Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10g20f
(648 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF068714-2|AAC17807.1| 248|Caenorhabditis elegans Initiation fa... 114 4e-26
AF068714-3|AAM22022.1| 250|Caenorhabditis elegans Initiation fa... 110 9e-25
AF068714-4|AAK68676.1| 251|Caenorhabditis elegans Initiation fa... 108 3e-24
Z81546-5|CAB04454.2| 212|Caenorhabditis elegans Hypothetical pr... 95 5e-20
U41550-3|AAA83286.1| 228|Caenorhabditis elegans Initiation fact... 93 1e-19
AL117195-24|CAB55035.1| 201|Caenorhabditis elegans Hypothetical... 86 2e-17
AL117195-23|CAB60769.1| 240|Caenorhabditis elegans Hypothetical... 86 2e-17
AF214652-1|AAF62415.1| 201|Caenorhabditis elegans translation i... 86 2e-17
U64605-1|AAF98601.1| 212|Caenorhabditis elegans Initiation fact... 69 2e-12
AF214651-1|AAF62414.1| 212|Caenorhabditis elegans translation i... 69 2e-12
Z81545-8|CAB04444.1| 327|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z98851-5|CAB11541.1| 596|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z98851-4|CAB11542.1| 607|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z69793-6|CAI46593.1| 424|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z69793-5|CAA93673.2| 441|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z81579-1|CAB04655.1| 376|Caenorhabditis elegans Hypothetical pr... 27 8.7
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 27 8.7
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 27 8.7
>AF068714-2|AAC17807.1| 248|Caenorhabditis elegans Initiation
factor 4e (eif4e) familyprotein 3, isoform a protein.
Length = 248
Score = 114 bits (275), Expect = 4e-26
Identities = 61/163 (37%), Positives = 89/163 (54%), Gaps = 4/163 (2%)
Frame = +1
Query: 88 ALSSQHETRDGDTSLQSESSPAIKHPLEHTWSYW-LYTNKSKEWIHNLVELSTFATVEDY 264
ALS+ + D S+ E +HPL++ W+ W L +++KEW L +S F TVED+
Sbjct: 10 ALSASGDVNASDASVPPEL--LTRHPLQNRWALWYLKADRNKEWEDCLKMVSLFDTVEDF 67
Query: 265 WCLYHYMKLPSELNHGQDYMIFKKGIQPTWEDPINEKGGRWIICESKSARNXXXXXXXXX 444
W LY++++ LN G DY +FK+GI+P WED N +GGRW++ K R
Sbjct: 68 WSLYNHIQSAGGLNWGSDYYLFKEGIKPMWEDVNNVQGGRWLVVVDKQRRTQLLDHYWLE 127
Query: 445 XXM--IGENF-EHPDLICGVVVNIKAKSKICDIMDTW*RQTEK 564
M +GE F E+ D ICG VVN++ K D + W R +
Sbjct: 128 LLMAIVGEQFDEYGDYICGAVVNVRQKG---DKVSLWTRDATR 167
Score = 31.5 bits (68), Expect = 0.53
Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Frame = +2
Query: 506 LKRKAKYVTLWTRGEDKQK-NMKIGKTVKEKLNI--NRNISYFNHNTTSA 646
+++K V+LWTR + N++IG+ +K+KL+I + Y H +SA
Sbjct: 151 VRQKGDKVSLWTRDATRDDVNLRIGQVLKQKLSIPDTEILRYEVHKDSSA 200
>AF068714-3|AAM22022.1| 250|Caenorhabditis elegans Initiation
factor 4e (eif4e) familyprotein 3, isoform c protein.
