Q5NLC0 Cluster: Metallo-beta-lactamase hydrolase subunit;
n=8; Sphingomonadales|Rep: Metallo-beta-lactamase
hydrolase subunit - Zymomonas mobilis
Length = 546
Score = 33.9 bits (74), Expect = 3.3
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +3
Query: 288 DMVFIKELKRHVNSIDAVLISHSDPLHLGALPYAVGKLGLSCPIYAT 428
D+ FI+E + ++I+H H+GA+PY LG+ PIYAT
Sbjct: 55 DIEFIEE---RAKDLLGIVITHGHEDHIGAIPYLAADLGV--PIYAT 96
>UniRef50_Q83XN5 Cluster: Putative beta-lactamase; n=1; Streptomyces
cattleya|Rep: Putative beta-lactamase - Streptomyces
cattleya
Length = 329
Score = 33.9 bits (74), Expect = 3.3
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 315 RHVNSIDAVLISHSDPLHLGALPYAVGKLGLSCPIYAT 428
RH+ + D +L++H H+G LPY + K S P+ AT
Sbjct: 110 RHLRAADLILLTHGHYDHIGDLPYVMRKFP-SAPVVAT 146
>UniRef50_Q3Y227 Cluster: Beta-lactamase-like; n=1; Enterococcus
faecium DO|Rep: Beta-lactamase-like - Enterococcus
faecium DO
Length = 274
Score = 33.9 bits (74), Expect = 3.3
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Frame = +3
Query: 252 KFLLDCGWDEKFDMVFIKELKRHVNSIDAVLISHSDPLHLGALPYAVGKLGLSCPIY--- 422
K+L D G ++K + ++ +N ++AV+ISH H G L Y K G + PIY
Sbjct: 32 KYLFDAGANKKL-VYNATKMGETLNDLEAVIISHGHSDHTGGLRYL--KSG-NAPIYTAE 87
Query: 423 -ATLPVY-KMGQMFMY 464
TLP Y K+ F+Y
Sbjct: 88 GVTLPHYLKILTTFLY 103
>UniRef50_Q024Z8 Cluster: Beta-lactamase domain protein precursor;
n=1; Solibacter usitatus Ellin6076|Rep: Beta-lactamase
domain protein precursor - Solibacter usitatus (strain
Ellin6076)
Length = 269
Score = 33.9 bits (74), Expect = 3.3
Identities = 22/86 (25%), Positives = 39/86 (45%)
Frame = +3
Query: 171 TSIIKLHCLSGAGEETPPCYVLQIDEFKFLLDCGWDEKFDMVFIKELKRHVNSIDAVLIS 350
T+I+K C+ +G +L + + L+D G + + + + SIDA++++
Sbjct: 9 TNIVKF-CVLASGSSGNAA-LLATENTRILVDAGLSMRELRKRLALIGETLESIDAIIVT 66
Query: 351 HSDPLHLGALPYAVGKLGLSCPIYAT 428
H H+ LP GL IY T
Sbjct: 67 HEHSDHVSGLPVLARAKGLRAVIYMT 92
>UniRef50_A6PE29 Cluster: Beta-lactamase domain protein; n=1;
Shewanella sediminis HAW-EB3|Rep: Beta-lactamase domain
protein - Shewanella sediminis HAW-EB3
Length = 526
Score = 33.9 bits (74), Expect = 3.3
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Frame = +3
Query: 216 TPPCYVLQIDE-FKFLLDCGWDEKFDMVFIKELKR-----HVNSIDAVLISHSDPLHLGA 377
T C+ L I+E L+DCG + + ++ + SI A+L++H H+G
Sbjct: 19 TGSCHQLVINEKSSLLIDCGLFQGAETAGSSNAEQLKIAFDIGSITALLVTHCHIDHVGR 78
Query: 378 LPYAVGKLGLSCPIYATLPVYKMGQMFMYD 467
+PY + G PI+AT + M + D
Sbjct: 79 IPYLLA-AGFDQPIFATTATAALLPMVIED 107
>UniRef50_Q7QUX2 Cluster: GLP_577_37199_34023; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_577_37199_34023 - Giardia lamblia
ATCC 50803
Length = 1058
Score = 33.9 bits (74), Expect = 3.3
Identities = 15/57 (26%), Positives = 33/57 (57%)
Frame = +3
Query: 228 YVLQIDEFKFLLDCGWDEKFDMVFIKELKRHVNSIDAVLISHSDPLHLGALPYAVGK 398
