Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10g15f
         (624 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            72   2e-14
AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    36   8e-04
AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.           27   0.48 
AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.     27   0.48 
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    24   3.4  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    23   7.9  

>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 71.7 bits (168), Expect = 2e-14
 Identities = 30/89 (33%), Positives = 56/89 (62%)
 Frame = +3

Query: 354 YKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQLWDIAGQ 533
           +K++++GE   GK+S++ R+V   F ++  +TIG  F  + L  D  T+ + ++WD AGQ
Sbjct: 25  FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTV-KFEIWDTAGQ 83

Query: 534 ERFGNMTRVYYKEAVGAFIVFDVSRVATF 620
           ER+ ++  +YY+ A  A +V+D+    +F
Sbjct: 84  ERYHSLAPMYYRGAQAAIVVYDIQNSDSF 112


>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 36.3 bits (80), Expect = 8e-04
 Identities = 22/89 (24%), Positives = 42/89 (47%)
 Frame = +3

Query: 357 KILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQLWDIAGQE 536
           K +V+G+   GKT ++  Y    F   Y  T   +++  ++       + L LWD AGQE
Sbjct: 8   KCVVVGDGTVGKTCMLISYTTDSFPGEYVPTSFDNYSAPMVV--DGVQVSLGLWDTAGQE 65

Query: 537 RFGNMTRVYYKEAVGAFIVFDVSRVATFD 623
            +  +  + Y +     I + V+  ++F+
Sbjct: 66  DYDRLRPLSYPQTDVFLICYSVASPSSFE 94


>AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.
          Length = 259

 Score = 27.1 bits (57), Expect = 0.48
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = -3

Query: 367 TRILYKCSRRSALADACELPACCFCFGDIILGHNVKKHKNKSD 239
           TR L KC  +S     CEL  C FCF +       + H+ K +
Sbjct: 139 TRPLRKCRNKST----CELDHCVFCFNNKADREVYESHRCKDE 177


>AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.
          Length = 260

 Score = 27.1 bits (57), Expect = 0.48
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = -3

Query: 367 TRILYKCSRRSALADACELPACCFCFGDIILGHNVKKHKNKSD 239
           TR L KC  +S     CEL  C FCF +       + H+ K +
Sbjct: 140 TRPLRKCRNKST----CELDHCVFCFNNKADREVYESHRCKDE 178


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -2

Query: 245  IRSDNFDEVFNRIFSIKFKHIALQTRRSV 159
            +RS N +E+ +R+F  K K   L T+ ++
Sbjct: 1063 VRSTNGEEIVSRLFVSKSKVTPLATKHTI 1091


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -3

Query: 268 NVKKHKNKSDQTISMKYLIEFSR*NLNTS 182
           N  +HK +  Q + M YL+ +    LNTS
Sbjct: 349 NKIRHKKRWSQVMYMYYLLGYRIMQLNTS 377


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 623,231
Number of Sequences: 2352
Number of extensions: 11244
Number of successful extensions: 25
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60632475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)