Length = 250
Score = 110 bits (264), Expect = 9e-25
Identities = 59/165 (35%), Positives = 89/165 (53%), Gaps = 6/165 (3%)
Frame = +1
Query: 88 ALSSQHETRDGDTSLQSESSPAIKHPLEHTWSYW-LYTNKSKEWIHNLVELSTFATVEDY 264
ALS+ + D S+ E +HPL++ W+ W L +++KEW L +S F TVED+
Sbjct: 10 ALSASGDVNASDASVPPEL--LTRHPLQNRWALWYLKADRNKEWEDCLKMVSLFDTVEDF 67
Query: 265 WCLYHYMKLPSELNHGQDYMIFKKGIQPTWEDPINEKGGRWIICESKSARNXXXXXXXXX 444
W LY++++ LN G DY +FK+GI+P WED N +GGRW++ K +
Sbjct: 68 WSLYNHIQSAGGLNWGSDYYLFKEGIKPMWEDVNNVQGGRWLVVVDKQLQRRTQLLDHYW 127
Query: 445 XXM----IGENF-EHPDLICGVVVNIKAKSKICDIMDTW*RQTEK 564
+ +GE F E+ D ICG VVN++ K D + W R +
Sbjct: 128 LELLMAIVGEQFDEYGDYICGAVVNVRQKG---DKVSLWTRDATR 169
Score = 31.5 bits (68), Expect = 0.53
Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Frame = +2
Query: 506 LKRKAKYVTLWTRGEDKQK-NMKIGKTVKEKLNI--NRNISYFNHNTTSA 646
+++K V+LWTR + N++IG+ +K+KL+I + Y H +SA
Sbjct: 153 VRQKGDKVSLWTRDATRDDVNLRIGQVLKQKLSIPDTEILRYEVHKDSSA 202
>AF068714-4|AAK68676.1| 251|Caenorhabditis elegans Initiation
factor 4e (eif4e) familyprotein 3, isoform b protein.
Length = 251
Score = 108 bits (260), Expect = 3e-24
Identities = 61/166 (36%), Positives = 89/166 (53%), Gaps = 7/166 (4%)
Frame = +1
Query: 88 ALSSQHETRDGDTSLQSESSPAIKHPLEHTWSYW-LYTNKSKEWIHNLVELSTFATVEDY 264
ALS+ + D S+ E +HPL++ W+ W L +++KEW L +S F TVED+
Sbjct: 10 ALSASGDVNASDASVPPEL--LTRHPLQNRWALWYLKADRNKEWEDCLKMVSLFDTVEDF 67
Query: 265 WCLYHYMKLPSELNHGQDYMIFKKGIQPTWEDPINEKGGRWIICESK---SARNXXXXXX 435
W LY++++ LN G DY +FK+GI+P WED N +GGRW++ K R
Sbjct: 68 WSLYNHIQSAGGLNWGSDYYLFKEGIKPMWEDVNNVQGGRWLVVVDKQKLQRRTQLLDHY 127
Query: 436 XXXXXM--IGENF-EHPDLICGVVVNIKAKSKICDIMDTW*RQTEK 564
M +GE F E+ D ICG VVN++ K D + W R +
Sbjct: 128 WLELLMAIVGEQFDEYGDYICGAVVNVRQKG---DKVSLWTRDATR 170
Score = 31.5 bits (68), Expect = 0.53
Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Frame = +2
Query: 506 LKRKAKYVTLWTRGEDKQK-NMKIGKTVKEKLNI--NRNISYFNHNTTSA 646
+++K V+LWTR + N++IG+ +K+KL+I + Y H +SA
Sbjct: 154 VRQKGDKVSLWTRDATRDDVNLRIGQVLKQKLSIPDTEILRYEVHKDSSA 203
>Z81546-5|CAB04454.2| 212|Caenorhabditis elegans Hypothetical
protein F53A2.6 protein.
