Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10g15r
         (690 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q46C24 Cluster: Putative uncharacterized protein; n=1; ...    38   0.23 
UniRef50_A2AX81 Cluster: Gustatory receptor candidate 19; n=1; T...    36   1.2  
UniRef50_Q11NI8 Cluster: Putative uncharacterized protein; n=1; ...    34   3.8  
UniRef50_Q9BLB2 Cluster: Serpentine receptor, class z protein 9;...    34   3.8  
UniRef50_A5K0S8 Cluster: Putative uncharacterized protein; n=1; ...    34   3.8  
UniRef50_UPI00015C4AC3 Cluster: molybdenum-pterin binding protei...    33   5.0  
UniRef50_Q8STM7 Cluster: Similarity to HYPOTHETICAL TRANSMEMBRAN...    33   5.0  
UniRef50_A2F5N7 Cluster: Putative uncharacterized protein; n=1; ...    33   6.6  
UniRef50_Q488R3 Cluster: Putative membrane protein; n=1; Colwell...    33   8.7  
UniRef50_Q4XHA5 Cluster: Putative uncharacterized protein; n=1; ...    33   8.7  
UniRef50_A7RQY5 Cluster: Predicted protein; n=2; Nematostella ve...    33   8.7  
UniRef50_A7KCS7 Cluster: NADH dehydrogenase subunit 1; n=4; Dika...    33   8.7  

>UniRef50_Q46C24 Cluster: Putative uncharacterized protein; n=1;
           Methanosarcina barkeri str. Fusaro|Rep: Putative
           uncharacterized protein - Methanosarcina barkeri (strain
           Fusaro / DSM 804)
          Length = 331

 Score = 37.9 bits (84), Expect = 0.23
 Identities = 17/68 (25%), Positives = 41/68 (60%)
 Frame = -1

Query: 342 KKMVYDLTATSGHFYCMHINYYMLVVFSALKFIKLLNSMINKMHDMYLICIMYLICIFTM 163
           K + Y    ++G    +++N  + V+    +FIK++ ++ N  + ++++ I+YLIC+F+ 
Sbjct: 171 KYIHYSYWLSTGLIIGLNMNELLFVISFKNQFIKVITNLPN--YKIFVLLILYLICLFSS 228

Query: 162 FCCFQLLF 139
           + C  +L+
Sbjct: 229 WFCIFILY 236


>UniRef50_A2AX81 Cluster: Gustatory receptor candidate 19; n=1;
           Tribolium castaneum|Rep: Gustatory receptor candidate 19
           - Tribolium castaneum (Red flour beetle)
          Length = 355

 Score = 35.5 bits (78), Expect = 1.2
 Identities = 17/71 (23%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
 Frame = -1

Query: 300 YCMHINYYMLVVFSALKFIKLLNSMINKMHDMYLICIMYLICIFTMFCCFQLLFSID*L- 124
           + +H+ +Y +++     +      ++  +H + L+CI Y   +  +FCC  ++F++  L 
Sbjct: 222 FTIHLLFYCVLIILLCIYYFYYAFILFTVHLLLLVCIYYFYYMHLLFCCAFIIFTMHLLF 281

Query: 123 LFRIYQTICLL 91
           L  IY   C L
Sbjct: 282 LLCIYYFYCAL 292



 Score = 32.7 bits (71), Expect = 8.7
 Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 9/79 (11%)
 Frame = -1

Query: 306 HFY-CMHINYYMLVVFSALKFIKLLNSMINKMHDMYLICIMY-------LICIFTMFCCF 151
           HF  C +  YY  ++   + +      +I  +H ++L+CI Y       L+CI+  +C F
Sbjct: 95  HFLLCTYYFYYAFIILLCVYYFYYA-FIIFTVHLLFLLCIYYFVVPLFFLLCIYYFYCAF 153

