BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV10g24r (685 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 66 3e-13 AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 24 1.2 AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 24 1.2 EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 23 2.1 AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 23 2.1 AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 22 4.7 AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 22 4.7 AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 22 4.7 AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 22 4.7 AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 22 4.7 AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 22 4.7 AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 22 4.7 AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 22 4.7 DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 22 6.3 AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 6.3 AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 6.3 AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 6.3 AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 22 6.3 AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 6.3 AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 6.3 AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 6.3 AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 6.3 AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 22 6.3 AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier... 21 8.3 AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 8.3 AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 21 8.3 AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 21 8.3 AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 21 8.3 >AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor protein. Length = 405 Score = 66.1 bits (154), Expect = 3e-13 Identities = 64/224 (28%), Positives = 94/224 (41%), Gaps = 8/224 (3%) Frame = -1 Query: 685 EQSTLVEPTIIHSDWGLTAAHC----TATRVTIVIRA---GTVNMTRPAVVFETTDYLNH 527 E + TII + LTAAHC T++ IV+ + T V+ + H Sbjct: 183 EPGMICGATIISKRYVLTAAHCIIDENTTKLAIVVGEHDWSSKTETNATVLHSINKVIIH 242 Query: 526 PLYDESIQQIVQPHDIGLIKFGRSLVFNDYVQPIRLQSSYHKDYNYDGYRLTATGWGRTW 347 P YD + Q +DI L+K + + F D V P L + D ++ G +T GWG T Sbjct: 243 PKYDIIEKDDWQINDIALLKTEKDIKFGDKVGPACLPFQHFLD-SFAGSDVTVLGWGHTS 301 Query: 346 TNGTAPENMNWVFLRGVTNAFCSEIFVINNIVQDSTICASGYNVTSQSTCQGDSGGG-LT 170 NG + L +T C + + NI+ ++ +CA + CQ DSGG L Sbjct: 302 FNGMLSHILQKTTLNMLTQVECYKYY--GNIMVNA-MCA---YAKGKDACQMDSGGPVLW 355 Query: 169 XXXXXXXXXXXGISSFVSSTGCHTDYPAGFIRPGHYHDWYLEVT 38 GI S+ + G YP G + G Y DW + T Sbjct: 356 QNPRTKRLVNIGIISWGAECG---KYPNGNTKVGSYIDWIVSQT 396 >AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase protein. Length = 492 Score = 24.2 bits (50), Expect = 1.2 Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 2/26 (7%) Frame = +1 Query: 313 PNSYFQERYHWSRFFPNR--WQSDGN 384 PNS +QERY + FP W + N Sbjct: 96 PNSCYQERYEYFPGFPGEEMWNPNTN 121 >AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase protein. Length = 628 Score = 24.2 bits (50), Expect = 1.2 Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 2/26 (7%) Frame = +1 Query: 313 PNSYFQERYHWSRFFPNR--WQSDGN 384 PNS +QERY + FP W + N Sbjct: 96 PNSCYQERYEYFPGFPGEEMWNPNTN 121 >EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase protein. Length = 620 Score = 23.4 bits (48), Expect = 2.1 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = -3 Query: 326 KYELGLPSRCDQRVLLRNFRN 264 K ELG PSR ++ L R F N Sbjct: 538 KDELGKPSRISKQGLFRRFYN 558 >AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex determiner protein. Length = 406 Score = 23.4 bits (48), Expect = 2.1 Identities = 14/45 (31%), Positives = 21/45 (46%) Frame = -3 Query: 680 VNACGAHHHPQRLGTHGCSLHCYSRNHSHQSRYSQHDTARRCFRD 546 VN + + ++ T SL +R H Q S++ RRC RD Sbjct: 