Length = 212
Score = 94.7 bits (225), Expect = 5e-20
Identities = 49/136 (36%), Positives = 76/136 (55%), Gaps = 5/136 (3%)
Frame = +1
Query: 133 QSESSPAIKHPLEHTWSYW-LYTNKSKEWIHNLVELSTFATVEDYWCLYHYMKLPSELNH 309
++E + A +PL+ W++W L ++K W L ++ TF TV ++W LY ++ PS LN
Sbjct: 3 ETEQTTAPIYPLKRNWTWWYLNDERNKSWEDRLKKVYTFNTVSEFWALYDAIRPPSGLNA 62
Query: 310 GQDYMIFKKGIQPTWEDPINEKGGRWIIC--ESKSARNXXXXXXXXXXXMIGENF-EHPD 480
DY +F+ IQP WE P N GGRW+I + K+ ++GE F + +
Sbjct: 63 LCDYNVFRDDIQPMWEVPENSNGGRWLIVIDKGKTPEMVDAIWLEILMALVGEQFGKDME 122
Query: 481 LICGVVVNIKAK-SKI 525
ICG+V N++ K SKI
Sbjct: 123 SICGLVCNVRGKGSKI 138
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/32 (37%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +2
Query: 506 LKRKAKYVTLWTRG-EDKQKNMKIGKTVKEKL 598
++ K +++WT+ D + NM+IG +KEKL
Sbjct: 131 VRGKGSKISVWTKDCNDDETNMRIGVVLKEKL 162
>U41550-3|AAA83286.1| 228|Caenorhabditis elegans Initiation factor
4e (eif4e) familyprotein 2 protein.
Length = 228
Score = 93.5 bits (222), Expect = 1e-19
Identities = 48/132 (36%), Positives = 74/132 (56%), Gaps = 8/132 (6%)
Frame = +1
Query: 154 IKHP---LEHTWSYW-LYTNKSKEWIHNLVELSTFATVEDYWCLYHYMKLPSELNHGQDY 321
I HP L+ W++W L ++K W L + TF++V ++W L+ +K PS LN DY
Sbjct: 12 ISHPVYKLKRNWTWWYLNDERNKSWEERLKNVKTFSSVGEFWALHDSIKPPSGLNPPSDY 71
Query: 322 MIFKKGIQPTWEDPINEKGGRWIIC--ESKSARNXXXXXXXXXXXMIGENF-EHPDLICG 492
+F+ GI+P WE P N+ GGRW+I + ++ MIGE F + + +CG
Sbjct: 72 NVFRDGIEPMWEVPQNQNGGRWLITIEKGRTPEIMDTIWTEILMAMIGEQFSDDIESLCG 131
Query: 493 VVVNIKAK-SKI 525
+V N++ K SKI
Sbjct: 132 IVCNVRGKGSKI 143
>AL117195-24|CAB55035.1| 201|Caenorhabditis elegans Hypothetical
protein Y57A10A.30b protein.
Length = 201
Score = 86.2 bits (204), Expect = 2e-17
Identities = 47/127 (37%), Positives = 69/127 (54%), Gaps = 5/127 (3%)
Frame = +1
Query: 160 HPLEHTWSYW-LYTNKSKEWIHNLVELSTFATVEDYWCLYHYMKLPSELNHGQDYMIFKK 336
+PL+ WS+W L +++ W L ++ TF TV ++W Y + PS LN DY +F+
Sbjct: 9 YPLQRNWSWWFLNDDRNASWQDRLKKVYTFNTVPEFWAFYEAILPPSGLNDLCDYNVFRD 68
Query: 337 GIQPTWEDPINEKGGRW--IICESKSARNXXXXXXXXXXXMIGENF-EHPDLICGVVVNI 507
IQP WE P N GGRW II + K+ +IGE F + + ICG+V N+
Sbjct: 69 DIQPKWEAPENWDGGRWLIIINKGKTPEVLDAVWLEILLALIGEQFGKDMESICGLVCNV 128
Query: 508 KAK-SKI 525
+ + SKI
Sbjct: 129 RGQGSKI 135
>AL117195-23|CAB60769.1| 240|Caenorhabditis elegans Hypothetical
protein Y57A10A.30a protein.
