Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10h04f
         (635 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF026215-4|AAB71322.1|  843|Caenorhabditis elegans Hypothetical ...   203   7e-53
Z48334-7|CAB54223.2|  608|Caenorhabditis elegans Hypothetical pr...    55   4e-08
AL132951-1|CAC44310.2|  707|Caenorhabditis elegans Hypothetical ...    50   1e-06
U39742-2|AAM51521.1|  321|Caenorhabditis elegans Hypothetical pr...    31   0.91 
U97005-10|AAK72084.1|  646|Caenorhabditis elegans Hypothetical p...    29   2.8  
Z81491-7|CAI46570.1|  184|Caenorhabditis elegans Hypothetical pr...    27   8.5  
Z80219-2|CAB02298.1|  317|Caenorhabditis elegans Hypothetical pr...    27   8.5  
Z66565-5|CAA91482.2|  766|Caenorhabditis elegans Hypothetical pr...    27   8.5  
AL132862-11|CAB60541.1|  396|Caenorhabditis elegans Hypothetical...    27   8.5  

>AF026215-4|AAB71322.1|  843|Caenorhabditis elegans Hypothetical
           protein F09G2.4 protein.
          Length = 843

 Score =  203 bits (496), Expect = 7e-53
 Identities = 92/156 (58%), Positives = 117/156 (75%)
 Frame = +3

Query: 168 MTSIIKLHCLSGAGEETPPCYVLQIDEFKFLLDCGWDEKFDMVFIKELKRHVNSIDAVLI 347
           MTSIIKL   SGA +E P CY+LQ+D    LLDCGWDE+F + + +ELK  +  I AVLI
Sbjct: 1   MTSIIKLKVFSGAKDEGPLCYLLQVDGDYILLDCGWDERFGLQYFEELKPFIPKISAVLI 60

Query: 348 SHSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFDLFTLDDVD 527
           SH DPLHLG LPY V K GL+ P+YAT+PVYKMGQMF+YD+  +H +V EF+ +TLDDVD
Sbjct: 61  SHPDPLHLGGLPYLVSKCGLTAPVYATVPVYKMGQMFIYDMVYSHLDVEEFEHYTLDDVD 120

Query: 528 MAFDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
            AF+++ Q+KYNQ++ +KG   G+  T LPAGH LG
Sbjct: 121 TAFEKVEQVKYNQTVVLKGDS-GVHFTALPAGHMLG 155


>Z48334-7|CAB54223.2|  608|Caenorhabditis elegans Hypothetical
           protein F10B5.8 protein.
          Length = 608

 Score = 55.2 bits (127), Expect = 4e-08
 Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
 Frame = +3

Query: 201 GAGEETP-PCYVLQIDEFKFLLDCGW------DEKF-DMVFIKELKRHVNSIDAVLISHS 356
           GAG++    C ++ I     ++DCG       D +F D  +I    R  + +D V+ISH 
Sbjct: 14  GAGQDVGRSCILITIGGKNIMVDCGMHMGYQDDRRFPDFSYIGGGGRLTDYLDCVIISHF 73

Query: 357 DPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNV-SEFDLFTLDDVDMA 533
              H G+LP+    +G   PIY T P   +  + + D  +   ++  E + FT DD+   
Sbjct: 74  HLDHCGSLPHMSEIVGYDGPIYMTYPTKAICPVLLEDYRKVQCDIKGETNFFTSDDIKNC 133

Query: 534 FDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
             ++V    ++ I +  +   L I    AGH LG
Sbjct: 134 MKKVVGCALHEIIHVDNE---LSIRAFYAGHVLG 164


>AL132951-1|CAC44310.2|  707|Caenorhabditis elegans Hypothetical
           protein Y67H2A.1 protein.
          Length = 707

 Score = 50.0 bits (114), Expect = 1e-06
 Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 7/152 (4%)
 Frame = +3

Query: 201 GAGEETP-PCYVLQIDEFKFLLDCGWDEKFDMV----FIKELKRHVNSIDAVLISHSDPL 365
           G+G+E    C++L+    + +LDCG       V    F+  ++  + +ID +LI+H    
Sbjct: 17  GSGQEVGRSCHLLEYKGKRVMLDCGVHPGLHGVDALPFVDFVE--IENIDLLLITHFHLD 74