198 VNIKKSGNESKKYATSSNSLR--NRTHDFQHTSSRYSRERRCSRD 240 >AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex determiner protein. Length = 400 Score = 22.2 bits (45), Expect = 4.7 Identities = 14/45 (31%), Positives = 20/45 (44%) Frame = -3 Query: 680 VNACGAHHHPQRLGTHGCSLHCYSRNHSHQSRYSQHDTARRCFRD 546 VN + + ++ T SL SR H Q S++ R C RD Sbjct: 187 VNIKKSGNESKKYATSSNSLR--SRTHGFQHTSSRYSRERSCSRD 229 >AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex determiner protein. Length = 397 Score = 22.2 bits (45), Expect = 4.7 Identities = 14/45 (31%), Positives = 20/45 (44%) Frame = -3 Query: 680 VNACGAHHHPQRLGTHGCSLHCYSRNHSHQSRYSQHDTARRCFRD 546 VN + + ++ T SL SR H Q S++ R C RD Sbjct: 187 VNIKKSGNESKKYATSSNSLR--SRTHGFQHTSSRYSRERSCSRD 229 >AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex determiner protein. Length = 406 Score = 22.2 bits (45), Expect = 4.7 Identities = 14/45 (31%), Positives = 20/45 (44%) Frame = -3 Query: 680 VNACGAHHHPQRLGTHGCSLHCYSRNHSHQSRYSQHDTARRCFRD 546 VN + + ++ T SL SR H Q S++ R C RD Sbjct: 198 VNIKKSGNESKKYATSSNSLR--SRTHGFQHTSSRYSRERSCSRD 240 >AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 22.2 bits (45), Expect = 4.7 Identities = 14/45 (31%), Positives = 20/45 (44%) Frame = -3 Query: 680 VNACGAHHHPQRLGTHGCSLHCYSRNHSHQSRYSQHDTARRCFRD 546 VN + + ++ T SL SR H Q S++ R C RD Sbjct: 198 VNIKKSGNESKKYATSSNSLR--SRTHGFQHTSSRYSRERSCSRD 240 >AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex determiner protein. Length = 426 Score = 22.2 bits (45), Expect = 4.7 Identities = 14/45 (31%), Positives = 20/45 (44%) Frame = -3 Query: 680 VNACGAHHHPQRLGTHGCSLHCYSRNHSHQSRYSQHDTARRCFRD 546 VN + + ++ T SL SR H Q S++ R C RD Sbjct: 198 VNIKKSGNESKKYATSSNSLR--SRTHGFQHTSSRYSRERSCSRD 240 >AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex determiner protein. Length = 407 Score = 22.2 bits (45), Expect = 4.7 Identities = 14/45 (31%), Positives = 20/45 (44%) Frame = -3 Query: 680 VNACGAHHHPQRLGTHGCSLHCYSRNHSHQSRYSQHDTARRCFRD 546 VN + + ++ T SL SR H Q S++ R C RD Sbjct: 198 VNIKKSGNESKKYATSSNSLR--SRTHGFQHTSSRYSRERSCSRD 240 >AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex determiner protein. Length = 425 Score = 22.2 bits (45), Expect = 4.7 Identities = 14/45 (31%), Positives = 20/45 (44%) Frame = -3 Query: 680 VNACGAHHHPQRLGTHGCSLHCYSRNHSHQSRYSQHDTARRCFRD 546 VN + + ++ T SL SR H Q S++ R C RD Sbjct: 198 VNIKKSGNESKKYATSSNSLR--SRTHGFQHTSSRYSRERSCSRD 240 >AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly protein MRJP5 protein. Length = 598 Score = 22.2 bits (45), Expect = 4.7 Identities = 12/32 (37%), Positives = 16/32 (50%) Frame = -3 Query: 572 DTARRCFRDDRLFKPPTLRRIDTADCTTSRHR 477 DT R R DR+ + + R+DT D T R Sbjct: 481 DTMDRMDRMDRMDRMDRMDRMDTMDRTDKMSR 512 >DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated ion channel subunit protein. Length = 391 Score = 21.8 bits (44), Expect = 6.3 Identities = 10/27 (37%), Positives = 15/27 (55%) Frame = +3 Query: 528 WFK*SVVSKTTAGRVMLTVPALMTMVT 608 WF + GRV L V +++T+VT Sbjct: 218 WFSFWLGLDAIPGRVALLVTSMLTLVT 244 >AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 21.8 bits (44), Expect = 6.3 Identities = 14/45 (31%), Positives = 19/45 (42%) Frame = -3 Query: 680 VNACGAHHHPQRLGTHGCSLHCYSRNHSHQSRYSQHDTARRCFRD 546 VN + + ++ T SL SR H Q S + R C RD Sbjct: 198 VNIKKSGNESKKYATSSNSLR--SRTHGFQHTSSHYSRERSCSRD 240 >AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 21.8 bits (44), Expect = 6.3 Identities = 14/45 (31%), Positives = 19/45 (42%) Frame = -3 Query: 680 VNACGAHHHPQRLGTHGCSLHCYSRNHSHQSRYSQHDTARRCFRD 546 VN + + ++ T SL SR H Q S + R C RD Sbjct: 198 VNIKKSGNESKKYATSSNSLR--SRTHGFQHTSSHYSRERSCSRD 240 >AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 21.8 bits (44), Expect = 6.3 Identities = 14/45 (31%), Positives = 19/45 (42%) Frame = -3 Query: 680 VNACGAHHHPQRLGTHGCSLHCYSRNHSHQSRYSQHDTARRCFRD 546 VN + + ++ T SL SR H