Length = 240
Score = 86.2 bits (204), Expect = 2e-17
Identities = 47/127 (37%), Positives = 69/127 (54%), Gaps = 5/127 (3%)
Frame = +1
Query: 160 HPLEHTWSYW-LYTNKSKEWIHNLVELSTFATVEDYWCLYHYMKLPSELNHGQDYMIFKK 336
+PL+ WS+W L +++ W L ++ TF TV ++W Y + PS LN DY +F+
Sbjct: 48 YPLQRNWSWWFLNDDRNASWQDRLKKVYTFNTVPEFWAFYEAILPPSGLNDLCDYNVFRD 107
Query: 337 GIQPTWEDPINEKGGRW--IICESKSARNXXXXXXXXXXXMIGENF-EHPDLICGVVVNI 507
IQP WE P N GGRW II + K+ +IGE F + + ICG+V N+
Sbjct: 108 DIQPKWEAPENWDGGRWLIIINKGKTPEVLDAVWLEILLALIGEQFGKDMESICGLVCNV 167
Query: 508 KAK-SKI 525
+ + SKI
Sbjct: 168 RGQGSKI 174
>AF214652-1|AAF62415.1| 201|Caenorhabditis elegans translation
initiation factor eIF4Eisoform 5 protein.
Length = 201
Score = 86.2 bits (204), Expect = 2e-17
Identities = 47/127 (37%), Positives = 69/127 (54%), Gaps = 5/127 (3%)
Frame = +1
Query: 160 HPLEHTWSYW-LYTNKSKEWIHNLVELSTFATVEDYWCLYHYMKLPSELNHGQDYMIFKK 336
+PL+ WS+W L +++ W L ++ TF TV ++W Y + PS LN DY +F+
Sbjct: 9 YPLQRNWSWWFLNDDRNASWQDRLKKVYTFNTVPEFWAFYEAILPPSGLNDLCDYNVFRD 68
Query: 337 GIQPTWEDPINEKGGRW--IICESKSARNXXXXXXXXXXXMIGENF-EHPDLICGVVVNI 507
IQP WE P N GGRW II + K+ +IGE F + + ICG+V N+
Sbjct: 69 DIQPKWEAPENWDGGRWLIIINKGKTPEVLDAVWLEILLALIGEQFGKDMESICGLVCNV 128
Query: 508 KAK-SKI 525
+ + SKI
Sbjct: 129 RGQGSKI 135
>U64605-1|AAF98601.1| 212|Caenorhabditis elegans Initiation factor
4e (eif4e) familyprotein 4 protein.
Length = 212
Score = 69.3 bits (162), Expect = 2e-12
Identities = 41/133 (30%), Positives = 66/133 (49%), Gaps = 3/133 (2%)
Frame = +1
Query: 172 HTWSYWLY-TNK--SKEWIHNLVELSTFATVEDYWCLYHYMKLPSELNHGQDYMIFKKGI 342
+T+SY++ T K +++ + + +VE +W + + K P+E+ D FK G+
Sbjct: 37 YTFSYFMRPTGKFDPEDYASYVQPVGIMKSVEQFWSIMVHFKRPTEMCDKADIHFFKTGV 96
Query: 343 QPTWEDPINEKGGRWIICESKSARNXXXXXXXXXXXMIGENFEHPDLICGVVVNIKAKSK 522
+P WEDP N KGG+WII K +IGE F D +CG V +I+ +
Sbjct: 97 KPVWEDPANCKGGKWIIRLKKGLST--RIWENLLMAIIGEQFLVGDELCGAVCSIRNQE- 153
Query: 523 ICDIMDTW*RQTE 561
DI+ W R +
Sbjct: 154 --DIISLWNRNAD 164
>AF214651-1|AAF62414.1| 212|Caenorhabditis elegans translation
initiation factor eIF4Eisoform 4 protein.
Length = 212
Score = 69.3 bits (162), Expect = 2e-12
Identities = 41/133 (30%), Positives = 66/133 (49%), Gaps = 3/133 (2%)
Frame = +1
Query: 172 HTWSYWLY-TNK--SKEWIHNLVELSTFATVEDYWCLYHYMKLPSELNHGQDYMIFKKGI 342
+T+SY++ T K +++ + + +VE +W + + K P+E+ D FK G+
Sbjct: 37 YTFSYFMRPTGKFDPEDYASYVQPVGIMKSVEQFWSIMVHFKRPTEMCDKADIHFFKTGV 96
Query: 343 QPTWEDPINEKGGRWIICESKSARNXXXXXXXXXXXMIGENFEHPDLICGVVVNIKAKSK 522
+P WEDP N KGG+WII K +IGE F D +CG V +I+ +
Sbjct: 97 KPVWEDPANCKGGKWIIRLKKGLST--RIWENLLMAIIGEQFLVGDELCGAVCSIRNQE- 153
Query: 523 ICDIMDTW*RQTE 561
DI+ W R +
Sbjct: 154 --DIISLWNRNAD 164
>Z81545-8|CAB04444.1| 327|Caenorhabditis elegans Hypothetical
protein F49H6.11 protein.