Y+L I++ L+DCG ++ +++ H+++I A+L++ + H GA Y + +
Sbjct: 19 YLLTINDTLLLVDCGLAAPYE-TYLRVYDDHIDNISAILLTSAALEHAGACLYILSR 74
>UniRef50_Q6BHT7 Cluster: Similar to CA2422|IPF14997 Candida
albicans IPF14997 unknown function; n=1; Debaryomyces
hansenii|Rep: Similar to CA2422|IPF14997 Candida
albicans IPF14997 unknown function - Debaryomyces
hansenii (Yeast) (Torulaspora hansenii)
Length = 228
Score = 33.9 bits (74), Expect = 3.3
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +3
Query: 402 GLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFDLFTLDDVDMAFDRIVQLKYN 563
GLS I L YK+GQ + + +N+S+ +F +DM D I+ +K+N
Sbjct: 87 GLSIQIDKLLTEYKLGQAIEHYIEITGENISKDLIFEKICIDMVDDSIIDIKFN 140
>UniRef50_A2SUA2 Cluster: Beta-lactamase domain protein; n=1;
Methanocorpusculum labreanum Z|Rep: Beta-lactamase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 271
Score = 33.9 bits (74), Expect = 3.3
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +3
Query: 225 CYVLQIDEFKFLLDCGWDEKFDMVFIKELKRHVNSIDAVLISHSDPLHLGALPYAVGKLG 404
C+ ++ K LLD G+ + F + K+L ++++ V+ISH H G LP+ + +
Sbjct: 28 CFYIEDGTEKILLDTGYSDLF-IRNAKKLGTDLSALTKVVISHGHDDHTGGLPHLLERFD 86
Query: 405 LS 410
S
Sbjct: 87 TS 88
>UniRef50_P54122 Cluster: UPF0036 protein Cgl1970/cg2160; n=31;
Actinobacteria (class)|Rep: UPF0036 protein
Cgl1970/cg2160 - Corynebacterium glutamicum
(Brevibacterium flavum)
Length = 718
Score = 33.9 bits (74), Expect = 3.3
Identities = 21/91 (23%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Frame = +3
Query: 180 IKLHCLSGAGEETPPCYVLQIDEFKFLLDCG------WDEKFDMVF--IKELKRHVNSID 335
++++ L G E V + + ++DCG + D++ ++ H++ +D
Sbjct: 155 LRIYALGGISEIGRNMTVFEYNNRLLIVDCGVLFPSSGEPGVDLILPDFGPIEDHLHRVD 214
Query: 336 AVLISHSDPLHLGALPYAVGKLGLSCPIYAT 428
A++++H H+GA+P+ + KL PI A+
Sbjct: 215 ALVVTHGHEDHIGAIPWLL-KLRNDIPILAS 244
>UniRef50_Q9NV88 Cluster: Integrator complex subunit 9; n=41;
Eumetazoa|Rep: Integrator complex subunit 9 - Homo
sapiens (Human)
Length = 658
Score = 33.9 bits (74), Expect = 3.3
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +3
Query: 180 IKLHCLSGAGEETPPCYVLQIDEFKFLLDCGWDEKFDMVFI 302
+KL+CLSG T PC VL+ +LDCG D + F+
Sbjct: 1 MKLYCLSG--HPTLPCNVLKFKSTTIMLDCGLDMTSTLNFL 39
Score = 32.7 bits (71), Expect = 7.6
Identities = 16/50 (32%), Positives = 30/50 (60%)
Frame = +3
Query: 321 VNSIDAVLISHSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDL 470
++++D +LIS+ + ALPY G + +YAT P ++G++ M +L
Sbjct: 93 LSTVDVILISNYHCMM--ALPYITEHTGFTGTVYATEPTVQIGRLLMEEL 140
>UniRef50_Q9K9I5 Cluster: BH2662 protein; n=43; Bacteria|Rep: BH2662
protein - Bacillus halodurans
Length = 555
Score = 33.5 bits (73), Expect = 4.4
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 8/87 (9%)
Frame = +3
Query: 186 LHCLSGAGEETPPCYVLQIDEFKFLLDCGW----DEKFDMVFI----KELKRHVNSIDAV 341
++ L G GE Y +Q + L+D G DE + ++ L ++ N I +