Q S + R C RD Sbjct: 198 VNIKKSGNESKKYATSSNSLR--SRTHGFQHTSSHYSRERSCSRD 240 >AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 21.8 bits (44), Expect = 6.3 Identities = 14/45 (31%), Positives = 19/45 (42%) Frame = -3 Query: 680 VNACGAHHHPQRLGTHGCSLHCYSRNHSHQSRYSQHDTARRCFRD 546 VN + + ++ T SL SR H Q S + R C RD Sbjct: 198 VNIKKSGNESKKYATSSNSLR--SRTHGFQHTSSHYSRERSCSRD 240 >AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex determiner protein. Length = 397 Score = 21.8 bits (44), Expect = 6.3 Identities = 14/45 (31%), Positives = 19/45 (42%) Frame = -3 Query: 680 VNACGAHHHPQRLGTHGCSLHCYSRNHSHQSRYSQHDTARRCFRD 546 VN + + ++ T SL SR H Q S + R C RD Sbjct: 187 VNIKKSGNESKKYATSSNSLR--SRTHGFQHTSSHYSRERSCSRD 229 >AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex determiner protein. Length = 419 Score = 21.8 bits (44), Expect = 6.3 Identities = 14/45 (31%), Positives = 19/45 (42%) Frame = -3 Query: 680 VNACGAHHHPQRLGTHGCSLHCYSRNHSHQSRYSQHDTARRCFRD 546 VN + + ++ T SL SR H Q S + R C RD Sbjct: 198 VNIKKSGNESKKYATSSNSLR--SRTHGFQHTSSHYSRERSCSRD 240 >AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex determiner protein. Length = 414 Score = 21.8 bits (44), Expect = 6.3 Identities = 9/22 (40%), Positives = 11/22 (50%) Frame = -3 Query: 611 SRNHSHQSRYSQHDTARRCFRD 546 SR H Q S++ R C RD Sbjct: 219 SRTHGFQHTSSRYSRERSCSRD 240 >AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex determiner protein. Length = 414 Score = 21.8 bits (44), Expect = 6.3 Identities = 9/22 (40%), Positives = 11/22 (50%) Frame = -3 Query: 611 SRNHSHQSRYSQHDTARRCFRD 546 SR H Q S++ R C RD Sbjct: 219 SRTHGFQHTSSRYSRERSCSRD 240 >AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex determiner protein. Length = 428 Score = 21.8 bits (44), Expect = 6.3 Identities = 9/22 (40%), Positives = 11/22 (50%) Frame = -3 Query: 611 SRNHSHQSRYSQHDTARRCFRD 546 SR H Q S++ R C RD Sbjct: 219 SRTHDFQHTSSRYSRERSCSRD 240 >AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier protein JHBP-1 protein. Length = 253 Score = 21.4 bits (43), Expect = 8.3 Identities = 6/14 (42%), Positives = 9/14 (64%) Frame = +1 Query: 211 WSRCILKRRWWNPE 252 W +CIL +NP+ Sbjct: 111 WDKCILSSESYNPQ 124 >AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. Length = 1946 Score = 21.4 bits (43), Expect = 8.3 Identities = 13/31 (41%), Positives = 16/31 (51%) Frame = -1 Query: 295 TNAFCSEIFVINNIVQDSTICASGYNVTSQS 203 TNAF S+ IN IVQ+ G V +S Sbjct: 858 TNAFGSDDTSINMIVQEVPEVPYGLKVLDKS 888 >AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex determiner protein. Length = 400 Score = 21.4 bits (43), Expect = 8.3 Identities = 13/45 (28%), Positives = 20/45 (44%) Frame = -3 Query: 680 VNACGAHHHPQRLGTHGCSLHCYSRNHSHQSRYSQHDTARRCFRD 546 VN + + ++ T SL +R H Q S++ R C RD Sbjct: 187 VNIEKSENESKKYATSSNSLR--NRTHGFQHTSSRYSRERSCSRD 229 >AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic acetylcholine receptorApisa2 subunit protein. Length = 541 Score = 21.4 bits (43), Expect = 8.3 Identities = 11/39 (28%), Positives = 19/39 (48%) Frame = +3 Query: 564 GRVMLTVPALMTMVTRVAVQ*AAVSPQSLWMMVGSTSVD 680 G+V+ T PA+ + V+ Q+ +M GS + D Sbjct: 131 GKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYD 169 >AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase protein. Length = 588 Score = 21.4 bits (43), Expect = 8.3 Identities = 8/18 (44%), Positives = 10/18 (55%) Frame = +1 Query: 286 TRWSHLEGRPNSYFQERY 339 T W+ EGR YF + Y Sbjct: 178 TGWTFHEGRKQFYFHQFY 195 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 185,279 Number of Sequences: 438 Number of extensions: 4154 Number of successful extensions: 44 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 39 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 42 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 20830365 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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