Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10g15f
(624 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 91 9e-20
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 87 2e-18
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 86 4e-18
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 85 1e-17
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 82 7e-17
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 81 1e-16
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 80 3e-16
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 79 5e-16
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 63 3e-11
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 62 5e-11
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 50 4e-07
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 47 3e-06
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 47 3e-06
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 42 1e-04
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 40 2e-04
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 38 9e-04
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 36 0.004
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 35 0.008
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 35 0.011
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 31 0.10
SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces ... 29 0.41
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 29 0.41
SPBC32H8.11 |mei4||meiotic forkhead transcription factor Mei4 |S... 26 3.8
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 26 3.8
SPBC119.15 |||AAA family ATPase, unknown biological role|Schizos... 25 6.7
SPBC19C2.01 |cdc28|prp8|ATP-dependent RNA helicase Cdc28 |Schizo... 25 6.7
SPCC736.04c |gma12||alpha-1,2-galactosyltransferase Gma12 |Schiz... 25 6.7
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 25 8.9
SPBC1711.17 |prp16|SPBC17G9.01|ATP-dependent RNA helicase Prp16|... 25 8.9
SPBC530.13 |||cyclin Ctk2|Schizosaccharomyces pombe|chr 2|||Manual 25 8.9
SPBC1706.03 |fzo1|SPBC839.01|mitochondrial fusion GTPase protein... 25 8.9
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 91.5 bits (217), Expect = 9e-20
Identities = 41/95 (43%), Positives = 67/95 (70%)
Frame = +3
Query: 339 RREHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQLW 518
+++HL K++++GE G GKTSI+ +YV++ FS+ Y+ATIG DF K + D + ++ LQLW
Sbjct: 4 KKKHLLKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVD-DKVVTLQLW 62
Query: 519 DIAGQERFGNMTRVYYKEAVGAFIVFDVSRVATFD 623
D AGQERF ++ +Y+ A +V+DV+ +F+
Sbjct: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFE 97
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 87.0 bits (206), Expect = 2e-18
Identities = 38/93 (40%), Positives = 66/93 (70%)
Frame = +3
Query: 345 EHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQLWDI 524
++L+K ++IG+ G GK++++ R+ F+ ++TIGV+FA + + D N I+ Q+WD
Sbjct: 8 DYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLD-NKKIKAQIWDT 66
Query: 525 AGQERFGNMTRVYYKEAVGAFIVFDVSRVATFD 623
AGQER+ +T YY+ AVGA IV+D+++ ++FD
Sbjct: 67 AGQERYRAITSAYYRGAVGALIVYDITKQSSFD 99
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 85.8 bits (203), Expect = 4e-18
Identities = 37/93 (39%), Positives = 63/93 (67%)
Frame = +3
Query: 345 EHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQLWDI 524
++L+K+L+IG+ G GK+ ++ R+ +++ Y +TIGVDF ++ + T ++LQ+WD
Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKT-VKLQIWDT 64
Query: 525 AGQERFGNMTRVYYKEAVGAFIVFDVSRVATFD 623
AGQERF +T YY+ A G IV+DV+ +F+
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQDSFN 97
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 84.6 bits (200), Expect = 1e-17
Identities = 36/93 (38%), Positives = 61/93 (65%)
Frame = +3
Query: 345 EHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQLWDI 524
++L K+L+IG+ G GK+ ++ R+ F+ + TIG+DF ++ + D I +LQ+WD
Sbjct: 7 DYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRI-KLQIWDT 65