Sbjct: 11 VYALGGLGEIGKNTYAVQFQDEIILIDAGIKFPEDELLGIDYVIPDYSYLVKNENKIKGL 70
Query: 342 LISHSDPLHLGALPYAVGKLGLSCPIY 422
I+H H+G +PY + ++ + PIY
Sbjct: 71 FITHGHEDHIGGIPYLLREVNI--PIY 95
>UniRef50_Q97D03 Cluster: Metallo-beta-lactamase superfamily
hydrolase; n=1; Clostridium acetobutylicum|Rep:
Metallo-beta-lactamase superfamily hydrolase -
Clostridium acetobutylicum
Length = 245
Score = 33.5 bits (73), Expect = 4.4
Identities = 19/55 (34%), Positives = 35/55 (63%), Gaps = 4/55 (7%)
Frame = +3
Query: 228 YVLQIDEFKF-LLDCGWDEKFDMVFIKELKRH---VNSIDAVLISHSDPLHLGAL 380
Y+L+I+E ++ L+D G+ E + + F+K LK + +N I V+++H H+G L
Sbjct: 14 YLLRINENRYVLIDTGYKEDWKL-FLKRLKENGIKINEISYVILTHHHDDHVGFL 67
>UniRef50_Q81QL9 Cluster: Hydrolase, putative; n=10; Firmicutes|Rep:
Hydrolase, putative - Bacillus anthracis
Length = 217
Score = 33.5 bits (73), Expect = 4.4
Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Frame = +3
Query: 243 DEFKFLLDCGWDEKFDMVFIKELKR---HVNSIDAVLISHSDPLHLGALP 383
DE L+D G+ +F+ + + E+KR V+ + V+++H D H+G+LP
Sbjct: 27 DEMAVLIDTGFPGQFEDIQV-EMKRVGVSVDKLKVVILTHQDIDHIGSLP 75
>UniRef50_Q748A2 Cluster: Metallo-beta-lactamase family protein;
n=11; Proteobacteria|Rep: Metallo-beta-lactamase family
protein - Geobacter sulfurreducens
Length = 561
Score = 33.5 bits (73), Expect = 4.4
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 300 IKELKRHVNSIDAVLISHSDPLHLGALPYAVGKLGLSCPIYAT 428
I L+ + +L++H H+GALPY + +L L P+Y T
Sbjct: 62 ITYLRERAGRVRGILLTHGHEDHIGALPYVLQELSL--PLYGT 102
>UniRef50_Q1DC87 Cluster: Metallo-beta-lactamase family protein;
n=2; Cystobacterineae|Rep: Metallo-beta-lactamase family
protein - Myxococcus xanthus (strain DK 1622)
Length = 546
Score = 33.5 bits (73), Expect = 4.4
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +3
Query: 309 LKRHVNSIDAVLISHSDPLHLGALPYAVGKLGLSCPIYAT 428
LK++ + VL++H HLGALPY + ++ + P+Y T
Sbjct: 53 LKQNAAQLKGVLLTHGHEDHLGALPYLLNEVPV--PVYGT 90
>UniRef50_A6G7H1 Cluster: Serine/threonine kinase family protein;
n=1; Plesiocystis pacifica SIR-1|Rep: Serine/threonine
kinase family protein - Plesiocystis pacifica SIR-1
Length = 914
Score = 33.5 bits (73), Expect = 4.4
Identities = 22/62 (35%), Positives = 35/62 (56%)
Frame = +3
Query: 441 KMGQMFMYDLYQAHKNVSEFDLFTLDDVDMAFDRIVQLKYNQSIEMKGKGLGLRITPLPA 620
++GQ+F DL +AH ++E L L D+ + + Q + +QSIE K L + + LP
Sbjct: 639 RLGQLFA-DLTEAHDGLAEAKL--LSDIGTVYSK--QQEQDQSIEYFTKALQIYESRLPP 693
Query: 621 GH 626
GH
Sbjct: 694 GH 695
>UniRef50_A5UWV7 Cluster: Beta-lactamase domain protein; n=2;
Roseiflexus|Rep: Beta-lactamase domain protein -
Roseiflexus sp. RS-1
Length = 205
Score = 33.5 bits (73), Expect = 4.4
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = +3
Query: 336 AVLISHSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFDLFTL 515
