Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10g22f
         (661 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0MTA5 Cluster: HMG176; n=1; Helicoverpa armigera|Rep: ...    55   1e-06
UniRef50_Q0BQG8 Cluster: CDP-diacylglycerol--glycerol-3-phosphat...    34   3.5  
UniRef50_A7GWF3 Cluster: 2-hydroxyglutaryl-CoA dehydratase, D-co...    33   4.6  
UniRef50_Q0A715 Cluster: TonB-dependent receptor, plug precursor...    33   6.1  

>UniRef50_Q0MTA5 Cluster: HMG176; n=1; Helicoverpa armigera|Rep:
           HMG176 - Helicoverpa armigera (Cotton bollworm)
           (Heliothis armigera)
          Length = 176

 Score = 55.2 bits (127), Expect = 1e-06
 Identities = 30/90 (33%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
 Frame = +1

Query: 175 LSIGTIASNDRLLRSFSVTRGVTATS-QIVDLRYTAPNSMRIRAIRVRQVGASQFATXXX 351
           +S+G I ++DRLL + + +R   A   Q V++RYT  +S+ I A+R    G+ Q AT   
Sbjct: 76  MSLGNIGASDRLLSASTHSRNPIANQVQTVNVRYTGSSSIIILAVRA--YGSGQGATARV 133

Query: 352 XXXXXXWNTVTLRFINSPRRGFNFNVQIWG 441
                  N++T++  ++  RGF++ ++IWG
Sbjct: 134 VEGYLGRNSITIQLQSARGRGFHYRIEIWG 163


>UniRef50_Q0BQG8 Cluster: CDP-diacylglycerol--glycerol-3-phosphate
           3-phosphatidyltransferase; n=1; Granulibacter
           bethesdensis CGDNIH1|Rep:
           CDP-diacylglycerol--glycerol-3-phosphate
           3-phosphatidyltransferase - Granulobacter bethesdensis
           (strain ATCC BAA-1260 / CGDNIH1)
          Length = 204

 Score = 33.9 bits (74), Expect = 3.5
 Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
 Frame = -3

Query: 290 ILLGAVYLKSTICE-VAVTPRVTEKLRNSLSFEAIVPMLKTRALLVELGSATSLVDTATT 114
           ++LG + + +TI + VA++P    KL  +L    +  +L T A         SLV    T
Sbjct: 123 LILGGIVVLTTIGQDVAISPLYVSKLNTTLQIILVAFLLATAAFAPP---EASLVAATNT 179

Query: 113 AVNTNKRANFITS*CRFVWIPCHHR 39
            +      + + S   +VW+ CH R
Sbjct: 180 ILVVLVALSTLASGAAYVWMACHPR 204


>UniRef50_A7GWF3 Cluster: 2-hydroxyglutaryl-CoA dehydratase,
           D-component; n=2; Campylobacter|Rep:
           2-hydroxyglutaryl-CoA dehydratase, D-component -
           Campylobacter curvus 525.92
          Length = 385

 Score = 33.5 bits (73), Expect = 4.6
 Identities = 20/57 (35%), Positives = 28/57 (49%)
 Frame = +3

Query: 369 LEHRHSSVHKLTAQRI*L*CTDLGMLRLICPPIQKKAYRLFALCKCTISKNIRN*FN 539
           +++  S+VHK   + I   C   GM   I PPI++    + A   CT SKN  N  N
Sbjct: 231 VKNGESAVHKSAKRIIITGCPSGGMFDKIVPPIEEAGGVVVAFENCTGSKNFSNLIN 287


>UniRef50_Q0A715 Cluster: TonB-dependent receptor, plug precursor;
           n=1; Alkalilimnicola ehrlichei MLHE-1|Rep:
           TonB-dependent receptor, plug precursor -
           Alkalilimnicola ehrlichei (strain MLHE-1)
          Length = 668

 Score = 33.1 bits (72), Expect = 6.1
 Identities = 17/35 (48%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
 Frame = +3

Query: 18  VHLTEFAAVVTR-DPYKTTSAGDEVRSFVRIDRGR 119
           V+ TE    VTR D  +TTS GD ++S++ IDR R
Sbjct: 502 VYRTELKDRVTRADTGETTSQGDPIQSYINIDRSR 536


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 640,436,823
Number of Sequences: 1657284
Number of extensions: 12862589
Number of successful extensions: 33781
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 32605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33771
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50000004659
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)