Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10g14f
         (637 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    25   0.40 
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    23   2.8  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    22   3.7  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   6.5  

>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 25.4 bits (53), Expect = 0.40
 Identities = 15/61 (24%), Positives = 26/61 (42%)
 Frame = +1

Query: 310 HSWVKNFNVLFVDNPVGTGFSYVDNVMQLTKTNDEIALDFVELMRGFYNRRPEFNDVPLY 489
           + W+K  +     NP    F+   + +  T+T D+  + + +L R       EF  V  Y
Sbjct: 124 YEWIKKTSYQSQPNPEPADFADAPDAIGKTRTKDKYRVVYTDLQR--IELEKEFTFVSKY 181

Query: 490 I 492
           I
Sbjct: 182 I 182


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 5/56 (8%)
 Frame = +1

Query: 310 HSWVKNFNVLFVDNPVGTGFSYVDNVMQLTKTNDEIALDF-----VELMRGFYNRR 462
           + W+K  +     NP    F+   + +  T+T D+  + +     VEL + FY  R
Sbjct: 124 YEWIKKTSYQSQPNPEPADFADAPDAIGKTRTKDKYRVVYTDHQRVELEKEFYYSR 179


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -2

Query: 261 SNSCGGAPRASLQPNDEWT 205
           SNS G A   SL+P   W+
Sbjct: 351 SNSSGDAQSTSLRPFSRWS 369


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = +3

Query: 123 RLCDGKRRSSHVLVVILHNSSSREIY*TSTHRLVARRPWGLLHRNWKLRN 272
           RLC+  +R++        N + +E Y      LV+ R W     N KLR+
Sbjct: 247 RLCNKLKRATRFNDF---NEAIKEAYFPKLDSLVSSRAWPSRVANQKLRD 293


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,305
Number of Sequences: 336
Number of extensions: 3318
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)