Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10h04f
         (635 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    26   0.23 
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   2.1  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   2.8  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    21   6.5  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   6.5  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   6.5  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   8.6  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   8.6  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   8.6  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 26.2 bits (55), Expect = 0.23
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
 Frame = +1

Query: 214 KLLRAMCSK*MNSNSSWIADGTRNSIW---FSLKNLK 315
           KLL A+C      NSS   +G R  +W   F ++ LK
Sbjct: 30  KLLDALCQSFRKQNSSSCGNGNRCDLWSEKFPIQELK 66


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 12/45 (26%), Positives = 24/45 (53%)
 Frame = -3

Query: 261 GGI*IHLFGAHSTEEFPHQHQISNVI*LLKSFCTIIW*FTAYYNY 127
           G + I+L+  +   +   ++   +++ L+  FC  I+ FT YY Y
Sbjct: 116 GKLLINLYTINYNFKESERNDYVSLLQLVFVFCYFIYLFTVYYIY 160


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -2

Query: 289 SNFSSHPQSRRNLNSSIWST*HGGVSS 209
           S +S HP      N+   +T HGG+ S
Sbjct: 155 SVYSRHPYESWPFNTMSGATHHGGIKS 181


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 6/12 (50%), Positives = 6/12 (50%)
 Frame = +2

Query: 599 PHYTTPSWPFPW 634
           P    P WPF W
Sbjct: 74  PRLGHPQWPFAW 85


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +1

Query: 379 FHMQLENSVLAV 414
           FHM LEN+V+ +
Sbjct: 332 FHMDLENNVIII 343


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = +3

Query: 471 YQAHKNVSEFDLFTLDDVDMAFDRIVQLKYN 563
           Y+  +N+ E     L+D+D+A++ I  L +N
Sbjct: 157 YETFQNLPE-----LEDLDLAYNSISSLDFN 182


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 11/37 (29%), Positives = 15/37 (40%)
 Frame = -3

Query: 600 GDLDLFLSFQCSDCISTVRFCQKPYQHHPV*TNRTRT 490
           G + +F  F  +  I       K   HHPV    T+T
Sbjct: 240 GSILIFFIFPLAILIIVYILIAKTLMHHPVAMTGTKT 276


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +2

Query: 596 SPHYTTPSWP 625
           SPHY TP+ P
Sbjct: 414 SPHYVTPTPP 423


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -3

Query: 111 CRYGSDCSIRM 79
           C+YG++C I M
Sbjct: 224 CKYGNNCEIDM 234


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,582
Number of Sequences: 336
Number of extensions: 3579
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)