Query: 525 AGQERFGNMTRVYYKEAVGAFIVFDVSRVATFD 623
AGQERF +T YY+ A+G +++DV+ +FD
Sbjct: 66 AGQERFRTITTAYYRGAMGILLLYDVTDKKSFD 98
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 81.8 bits (193), Expect = 7e-17
Identities = 37/89 (41%), Positives = 59/89 (66%)
Frame = +3
Query: 354 YKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQLWDIAGQ 533
+K++ +GE GKTS+I R+++ F Y+ATIG+DF K + + T +RLQLWD AGQ
Sbjct: 12 FKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAGQ 70
Query: 534 ERFGNMTRVYYKEAVGAFIVFDVSRVATF 620
ERF ++ Y +++ A IV+D++ +F
Sbjct: 71 ERFRSLIPSYIRDSSVAIIVYDITNHNSF 99
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 81.4 bits (192), Expect = 1e-16
Identities = 37/89 (41%), Positives = 61/89 (68%)
Frame = +3
Query: 357 KILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQLWDIAGQE 536
K++++G+ G GKT ++ ++V+Q FS+ Y+ATIG DF K + D + ++ LQLWD AGQE
Sbjct: 10 KVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVD-DKLVTLQLWDTAGQE 68
Query: 537 RFGNMTRVYYKEAVGAFIVFDVSRVATFD 623
RF ++ +Y+ A IV++V+ +FD
Sbjct: 69 RFQSLGMAFYRGADCCVIVYNVNNSKSFD 97
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 79.8 bits (188), Expect = 3e-16
Identities = 36/99 (36%), Positives = 64/99 (64%), Gaps = 3/99 (3%)
Frame = +3
Query: 336 ERREHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLN---WDSNTIIR 506
E ++L KI++ G GTGK+ +++R+V + T+G+DFA ++++ + I+
Sbjct: 4 ESYDYLVKIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIK 63
Query: 507 LQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVSRVATFD 623
LQ+WD AGQE+F ++ R YY+ A GA +V+DV+ +F+
Sbjct: 64 LQIWDTAGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFE 102
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 79.0 bits (186), Expect = 5e-16
Identities = 31/89 (34%), Positives = 59/89 (66%)
Frame = +3
Query: 357 KILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQLWDIAGQE 536
K++++G+ GK+S++ R+V F + +TIG F + L D NT ++L++WD AGQE
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQE 75
Query: 537 RFGNMTRVYYKEAVGAFIVFDVSRVATFD 623
R+ ++ +YY+ A A +V+D+++ A+ +
Sbjct: 76 RYKSLAPMYYRNANCAIVVYDITQAASLE 104
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 63.3 bits (147), Expect = 3e-11
Identities = 32/89 (35%), Positives = 50/89 (56%)
Frame = +3
Query: 357 KILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQLWDIAGQE 536
K+ +IG+ GKTS++ YV F + T+GV+F K ++ NT I +WD+ GQ
Sbjct: 12 KVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISI-RNTEITFSIWDLGGQR 70
Query: 537 RFGNMTRVYYKEAVGAFIVFDVSRVATFD 623
F NM + +AV +FD+SR +T +
Sbjct: 71 EFVNMLPMVCNDAVAILFMFDLSRKSTLN 99
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 62.5 bits (145), Expect = 5e-11
Identities = 32/90 (35%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Frame = +3
Query: 354 YKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSN-TIIRLQLWDIAG 530
+K++++G+ GTGKT+ +KR++ F + Y AT+GV+ + L++ +N I +WD AG
Sbjct: 10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVE--VHPLHFHTNFGEICFNVWDTAG 67
Query: 531 QERFGNMTRVYYKEAVGAFIVFDVSRVATF 620
QE+ G + YY + I+FDV+ T+
Sbjct: 68 QEKLGGLRDGYYIQGQCGIIMFDVTSRITY 97
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 49.6 bits (113), Expect = 4e-07
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Frame = +3
Query: 339 RREHLY-KILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQL 515
+++ +Y KI+++G+ GKTS++ + +F Q Y TI ++ + D N+I L L
Sbjct: 8 KKKPIYRKIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENYIHDIFV-DGNSI-ELSL 65
Query: 516 WDIAGQERFGNMTRVYYKEAVGAFIVFDV 602
WD AGQE + + + Y + I F V
Sbjct: 66 WDTAGQEEYDQLRSLSYSDTHVIMICFAV 94
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 46.8 bits (106), Expect = 3e-06
Identities = 22/89 (24%), Positives = 45/89 (50%)
Frame = +3
Query: 357 KILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQLWDIAGQE 536
K++V+G+ G GKT ++ + F + Y T+ ++ + ++ +I L LWD AGQE
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQE 75