Query: 150 QLLFSID*L-LFRIYQTIC 97
            ++F++  L L  IY   C
Sbjct: 154 -IIFTVHLLFLLCIYHFFC 171


>UniRef50_Q11NI8 Cluster: Putative uncharacterized protein; n=1;
           Cytophaga hutchinsonii ATCC 33406|Rep: Putative
           uncharacterized protein - Cytophaga hutchinsonii (strain
           ATCC 33406 / NCIMB 9469)
          Length = 291

 Score = 33.9 bits (74), Expect = 3.8
 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
 Frame = -1

Query: 330 YDLTATSGHFYCMHINYYMLVVFSALKFIKLL--NSMINKMHDMYLICIMYLICIFTMFC 157
           ++LT    +FY + I +  +V +    F+K+L      N  H MY    M L+    M  
Sbjct: 227 FNLTGKLNNFYLVQIFFIPIVAYYIYWFVKVLQDTKAANFKHTMY----MNLVAAICMNS 282

Query: 156 CFQLLFSID 130
           CF +L+SI+
Sbjct: 283 CFLVLYSIN 291


>UniRef50_Q9BLB2 Cluster: Serpentine receptor, class z protein 9;
           n=1; Caenorhabditis elegans|Rep: Serpentine receptor,
           class z protein 9 - Caenorhabditis elegans
          Length = 281

 Score = 33.9 bits (74), Expect = 3.8
 Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
 Frame = -1

Query: 348 ILKKMVYDLTATSGHFYCMHIN---YYMLVVFSAL-KFIKLLNSMINKMHDMYLICIMYL 181
           IL   V    A    F+  + N   Y +L+V   +    ++L   ++   + Y++C   L
Sbjct: 138 ILLVFVLGFLALKSGFFGKNANIMAYVLLIVILPICALFQILIQFVSAQRNKYILCQFIL 197

Query: 180 ICIFTMFCCFQLLFSID*LLFRIYQ 106
           + I  + CC   LF +   +  ++Q
Sbjct: 198 VVIMKITCCIMSLFRVQATIHEVFQ 222


>UniRef50_A5K0S8 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium vivax|Rep: Putative uncharacterized protein -
            Plasmodium vivax
          Length = 1638

 Score = 33.9 bits (74), Expect = 3.8
 Identities = 15/49 (30%), Positives = 29/49 (59%)
 Frame = -1

Query: 345  LKKMVYDLTATSGHFYCMHINYYMLVVFSALKFIKLLNSMINKMHDMYL 199
            L++++YD    S  F C   +Y  L++    + +KL+N+M+N   D+Y+
Sbjct: 1499 LEELLYDRNKCSDFFACTGEDYTFLII----QLLKLINTMLNTSRDIYI 1543


>UniRef50_UPI00015C4AC3 Cluster: molybdenum-pterin binding protein;
           n=1; Campylobacter concisus 13826|Rep: molybdenum-pterin
           binding protein - Campylobacter concisus 13826
          Length = 789

 Score = 33.5 bits (73), Expect = 5.0
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = -1

Query: 312 SGHFYCMHINYYMLV---VFSALKFIKLLNSMINKMHDMYLICIMYLICIFTM 163
           S H Y  H  +++++   +F+ L      N +INK HD  L  I YL+  F +
Sbjct: 198 SNHLYIRHSGFFLIIASAIFTLLNLYVFYNELINKGHDFTLHSI-YLVPFFLL 249


>UniRef50_Q8STM7 Cluster: Similarity to HYPOTHETICAL TRANSMEMBRANE
           PROTEIN YNO3_YEAST; n=1; Encephalitozoon cuniculi|Rep:
           Similarity to HYPOTHETICAL TRANSMEMBRANE PROTEIN
           YNO3_YEAST - Encephalitozoon cuniculi
          Length = 206

 Score = 33.5 bits (73), Expect = 5.0
 Identities = 19/62 (30%), Positives = 34/62 (54%)
 Frame = -1