Length = 327
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -1
Query: 594 FSFTVLPIFIFFCLSSPRVHNVTYFAFRFNIDDNAAN*IGMFEIF 460
F F VL I +FFC+S R N T D+N + +F +F
Sbjct: 65 FVFIVLAIVLFFCIS--RESNSTKAHLGIQNDENLMKIVAVFTLF 107
>Z98851-5|CAB11541.1| 596|Caenorhabditis elegans Hypothetical
protein H12I19.5b protein.
Length = 596
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -3
Query: 610 SVNIQFLFYCFADLHIFLFVFTTCP*-CHIFCFSL 509
S++++ FY L I+L + T P CHI CF++
Sbjct: 142 SLSVEVQFYLIIPL-IYLLIIRTLPQKCHILCFTI 175
>Z98851-4|CAB11542.1| 607|Caenorhabditis elegans Hypothetical
protein H12I19.5a protein.
Length = 607
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -3
Query: 610 SVNIQFLFYCFADLHIFLFVFTTCP*-CHIFCFSL 509
S++++ FY L I+L + T P CHI CF++
Sbjct: 142 SLSVEVQFYLIIPL-IYLLIIRTLPQKCHILCFTI 175
>Z69793-6|CAI46593.1| 424|Caenorhabditis elegans Hypothetical
protein R03A10.4b protein.
Length = 424
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +1
Query: 316 DYMIFKKGIQ-PTWEDPINEKGGRWIICESKSA 411
DY+ K+GI PT EDP + RW+ E K A
Sbjct: 347 DYVHLKEGINLPTEEDPDDFVFSRWLCREKKLA 379
>Z69793-5|CAA93673.2| 441|Caenorhabditis elegans Hypothetical
protein R03A10.4a protein.
Length = 441
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +1
Query: 316 DYMIFKKGIQ-PTWEDPINEKGGRWIICESKSA 411
DY+ K+GI PT EDP + RW+ E K A
Sbjct: 364 DYVHLKEGINLPTEEDPDDFVFSRWLCREKKLA 396
>Z81579-1|CAB04655.1| 376|Caenorhabditis elegans Hypothetical
protein R13H4.3 protein.
Length = 376
Score = 27.5 bits (58), Expect = 8.7
Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = -3
Query: 199 LCKASSSKCAREDVLLLARTRIED*YHHLASHVDWTVQTSLLIFFKIRNHTIL--LSSLQ 26
+CK ++ KCAR +V L+A+ E ++ + D+ + S FK ++ + L +Q
Sbjct: 145 VCKPTAIKCARHEV-LVAQGDQESNAYYSVKYADFFSELSQTTGFKHCSYMDINGLFDIQ 203
Query: 25 RSNVKNLT 2
R + N+T
Sbjct: 204 RELIHNMT 211
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Frame = -2
Query: 473 CSKFSPIISRIRSNHRGSRLRADLLS--QIIQRPPFSLIGSSHVG*IPFLK 327
C +S ++ R+RS+ GS+ DL+ Q I R +LI ++HVG + L+
Sbjct: 309 CCLYSLVLKRLRSSEVGSKYELDLIDFLQEIVRCVRTLI-NTHVGLVLVLR 358
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Frame = -2
Query: 473 CSKFSPIISRIRSNHRGSRLRADLLS--QIIQRPPFSLIGSSHVG*IPFLK 327
C +S ++ R+RS+ GS+ DL+ Q I R +LI ++HVG + L+
Sbjct: 309 CCLYSLVLKRLRSSEVGSKYELDLIDFLQEIVRCVRTLI-NTHVGLVLVLR 358
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,595,229
Number of Sequences: 27780
Number of extensions: 303813
Number of successful extensions: 866
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 857
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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