A+L++H+ P H+GAL +LG+ P++A + G + D AH+ V TL
Sbjct: 49 AILLTHTHPDHIGALDEMRNRLGV--PVFAHAGPHASGVVLPVDRTLAHREVITVGASTL 106
>UniRef50_A3TIY7 Cluster: Putative uncharacterized protein; n=1;
Janibacter sp. HTCC2649|Rep: Putative uncharacterized
protein - Janibacter sp. HTCC2649
Length = 263
Score = 33.5 bits (73), Expect = 4.4
Identities = 23/71 (32%), Positives = 34/71 (47%)
Frame = +3
Query: 228 YVLQIDEFKFLLDCGWDEKFDMVFIKELKRHVNSIDAVLISHSDPLHLGALPYAVGKLGL 407
Y+++ + L+D GW ++ + + IDAVL+SHS P H L + L
Sbjct: 37 YLVEASGQRILMDPGWATFQGLLRLADPLE----IDAVLVSHSHPDHCADLLPLLRSRAL 92
Query: 408 SCPIYATLPVY 440
S P LPVY
Sbjct: 93 SEPAADPLPVY 103
>UniRef50_A5BGD5 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 665
Score = 33.5 bits (73), Expect = 4.4
Identities = 21/61 (34%), Positives = 30/61 (49%)
Frame = +3
Query: 318 HVNSIDAVLISHSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSE 497
+V ID VLIS P+ + LP+ G IY T ++GQ+ M DL +K +
Sbjct: 115 NVPFIDVVLIS--SPMGMLGLPFLSRVNGFRAKIYVTEVTARIGQLLMEDLVLMNKEFRQ 172
Query: 498 F 500
F
Sbjct: 173 F 173
>UniRef50_Q4YUZ6 Cluster: Putative uncharacterized protein; n=4;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 1171
Score = 33.5 bits (73), Expect = 4.4
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = +3
Query: 258 LLDCGWDEKFDMVFIKELKRHVNSIDAVLISHSDPLHLGALP 383
L++CGWD+ F + +K + + +D + I++ ++G LP
Sbjct: 100 LINCGWDDNFCLDDVKNIIKVCEYVDIIFITNHGLSYVGCLP 141
>UniRef50_Q59M67 Cluster: Potential response regulator protein; n=2;
Candida albicans|Rep: Potential response regulator
protein - Candida albicans (Yeast)
Length = 282
Score = 33.5 bits (73), Expect = 4.4
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +3
Query: 219 PPCYVLQIDEFKFLLDCGWDEKFDMVFIKELKRHVNSIDAVLISHSD 359
P C+++QI + K + D + FD +FI VN ID L D
Sbjct: 178 PKCHIVQIQDSKLVKDLLHKQSFDSIFIDIEMPDVNGIDIFLFVRQD 224
>UniRef50_UPI0000E0E9AB Cluster: DNA internalization-related
competence protein ComEC/Rec2; n=1; alpha
proteobacterium HTCC2255|Rep: DNA
internalization-related competence protein ComEC/Rec2 -
alpha proteobacterium HTCC2255
Length = 745
Score = 33.1 bits (72), Expect = 5.8
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Frame = +3
Query: 231 VLQIDEFKFLLDCGWD--EKFDMVFIKEL-----KRHVNSIDAVLISHSDPLHLGALPYA 389
+L +++ ++ D G D E F+MV L + H+N I A+ ISH D H G +P
Sbjct: 498 LLLVNDSAYVFDVGNDFGESFNMVNSVLLAYVNAQPHIN-IKALYISHFDKDHAGGIPRF 556
Query: 390 VGKLGLSCPIYATLPVYKMGQMFMY 464
+ L+ PIY+T + GQ ++
Sbjct: 557 ITYFPLT-PIYSTHEGCRQGQSHLW 580
>UniRef50_Q6N2A1 Cluster: Beta-lactamase-like; n=12;
Rhizobiales|Rep: Beta-lactamase-like - Rhodopseudomonas
palustris
Length = 542
Score = 33.1 bits (72), Expect = 5.8
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Frame = +3
Query: 216 TPPCYVLQIDEFKFLLDCGWDEKFDMVFIKELKRHV-----NSIDAVLISHSDPLHLGAL 380