Query: 366 HLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHK--NVSEFDLFTLDDVDMAFD 539
           H GALP+ + K       + T     + +M + D  +  K        L+T DD++ +  
Sbjct: 75  HCGALPWLLQKTAFQGKCFMTHATKAIYRMLLGDYVRISKYGGPDRNQLYTEDDLEKSMA 134

Query: 540 RIVQLKYNQSIEMKGKGLGLRITPLPAGHSLG 635
           +I  + + +  E+     G+R  P  AGH LG
Sbjct: 135 KIETIDFREQKEVN----GIRFWPYVAGHVLG 162


>U39742-2|AAM51521.1|  321|Caenorhabditis elegans Hypothetical
           protein C25F6.7b protein.
          Length = 321

 Score = 30.7 bits (66), Expect = 0.91
 Identities = 17/63 (26%), Positives = 27/63 (42%)
 Frame = +3

Query: 195 LSGAGEETPPCYVLQIDEFKFLLDCGWDEKFDMVFIKELKRHVNSIDAVLISHSDPLHLG 374
           + G  E+TP   V + DE K + +CGW       F +  ++  +S   + I    P  L 
Sbjct: 31  VEGVKEDTPKVVVCEADEEKHISNCGWVPMEGGNFDRPKEKRSSSFGPLSIIRLSPSPLA 90

Query: 375 ALP 383
             P
Sbjct: 91  RTP 93


>U97005-10|AAK72084.1|  646|Caenorhabditis elegans Hypothetical
           protein F19F10.12 protein.
          Length = 646

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 16/52 (30%), Positives = 31/52 (59%)
 Frame = +3

Query: 321 VNSIDAVLISHSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQ 476
           +++IDA+L+S+ +   +G LP+     G S  IY T   Y+ G++ M ++ +
Sbjct: 87  MDTIDAILVSNYESF-VG-LPFYTEGSGFSGKIYVTEIAYQYGKLLMEEMLE 136


>Z81491-7|CAI46570.1|  184|Caenorhabditis elegans Hypothetical
           protein D1086.11 protein.
          Length = 184

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +1

Query: 436 YTKWGRCSCTIYTKPIRMCPSSICSHW 516
           Y  W +  C I ++ IR     +C HW
Sbjct: 154 YVSWYKAKCGIPSQIIRNPTEKVCEHW 180


>Z80219-2|CAB02298.1|  317|Caenorhabditis elegans Hypothetical
           protein T01H8.2 protein.
          Length = 317

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = +3

Query: 342 LISHSDPLHLGALPYAVGKLGLSCPIYA--TLPVYKMGQMFMYD 467
           +I+HS   H  AL +A  K+GL C I      P+ K+  M  Y+
Sbjct: 75  MIAHSSGNHGQALAWAAQKIGLPCTIVVPKNAPISKIEGMREYN 118


>Z66565-5|CAA91482.2|  766|Caenorhabditis elegans Hypothetical
           protein T04F8.6 protein.
          Length = 766

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 12/40 (30%), Positives = 24/40 (60%)
 Frame = +3

Query: 423 ATLPVYKMGQMFMYDLYQAHKNVSEFDLFTLDDVDMAFDR 542
           ++L +    ++  YD++   ++ SE DL +L DV+  FD+
Sbjct: 101 SSLGIKDTQRLTRYDVHTICESTSELDLLSLGDVNGIFDK 140


>AL132862-11|CAB60541.1|  396|Caenorhabditis elegans Hypothetical
           protein Y73F8A.16 protein.
          Length = 396

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 18/75 (24%), Positives = 32/75 (42%)
 Frame = +3

Query: 216 TPPCYVLQIDEFKFLLDCGWDEKFDMVFIKELKRHVNSIDAVLISHSDPLHLGALPYAVG 395
           TPP YV Q       +   +D K     + +  ++++S+    I+  + +H  A  Y V 
Sbjct: 270 TPPIYVQQFTALFDEIHNQFDPKTKQNRVAKNVQYLSSVPQFAINQKENIHQNAPDYPVS 329

Query: 396 KLGLSCPIYATLPVY 440
           +     P Y + P Y
Sbjct: 330 QFPNQYP-YGSYPYY 343


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,932,860
Number of Sequences: 27780
Number of extensions: 319405
Number of successful extensions: 879
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 877
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)