Query: 537 RFGNMTRVYYKEAVGAFIVFDVSRVATFD 623
+ + + Y + + F + A+ +
Sbjct: 76 EYDRLRPLSYPNSNVILLCFSIDCPASLN 104
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 46.8 bits (106), Expect = 3e-06
Identities = 26/90 (28%), Positives = 46/90 (51%)
Frame = +3
Query: 354 YKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQLWDIAGQ 533
YK++V+G+ G GK+++ + + F Y TI D K D + L + D AGQ
Sbjct: 9 YKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIE-DSYRKKCEIDGEGAL-LDVLDTAGQ 66
Query: 534 ERFGNMTRVYYKEAVGAFIVFDVSRVATFD 623
E + M Y + G +V++++ ++FD
Sbjct: 67 EEYSAMREQYMRTGEGFLLVYNITSRSSFD 96
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 41.5 bits (93), Expect = 1e-04
Identities = 25/89 (28%), Positives = 44/89 (49%)
Frame = +3
Query: 357 KILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQLWDIAGQE 536
K +V+G+ GKT ++ Y F Y T+ ++A+ V+ D L L+D AGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAVTVMIGDEP--YTLGLFDTAGQE 62
Query: 537 RFGNMTRVYYKEAVGAFIVFDVSRVATFD 623
+ + + Y + + F V+ A+F+
Sbjct: 63 DYDRLRPLSYPQTDVFLVCFSVTSPASFE 91
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 40.3 bits (90), Expect = 2e-04
Identities = 21/73 (28%), Positives = 40/73 (54%)
Frame = +3
Query: 357 KILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQLWDIAGQE 536
K++V+G+ GKTS++ + +F Y T+ ++ + D ++ +L LWD AGQE
Sbjct: 10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENY-VSDCRVDGKSV-QLALWDTAGQE 67
Query: 537 RFGNMTRVYYKEA 575
+ + + Y +A
Sbjct: 68 EYERLRPMSYAKA 80
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 38.3 bits (85), Expect = 9e-04
Identities = 24/89 (26%), Positives = 42/89 (47%)
Frame = +3
Query: 357 KILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQLWDIAGQE 536
K++++G+ GKT ++ + F + Y T+ ++ V D I L LWD AGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADV-EVDGRHI-ELALWDTAGQE 65
Query: 537 RFGNMTRVYYKEAVGAFIVFDVSRVATFD 623
+ + + Y ++ I F V + D
Sbjct: 66 DYDRLRPLSYPDSHVVLICFSVDAPESLD 94
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 36.3 bits (80), Expect = 0.004
Identities = 23/89 (25%), Positives = 42/89 (47%)
Frame = +3
Query: 357 KILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQLWDIAGQE 536
K++++G+ GKT ++ + F + Y T+ ++ V D + L LWD AGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADV-EVDGRHV-ELALWDTAGQE 65
Query: 537 RFGNMTRVYYKEAVGAFIVFDVSRVATFD 623
+ + + Y ++ I F V + D
Sbjct: 66 DYDRLRPLSYPDSHVILICFAVDSPDSLD 94
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 35.1 bits (77), Expect = 0.008
Identities = 22/86 (25%), Positives = 43/86 (50%)
Frame = +3
Query: 342 REHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQLWD 521
+E ++L++G GKT+I+K +++ ++ T G F ++ L + +R +WD
Sbjct: 13 KEREVRVLLLGLDNAGKTTILKCLLNEDVNE-VSPTFG--FQIRTLEVEG---LRFTIWD 66
Query: 522 IAGQERFGNMTRVYYKEAVGAFIVFD 599
I GQ+ N + Y++ V D
Sbjct: 67 IGGQKTLRNFWKNYFESTEAIIWVVD 92
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 34.7 bits (76), Expect = 0.011
Identities = 21/89 (23%), Positives = 43/89 (48%)
Frame = +3
Query: 357 KILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQLWDIAGQE 536
+I V+G GK+S+ +YV F + Y TI F+ K + + ++ D AGQ+
Sbjct: 8 RIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTFS-KNIKYKGQE-FATEIIDTAGQD 65
Query: 537 RFGNMTRVYYKEAVGAFIVFDVSRVATFD 623
+ + + G +V+ ++ ++F+
Sbjct: 66 EYSILNSKHSIGIHGYVLVYSITSKSSFE 94
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 31.5 bits (68), Expect = 0.10
Identities = 20/81 (24%), Positives = 39/81 (48%)
Frame = +3
Query: 357 KILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQLWDIAGQE 536
+IL++G GKT+I+ + +Q V F ++ + + + I+ +WD+ GQ+
Sbjct: 23 RILMLGLDAAGKTTILYKLK---LNQSVVTIPTVGFNVETVTYKN---IKFNVWDVGGQD 76
Query: 537 RFGNMTRVYYKEAVGAFIVFD 599
+ + R Y+ G V D
Sbjct: 77 KIRPLWRHYFTGTKGLIFVVD 97
>SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 308
Score = 29.5 bits (63), Expect = 0.41
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +3