T CY+ + +FL+DCG + +KEL + IDAVL++H+ H G L
Sbjct: 15 TGSCYLFETKGKRFLVDCGLFQGHKT--LKELNYGAFPFRPSEIDAVLLTHAHIDHCGLL 72
Query: 381 PYAVGKLGLSCPIYAT 428
P V + G I AT
Sbjct: 73 PKLV-REGFKGRILAT 87
>UniRef50_A7H6H0 Cluster: Beta-lactamase domain protein; n=2;
Anaeromyxobacter|Rep: Beta-lactamase domain protein -
Anaeromyxobacter sp. Fw109-5
Length = 550
Score = 33.1 bits (72), Expect = 5.8
Identities = 23/94 (24%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Frame = +3
Query: 168 MTSIIKLHCLSGAGEETPPCYVLQIDEFKFLLDCGW---DEKFDMVFIKE----LKRHVN 326
M +++ L G GE C ++ D ++DCG +E + I L+
Sbjct: 1 MAPPVRIVPLGGLGEIGMNCMAIEADGRMAVVDCGILFPNEPIGVDVIAPDLGWLRERRE 60
Query: 327 SIDAVLISHSDPLHLGALPYAVGKLGLSCPIYAT 428
+ A+ ++H H+GALP+ + + + P+Y T
Sbjct: 61 QVGAIYLTHGHEDHIGALPFLLRE--VKAPVYGT 92
>UniRef50_A6LMC9 Cluster: Beta-lactamase domain protein; n=1;
Thermosipho melanesiensis BI429|Rep: Beta-lactamase
domain protein - Thermosipho melanesiensis BI429
Length = 247
Score = 33.1 bits (72), Expect = 5.8
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Frame = +3
Query: 252 KFLLDCGWDEKFDMVFIKELKRHVNSIDAVLISHSDPLHLGALPYAVGKLGLSCPIY--- 422
+ L D G + F + K++K + I +++SH H+G L Y +GK ++ P+Y
Sbjct: 28 EILFDTGASDVF-IKNAKKMKVDLRGIKKIVVSHGHYDHVGGLKYLIGK--VNAPVYIHK 84
Query: 423 -ATLPVYKMGQMFM 461
A +P Y G F+
Sbjct: 85 NAVIPKYS-GDRFV 97
>UniRef50_A5K7P0 Cluster: RNA-metabolising metallo-beta-lactamase
domain containing protein; n=1; Plasmodium vivax|Rep:
RNA-metabolising metallo-beta-lactamase domain
containing protein - Plasmodium vivax
Length = 911
Score = 33.1 bits (72), Expect = 5.8
Identities = 19/56 (33%), Positives = 26/56 (46%)
Frame = +3
Query: 300 IKELKRHVNSIDAVLISHSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYD 467
I LKR ID V+ISH H+GALP+ L I + P + + + D
Sbjct: 100 INNLKRINEMIDCVIISHFHMDHIGALPFFTEILKYRGTILMSYPTKALSPILLLD 155
>UniRef50_A5K5Q9 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 1308
Score = 33.1 bits (72), Expect = 5.8
Identities = 24/110 (21%), Positives = 48/110 (43%), Gaps = 7/110 (6%)
Frame = +3
Query: 258 LLDCGWDEKFDMVFIKELKRHVNSIDAVLISHSDPLHLGALP---YAVGKLGLSCPIYAT 428
L++CGWD++F +K + R +D +LI++ +G P + K G PI
Sbjct: 110 LINCGWDDQFRTEDVKNVLRVCEYVDLLLITNHGLNFVGCAPLLFQELQKRGRKIPIICH 169
Query: 429 LPVYKMGQMFMYDLYQAHKNVSEFDLFTLDD----VDMAFDRIVQLKYNQ 566
V + + ++ + + F F D+ V+ F + L++ +
Sbjct: 170 EYVKSYSKYVLLSYFKCTSSCNFFKSFKDDEYVKMVNELFYNVTSLEFRE 219
>UniRef50_A0D1M0 Cluster: Chromosome undetermined scaffold_34, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_34,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 747
Score = 33.1 bits (72), Expect = 5.8
Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 13/143 (9%)
Frame = +3
Query: 246 EFKFLLDCGWDEKFDMVFIKELKRHVNSIDAVLISHSDPLHLGALPYAVGKLGLSCPIYA 425
+ + +LDCG +++ + IK + VL+S + G LP + + + +
