Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10g15r
         (690 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_40203| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.7  
SB_10241| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.7  
SB_50198| Best HMM Match : Frizzled (HMM E-Value=0)                    29   3.6  
SB_48179| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.6  
SB_35047| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.7  
SB_737| Best HMM Match : 7tm_1 (HMM E-Value=1.9e-35)                   29   4.7  
SB_29757| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.2  

>SB_40203| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 625

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 16/60 (26%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
 Frame = -1

Query: 297 CMHINYYMLVVFSALKF---IKLLNSMINKMHDMYLI--CIMYLICIFTMFCCFQLLFSI 133
           CM   Y + +V + + +   I+L+ + +  +++++LI  C++YL  I+ +  C Q L+ I
Sbjct: 235 CMQYLYEIWLVLACMLYLYEIRLVLACMLYLYEIWLILACMLYLYEIWLILACMQYLYEI 294


>SB_10241| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 155

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 16/60 (26%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
 Frame = -1

Query: 297 CMHINYYMLVVFSALKF---IKLLNSMINKMHDMYLI--CIMYLICIFTMFCCFQLLFSI 133
           CM   Y + +V + + +   I+L+ + +  +++++LI  C++YL  I+ +  C Q L+ I
Sbjct: 26  CMQYLYEIWLVLACMLYLYEIRLVLACMLYLYEIWLILACMLYLYEIWLILACMQYLYEI 85


>SB_50198| Best HMM Match : Frizzled (HMM E-Value=0)
          Length = 654

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = -3

Query: 688 IANGDSRDGANKACGC*PNLSASANNEGPITSGHDRITNVDSCGDES**FLMFNS 524
           + NG S D  NK+      L A  NN GP+   +  +   D C  +    LMF+S
Sbjct: 210 VLNGGSLDNLNKSTIEALALQACRNNTGPLRYKYTYVEKYDQCVPQCKSDLMFSS 264


>SB_48179| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 231

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = +1

Query: 148 LKTTKHRKNTNQIHYTNQIHVMHFINH*IQ*LYKFQCTK 264
           +KTT   K+   +H++ +IH  + IN  +  L  FQC++
Sbjct: 1   MKTTVRSKSHVHVHFSKRIHRRYGINSSLLVLATFQCSQ 39


>SB_35047| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 998

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -2

Query: 155 VFNCCLVSTNYYFEYIKPYVCCIIVQFNNVQLVSVIL 45
           VFN C V+ N YF  +KP    +++ + + + V   L
Sbjct: 720 VFNLCAVAVNQYFVIVKPLHYPLLMTYTHARRVITAL 756


>SB_737| Best HMM Match : 7tm_1 (HMM E-Value=1.9e-35)
          Length = 432

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 13/34 (38%), Positives = 23/34 (67%)
 Frame = -2

Query: 143 CLVSTNYYFEYIKPYVCCIIVQFNNVQLVSVILI 42
           C++S N Y + +KP V C +  FN+ + +SVI++
Sbjct: 180 CVISVNRYLKIVKPRVYCSV--FNS-KTISVIIL 210


>SB_29757| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 300

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 17/91 (18%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
 Frame = -1

Query: 303 FYCMHINYYML-VVFSALKFIKLLNSMINKMHDMYLICIMYLI-CIFTMFCCFQLLFSID 130
           + C+ + Y  L V+++ L+ +     M+     +   C+  L  C+  ++ C ++L++  
Sbjct: 198 YACLRLLYACLRVLYACLRVLYACLRMLYACLRVLYACLRVLYACLRVLYACLRVLYACL 257

Query: 129 *LLFRIYQTICLLYNCTVQQCTVSFRNFN*Y 37
            +L+     +   + C ++  T   R F  Y
Sbjct: 258 HVLYACLHVLYACFTCYMRVLTCYMRVFACY 288


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,425,969
Number of Sequences: 59808
Number of extensions: 350703
Number of successful extensions: 698
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 693
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1793485733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)