Query: 357 KILVIGELGTGKTSIIKRYVHQFFSQHYRAT-IGVDFALKVLNWDSNTIIRLQLWDIAGQ 533
K+L++G G+GK+S+ + ++ R +D + + N + L LWD GQ
Sbjct: 4 KVLLMGRSGSGKSSMRSIVFSNYVAKDTRRLGATIDIEHSHVRFLGNLV--LNLWDCGGQ 61
Query: 534 ERF 542
E F
Sbjct: 62 EAF 64
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 29.5 bits (63), Expect = 0.41
Identities = 18/81 (22%), Positives = 38/81 (46%)
Frame = +3
Query: 357 KILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQLWDIAGQE 536
+IL++G GKT+I+ + + + F ++ + + + I +WD+ GQ+
Sbjct: 19 RILMVGLDAAGKTTILYKLK---LGEIVTTIPTIGFNVETVEYRN---ISFTVWDVGGQD 72
Query: 537 RFGNMTRVYYKEAVGAFIVFD 599
+ + R Y++ G V D
Sbjct: 73 KIRPLWRHYFQNTQGIIFVVD 93
>SPBC32H8.11 |mei4||meiotic forkhead transcription factor Mei4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 517
Score = 26.2 bits (55), Expect = 3.8
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 361 SSSSANWVQGRLP*SNDMSTSSSVNTIEQPSA 456
SS ++N V+ LP SN S SSS + +P+A
Sbjct: 240 SSLNSNIVKPPLPPSNVQSNSSSSENVPKPNA 271
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 26.2 bits (55), Expect = 3.8
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +3
Query: 336 ERREHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIG 455
E +E+ ILV GE G GKT KR + + T+G
Sbjct: 159 ENKEN-QSILVTGESGAGKTENTKRIIQYLAAIASSTTVG 197
>SPBC119.15 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 367
Score = 25.4 bits (53), Expect = 6.7
Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +3
Query: 360 ILVIGELGTGKTSIIKRYVHQFFSQHYRATI-GVDFALKVLNWDSNTIIR 506
I+V+G G+GKT+ +++ S++ I +D A++ L +++N IR
Sbjct: 11 IIVVGMAGSGKTTFMQQLNAHLHSKNKPPYILNLDPAVRNLPYEANIDIR 60
>SPBC19C2.01 |cdc28|prp8|ATP-dependent RNA helicase Cdc28
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1055
Score = 25.4 bits (53), Expect = 6.7
Identities = 7/21 (33%), Positives = 17/21 (80%)
Frame = +3
Query: 360 ILVIGELGTGKTSIIKRYVHQ 422
+L++ E G+GKT+ + +++H+
Sbjct: 437 LLIVAETGSGKTTQLPQFLHE 457
>SPCC736.04c |gma12||alpha-1,2-galactosyltransferase Gma12
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 375
Score = 25.4 bits (53), Expect = 6.7
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +1
Query: 334 LNAGSIYIRSSSSANWV 384
+NAGS++IR+S W+
Sbjct: 249 INAGSLFIRNSEVGRWI 265
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 25.0 bits (52), Expect = 8.9
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +3
Query: 360 ILVIGELGTGKTSIIK 407
+L++GE GTGKT+ I+
Sbjct: 470 LLLVGETGTGKTTTIQ 485
>SPBC1711.17 |prp16|SPBC17G9.01|ATP-dependent RNA helicase
Prp16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1173
Score = 25.0 bits (52), Expect = 8.9
Identities = 7/21 (33%), Positives = 18/21 (85%)
Frame = +3
Query: 360 ILVIGELGTGKTSIIKRYVHQ 422
++V+GE G+GKT+ + +++++
Sbjct: 511 LIVVGETGSGKTTQLAQFLYE 531
>SPBC530.13 |||cyclin Ctk2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 325
Score = 25.0 bits (52), Expect = 8.9
Identities = 20/81 (24%), Positives = 32/81 (39%), Gaps = 2/81 (2%)
Frame = -3
Query: 391 FPVPNSPMTRILYKCSRRSALADACELPACCFCFGDIILGHNVKKHKNKSDQTISMKYLI 212
FPV P+ C L A ++ F DI+L H ++KH S K ++
Sbjct: 73 FPVNEIPLLECATAC-----LVVASKIEDTAKKFRDILLAHYLQKHPGSEVDAHSQKRIL 127
Query: 211 EFSR*NLN--TSHFKLEDPYS 155
R L F++ P++
Sbjct: 128 GLERMTLELICFDFRVRHPHN 148
>SPBC1706.03 |fzo1|SPBC839.01|mitochondrial fusion GTPase
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 758
Score = 25.0 bits (52), Expect = 8.9
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +3
Query: 357 KILVIGELGTGKTSIIKRYVHQ 422
KIL+ G+L GK+++ VH+
Sbjct: 156 KILITGDLNAGKSTLCNALVHK 177
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,506,726
Number of Sequences: 5004
Number of extensions: 49930
Number of successful extensions: 191
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 177
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 275671126
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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