Sbjct: 29 KLQIMLDCGLNQRLECNHIKHYMNKIQKSKLVLLSQPSIEYAGGLP-LISEFQIK--TLS 85
Query: 426 TLPVYKMGQMFMYD----LYQA--HKNVSEFDL-----FTLDDVDMAFDRIVQLKYNQSI 572
T P+ + G D L QA K + E D LD D A+ +I LK+ Q+
Sbjct: 86 TSPIIEFGVRNFVDQLIHLQQAFLKKEIMEEDFKQDWKRILDAADDAYRQIKPLKFGQNE 145
Query: 573 EMK-GKGL-GLRITPLPAGHSLG 635
M GL + + P+ AG +G
Sbjct: 146 TMMFENGLFQVTVCPIRAGKVIG 168
>UniRef50_Q5V0H4 Cluster: MRNA 3'-end processing factor; n=4;
Halobacteriaceae|Rep: MRNA 3'-end processing factor -
Haloarcula marismortui (Halobacterium marismortui)
Length = 411
Score = 33.1 bits (72), Expect = 5.8
Identities = 28/103 (27%), Positives = 41/103 (39%)
Frame = +3
Query: 327 SIDAVLISHSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFDL 506
S DAV++SH H+G +P V PI+ T P Y++ D + H
Sbjct: 43 SPDAVVVSHGHLDHVGTIPALVSG-DARPPIHWTPPTYELAMTLARDTLKLHGGTVNCP- 100
Query: 507 FTLDDVDMAFDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
FT +V R+ Q+ + G +T AGH G
Sbjct: 101 FTETNV----RRVTQVSETHGYRESFEAAGYEVTFYNAGHIPG 139
>UniRef50_A0RY50 Cluster: Exonuclease of the beta-lactamase fold;
n=1; Cenarchaeum symbiosum|Rep: Exonuclease of the
beta-lactamase fold - Cenarchaeum symbiosum
Length = 417
Score = 33.1 bits (72), Expect = 5.8
Identities = 16/59 (27%), Positives = 32/59 (54%)
Frame = +3
Query: 330 IDAVLISHSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFDL 506
+D+++I+H+ H G +P + + YAT P ++ ++ + D+ + NV FDL
Sbjct: 48 VDSIIITHAHLDHSGNVPSMY--ISGNVDTYATAPTLELSKLLIEDMLKIKSNVHIFDL 104
>UniRef50_Q57626 Cluster: Uncharacterized protein MJ0162; n=6;
Methanococcales|Rep: Uncharacterized protein MJ0162 -
Methanococcus jannaschii
Length = 421
Score = 33.1 bits (72), Expect = 5.8
Identities = 36/153 (23%), Positives = 67/153 (43%)
Frame = +3
Query: 177 IIKLHCLSGAGEETPPCYVLQIDEFKFLLDCGWDEKFDMVFIKELKRHVNSIDAVLISHS 356
++K H G + C ++ + + LLDCG + K ++DAV++SH+
Sbjct: 3 LLKFH--GGCQQIGMSCVEVETQKGRVLLDCGMSPDTGEI----PKVDDKAVDAVIVSHA 56
Query: 357 DPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFDLFTLDDVDMAF 536
H GA+P+ K IY T P + M+ ++ N+++ + +D+ A
Sbjct: 57 HLDHCGAIPFYKFK-----KIYCTHPTADL----MFITWRDTLNLTK--AYKEEDIQHAM 105
Query: 537 DRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
+ I L Y + ++ ++ AGH LG
Sbjct: 106 ENIECLNYYEERQITE---NIKFKFYNAGHILG 135
>UniRef50_Q8EQ13 Cluster: Hypothetical conserved protein; n=1;
Oceanobacillus iheyensis|Rep: Hypothetical conserved
protein - Oceanobacillus iheyensis
Length = 207
Score = 32.7 bits (71), Expect = 7.6
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = +3
Query: 225 CYVLQIDEFKFLLDCGWDEKFDMVFIKELKRHVNSIDAVLISHSDPLHLGAL 380
CY+L+ ++D G D + + IKE H I+A+L++H+ H+GAL
Sbjct: 15 CYILKKGTNGIIVDPGGDAELILSIIKE---HHLDINAILLTHAHFDHIGAL 63
>UniRef50_Q8DAV3 Cluster: Rec2-related protein; n=2; Vibrio
vulnificus|Rep: Rec2-related protein - Vibrio vulnificus
