Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10g22f
         (661 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g53290.1 68414.m06040 galactosyltransferase family protein co...    30   1.2  
At1g33400.1 68414.m04135 tetratricopeptide repeat (TPR)-containi...    30   1.2  
At1g62970.1 68414.m07110 DNAJ heat shock N-terminal domain-conta...    30   1.6  
At5g64360.3 68418.m08085 DNAJ heat shock N-terminal domain-conta...    29   2.1  
At5g64360.2 68418.m08084 DNAJ heat shock N-terminal domain-conta...    29   2.1  
At5g64360.1 68418.m08083 DNAJ heat shock N-terminal domain-conta...    29   2.1  
At5g45720.1 68418.m05621 hypothetical protein                          29   2.7  
At2g26100.1 68415.m03132 galactosyltransferase family protein co...    29   3.6  
At3g11880.1 68416.m01456 expressed protein                             28   4.8  
At3g14960.1 68416.m01892 galactosyltransferase family protein co...    28   6.3  
At5g56870.1 68418.m07097 beta-galactosidase, putative / lactase,...    27   8.4  
At2g02620.1 68415.m00201 DC1 domain-containing protein / PHD fin...    27   8.4  

>At1g53290.1 68414.m06040 galactosyltransferase family protein
           contains Pfam profile: PF01762 galactosyltransferase
           ;contains similarity to Avr9 elicitor response protein
           GI:4138265 from [Nicotiana tabacum]
          Length = 345

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +3

Query: 306 PSPASGSVTVRDCPRCGGRCRLEHRHSSVHK 398
           P  +  SV V D P+C G C  E R   +HK
Sbjct: 300 PECSPSSVAVWDIPKCSGLCNPEKRMLELHK 330


>At1g33400.1 68414.m04135 tetratricopeptide repeat (TPR)-containing
           protein contains Pfam profile PF00515 TPR Domain
          Length = 798

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
 Frame = +3

Query: 309 SPASGSVTVRD--CPRCGGRCRLEHRHSSVHK 398
           S  SGS+ +    C +CG RC +E+ H+ V+K
Sbjct: 620 SKPSGSLHIEPEICLKCGSRCDIENSHAEVNK 651


>At1g62970.1 68414.m07110 DNAJ heat shock N-terminal
           domain-containing protein low similarity to AHM1
           [Triticum aestivum] GI:6691467; contains Pfam profile
           PF00226: DnaJ domain
          Length = 797

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -1

Query: 355 PQRGQSRTVTLPLAGLGWP*CAYCWVLY 272
           P+ G +RT + P     W  C YC+VLY
Sbjct: 629 PKSGAARTDSEPEVSSFWTTCPYCYVLY 656


>At5g64360.3 68418.m08085 DNAJ heat shock N-terminal
           domain-containing protein low similarity to AHM1
           [Triticum aestivum] GI:6691467; contains Pfam profile
           PF00226 DnaJ domain
          Length = 464

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
 Frame = -1

Query: 358 PPQRGQSRTVTL--PLAGLGWP*CAYCWVLY 272
           PP R QS+  T   P+A   W  C YC+VL+
Sbjct: 176 PPPRSQSQAGTSADPMATSFWTACPYCFVLF 206


>At5g64360.2 68418.m08084 DNAJ heat shock N-terminal
           domain-containing protein low similarity to AHM1
           [Triticum aestivum] GI:6691467; contains Pfam profile
           PF00226 DnaJ domain
          Length = 464

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
 Frame = -1

Query: 358 PPQRGQSRTVTL--PLAGLGWP*CAYCWVLY 272
           PP R QS+  T   P+A   W  C YC+VL+
Sbjct: 176 PPPRSQSQAGTSADPMATSFWTACPYCFVLF 206


>At5g64360.1 68418.m08083 DNAJ heat shock N-terminal
           domain-containing protein low similarity to AHM1
           [Triticum aestivum] GI:6691467; contains Pfam profile
           PF00226 DnaJ domain
          Length = 422

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
 Frame = -1

Query: 358 PPQRGQSRTVTL--PLAGLGWP*CAYCWVLY 272
           PP R QS+  T   P+A   W  C YC+VL+
Sbjct: 176 PPPRSQSQAGTSADPMATSFWTACPYCFVLF 206


>At5g45720.1 68418.m05621 hypothetical protein
          Length = 900

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 19/57 (33%), Positives = 28/57 (49%)
 Frame = +1

Query: 370 WNTVTLRFINSPRRGFNFNVQIWGCFG*SVHPSKRKHIVFSHCASVQFPKIFEIDLI 540
           WNT++     +PRR     V +  C    V P    HI+ S C    FPK+ ++D+I
Sbjct: 472 WNTLSKIVDRAPRRV----VFVLVCSSLDVLP----HIIVSRCQKFFFPKLKDVDII 520


>At2g26100.1 68415.m03132 galactosyltransferase family protein
           contains Pfam profile: PF01762 galactosyltransferase
          Length = 371

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +3

Query: 303 HPSPASGSVTVRDCPRCGGRCRLEHRHSSVHK 398
           H SP S  + V D P+C G C  E R   +HK
Sbjct: 325 HCSPKS--IAVWDIPKCSGLCDPESRLKELHK 354


>At3g11880.1 68416.m01456 expressed protein
          Length = 443

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = -3

Query: 236 PRVTEKLRNSLSFEAIVPMLKTRALLVELGS 144
           P  +E+++ +  FEAI P+LK  AL  E GS
Sbjct: 260 PASSERVKATERFEAIYPLLKEVALACEPGS 290


>At3g14960.1 68416.m01892 galactosyltransferase family protein
           contains Pfam profile: PF01762 galactosyltransferase
          Length = 343

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +3

Query: 306 PSPASGSVTVRDCPRCGGRCRLEHRHSSVHKL 401
           P  +  S+ V D P+C G C  E R   +H L
Sbjct: 298 PECSPYSIAVWDIPKCSGLCNPEKRMLELHML 329


>At5g56870.1 68418.m07097 beta-galactosidase, putative / lactase,
           putative similar to beta-galactosidase precursor
           GI:3869280 from [Carica papaya]
          Length = 724

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +3

Query: 231 PWCDSYLADCRLEVYST 281
           PW  S L DC+ EVY+T
Sbjct: 398 PWSVSILPDCKTEVYNT 414


>At2g02620.1 68415.m00201 DC1 domain-containing protein / PHD finger
           protein-related contains Pfam profiles PF03107: DC1
           domain, weak hit to PF00628: PHD-finger
          Length = 513

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
 Frame = +3

Query: 237 CDSYLADCRLEVYS---TQQYAHQGHPSPASGSVTVRDCPRCGGRCRLEHRHSSVHKL 401
           CD    DC L+V     ++ + +QGHP P   ++  ++ P C   C    + + VHKL
Sbjct: 323 CDKEGCDCVLDVVCASVSEPFDYQGHPHPLFLALDPKEKPIC-NIC----KSTKVHKL 375


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,929,803
Number of Sequences: 28952
Number of extensions: 286366
Number of successful extensions: 726
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 725
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1383534864
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)