Query: 345 LKKMVYDLTATSGHFYCMHINYYMLVVFSALKFIKLLNSMINKMHDMYLICIMYLICIFT 166
           L+ +   LT  SG+F  + ++   +V +S  K++ +L   +NKM  + +I  MYL   F 
Sbjct: 107 LEAVCIALTRISGYFVDVGLSTLDVVAYSGYKYVIVLLLQLNKMRYVQVIGGMYLYVSFF 166

Query: 165 MF 160
           +F
Sbjct: 167 VF 168


>UniRef50_A2F5N7 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 892

 Score = 33.1 bits (72), Expect = 6.6
 Identities = 13/47 (27%), Positives = 25/47 (53%)
 Frame = +3

Query: 510 FNEKQLLNIKNHYDSSPQESTFVIRSWPDVIGPSLFADALRLGQQPQ 650
           +N    +N    YD+   + + V+ S+P  IG S +A  +R+  +P+
Sbjct: 71  YNFGSAMNTNLPYDNGNDDKSNVVESYPQNIGDSTYASMMRMNSEPE 117


>UniRef50_Q488R3 Cluster: Putative membrane protein; n=1; Colwellia
           psychrerythraea 34H|Rep: Putative membrane protein -
           Colwellia psychrerythraea (strain 34H / ATCC BAA-681)
           (Vibriopsychroerythus)
          Length = 436

 Score = 32.7 bits (71), Expect = 8.7
 Identities = 24/104 (23%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
 Frame = -1

Query: 357 VQGILKKMVYDLTATSGHFYCMHINYYMLVVFSALKFIKLLNSMINKMHDMYL------- 199
           +QG+L K++  L+ T       H+    L+ FSA++FI  ++  +NK H + L       
Sbjct: 332 IQGMLLKILPFLSYT-------HLQQRCLIDFSAMQFIPHMHEFLNKKHGLALYYMHIFS 384

Query: 198 -ICIMYLICIFTMFCCFQLLFSID*LLFRIYQTICLLYNCTVQQ 70
            + ++ ++C  +++  F +L  ++ +   +    C+    TV Q
Sbjct: 385 GLSLVAVLCEPSLYFVFAILLLLEFIWLLVLMVRCMRLYFTVNQ 428


>UniRef50_Q4XHA5 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 66

 Score = 32.7 bits (71), Expect = 8.7
 Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = -1

Query: 225 INKMHDMYLICIMYLICIFTMFCCFQLLFSI-D*LLFRIYQTICLLY 88
           I K+ D Y I   YLI I+   C + L  +I + L+  +Y  +C+LY
Sbjct: 12  IKKIRDKYNIISPYLINIYNSLCIYNLYENIYNYLILYLYIILCILY 58


>UniRef50_A7RQY5 Cluster: Predicted protein; n=2; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 257

 Score = 32.7 bits (71), Expect = 8.7
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = -2

Query: 224 LIKCMTCI*FV*CI*FVFLRCFVVFNCCLVSTNYYFEYIKPYVCCII 84
           +I  +TC+    C    +L C + + CC++    Y   + PY+CC I
Sbjct: 161 VIPYLTCVIPYLCCVIPYLCCAIPYLCCVLPLFPYLCCVIPYLCCAI 207


>UniRef50_A7KCS7 Cluster: NADH dehydrogenase subunit 1; n=4;
           Dikarya|Rep: NADH dehydrogenase subunit 1 - Pleurotus
           ostreatus (Oyster mushroom) (White-rot fungus)
          Length = 346

 Score = 32.7 bits (71), Expect = 8.7
 Identities = 15/30 (50%), Positives = 19/30 (63%)
 Frame = -3

Query: 529 NSCFSLN*IILRLDTCIYCLFFLISHSGLP 440
           NS  +L  IIL L TCI+C FF+   + LP
Sbjct: 279 NSIINLQSIILGLKTCIFCFFFVWFRATLP 308


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 583,328,407
Number of Sequences: 1657284
Number of extensions: 10838415
Number of successful extensions: 24560
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 23294
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24504
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54132236449
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)