Length = 749
Score = 32.7 bits (71), Expect = 7.6
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +3
Query: 309 LKRHVNSIDAVLISHSDPLHLGALPY 386
L R S+D V+ISH D H G LPY
Sbjct: 541 LSRGSRSLDGVIISHQDDDHAGGLPY 566
>UniRef50_Q182G4 Cluster: Metallo beta-lactamase superfamily
lipoprotein; n=2; Clostridium difficile|Rep: Metallo
beta-lactamase superfamily lipoprotein - Clostridium
difficile (strain 630)
Length = 278
Score = 32.7 bits (71), Expect = 7.6
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Frame = +3
Query: 174 SIIKLHCLS-GAGEETPPCYVLQIDEFKFLLDCGWDEKFDMVFIKELK-RHVNSIDAVLI 347
S++ +H + G G+ ++Q K +L G DE + + I L+ + + +ID ++
Sbjct: 23 SLLSIHMIDVGQGDSI----LVQTPTNKNILIDGGDEDSENIIISYLRQKRIKTIDIIIA 78
Query: 348 SHSDPLHLGALPYAVGKLGLS 410
+H D H+G+L + K ++
Sbjct: 79 THPDSDHIGSLDNIIKKFNVN 99
>UniRef50_Q54SH0 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 712
Score = 32.7 bits (71), Expect = 7.6
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 180 IKLHCLSGAGEETPPCYVLQIDEFKFLLDC 269
+K+HCLS + + PC++L+ K LLDC
Sbjct: 1 MKVHCLSQSAQS--PCFLLEYKNVKILLDC 28
Score = 32.7 bits (71), Expect = 7.6
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = +3
Query: 324 NSIDAVLISHSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVS 494
++ID +LIS+ ++ ALP+ IYAT P ++G++ + +L Q K S
Sbjct: 115 STIDMILISNYTNIY--ALPFITEYTNFQGKIYATEPTVQIGKLLLEELVQMDKQYS 169
>UniRef50_A2QCH2 Cluster: Putative uncharacterized protein; n=1;
Aspergillus niger|Rep: Putative uncharacterized protein
- Aspergillus niger
Length = 512
Score = 32.7 bits (71), Expect = 7.6
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = -2
Query: 472 YKSYMNI-CP-ILYTGRVAYIGQLRPSFPTAYGRAPKCRGSECDISTASIEFTCLLSSLM 299
++SY+ C IL TGR A++G +RP+ T + RGS D +T +C S+++
Sbjct: 61 FRSYLGAPCSFILLTGRTAWMGAVRPNLGTTADKDGGRRGSLWDCTTDLRRISCRDSAVL 120
>UniRef50_O29680 Cluster: Putative uncharacterized protein; n=1;
Archaeoglobus fulgidus|Rep: Putative uncharacterized
protein - Archaeoglobus fulgidus
Length = 209
Score = 32.7 bits (71), Expect = 7.6
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = +3
Query: 225 CYVLQIDEFKFLLDCGWDEKFDMVFIKELKRHVN--SIDAVLISHSDPLHLGALPYAVG 395
CY+L +DE K L+D G D +F + LKR+++ +D ++++HS H A + G
Sbjct: 15 CYLL-LDEKKALIDVGGDIQF---ILNALKRYIDPRELDYIILTHSHYDHAAAAGHFKG 69
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 634,667,529
Number of Sequences: 1657284
Number of extensions: 12723549
Number of successful extensions: 30104
Number of sequences better than 10.0: 209
Number of HSP's better than 10.0 without gapping: 29082
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30000
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47296372782
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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