Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10g20r
         (666 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    22   5.2  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    22   5.2  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    22   5.2  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   9.1  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   9.1  

>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = +3

Query: 543 YHHLASHVDWTVQTSLLIFFKIRNHTIL 626
           Y H+ S +D+ +  +L++ F    HT +
Sbjct: 199 YSHIFSLMDYNIVMALVLQFITLQHTFI 226


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = +3

Query: 543 YHHLASHVDWTVQTSLLIFFKIRNHTIL 626
           Y H+ S +D+ +  +L++ F    HT +
Sbjct: 199 YSHIFSLMDYNIVMALVLQFITLQHTFI 226


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = +3

Query: 543 YHHLASHVDWTVQTSLLIFFKIRNHTIL 626
           Y H+ S +D+ +  +L++ F    HT +
Sbjct: 199 YSHIFSLMDYNIVMALVLQFITLQHTFI 226


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 13/50 (26%), Positives = 23/50 (46%)
 Frame = -2

Query: 200 SNIPI*FAALSSILKRKAKYVTLWTRGEDKQKNMKIGKTVKEKLNINRNI 51
           SNI +  A  ++  +R+  Y  +W  GE  +   K     + K  + R+I
Sbjct: 356 SNIGVKIALEAATTEREGGYHDIWMSGESFKSPYKASCWAQFKAVLWRSI 405


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 13/50 (26%), Positives = 23/50 (46%)
 Frame = -2

Query: 200 SNIPI*FAALSSILKRKAKYVTLWTRGEDKQKNMKIGKTVKEKLNINRNI 51
           SNI +  A  ++  +R+  Y  +W  GE  +   K     + K  + R+I
Sbjct: 356 SNIGVKIALEAATTEREGGYHDIWMSGESFKSPYKASCWAQFKAVLWRSI 405


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,668
Number of Sequences: 336
Number of extensions: 3371
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)