Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10g15r
         (690 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023106-1|AAY55522.1|  208|Drosophila melanogaster IP08717p pro...    30   3.4  
BT022958-1|AAY55374.1|  208|Drosophila melanogaster IP08417p pro...    30   3.4  

>BT023106-1|AAY55522.1|  208|Drosophila melanogaster IP08717p
           protein.
          Length = 208

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 16/59 (27%), Positives = 31/59 (52%)
 Frame = -1

Query: 336 MVYDLTATSGHFYCMHINYYMLVVFSALKFIKLLNSMINKMHDMYLICIMYLICIFTMF 160
           M YDLT T  + Y +    Y L ++S + ++ L   +I   + ++  CI  ++ +F M+
Sbjct: 103 MAYDLTGTGLYLYALATGTYSLSIYSLVLYVVL--DVIWGFY-LFAFCIGCVVMMFLMY 158


>BT022958-1|AAY55374.1|  208|Drosophila melanogaster IP08417p
           protein.
          Length = 208

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 16/59 (27%), Positives = 31/59 (52%)
 Frame = -1

Query: 336 MVYDLTATSGHFYCMHINYYMLVVFSALKFIKLLNSMINKMHDMYLICIMYLICIFTMF 160
           M YDLT T  + Y +    Y L ++S + ++ L   +I   + ++  CI  ++ +F M+
Sbjct: 103 MAYDLTGTGLYLYALATGTYSLSIYSLVLYVVL--DVIWGFY-LFAFCIGCVVMMFLMY 158


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,128,719
Number of Sequences: 53049
Number of extensions: 493524
Number of successful extensions: 1003
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1003
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3005453946
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)