Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10g14f
         (637 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_23885| Best HMM Match : Peptidase_S10 (HMM E-Value=0)              176   1e-44
SB_34100| Best HMM Match : Abhydrolase_3 (HMM E-Value=6.7e-06)         31   0.78 
SB_1519| Best HMM Match : F5_F8_type_C (HMM E-Value=0)                 29   2.4  
SB_22148| Best HMM Match : Y_phosphatase (HMM E-Value=4.1e-10)         29   2.4  
SB_16503| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.5  
SB_58836| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.7  

>SB_23885| Best HMM Match : Peptidase_S10 (HMM E-Value=0)
          Length = 446

 Score =  176 bits (428), Expect = 1e-44
 Identities = 82/175 (46%), Positives = 109/175 (62%)
 Frame = +1

Query: 112 EQDFGYVTVREGAHMFWWLFYTTAPVEKYTERPLIVWLQXXXXXXXXXXXNFEILGPLDL 291
           ++ + YVTVR  AHMFWWL+       +   +PLI+WLQ           NF  LGPLD+
Sbjct: 32  DEKWDYVTVRPSAHMFWWLYGARGEPSERENKPLILWLQGGPGGSSTGYGNFMELGPLDV 91

Query: 292 SLQERNHSWVKNFNVLFVDNPVGTGFSYVDNVMQLTKTNDEIALDFVELMRGFYNRRPEF 471
           +L+ RN SWV+  NVLFVDNPVG GFSYV +    T     IA D + + + F N  P F
Sbjct: 92  NLKLRNTSWVEVANVLFVDNPVGAGFSYVTDKGAYTTNVTGIAQDLLTMFKAFVNEMPAF 151

Query: 472 NDVPLYIYGQSYGGKMAIDMGLRMHEAEKAGTIRSNLKGIAMGNAWISPVDSTLT 636
             +PLYI+ +SYGGKM    G+ ++ A + G IR N KG+A+G++WISPVDS L+
Sbjct: 152 QTIPLYIFCESYGGKMTSAFGVTLYNAIQQGEIRCNFKGVALGDSWISPVDSVLS 206


>SB_34100| Best HMM Match : Abhydrolase_3 (HMM E-Value=6.7e-06)
          Length = 363

 Score = 31.1 bits (67), Expect = 0.78
 Identities = 14/49 (28%), Positives = 24/49 (48%)
 Frame = +1

Query: 445 GFYNRRPEFNDVPLYIYGQSYGGKMAIDMGLRMHEAEKAGTIRSNLKGI 591
           G+ N    +N   +++ G S GG +   + L  +  E  G   SN+KG+
Sbjct: 192 GYGNATKRYNQEQVFLCGHSAGGHLVSLLALDSNYLENVGVPLSNIKGV 240


>SB_1519| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
          Length = 943

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +1

Query: 313 SWVKNFNVLFVDNPVGTGF 369
           SWV  F+V F +NP GT F
Sbjct: 744 SWVTEFSVQFAENPTGTWF 762


>SB_22148| Best HMM Match : Y_phosphatase (HMM E-Value=4.1e-10)
          Length = 180

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
 Frame = +1

Query: 400 KTNDEIAL--DFVELMRGFYNRRPEFNDVPLYIY---GQSYGGK-MAIDMGLRMHEAEKA 561
           KT   +AL   FV   R    +  +  D P+ ++   GQ + G  +A+D+G+R HE  K 
Sbjct: 90  KTTPNVALFVGFVVASREVSKKYEQEKDAPVIVHCSDGQGFTGVFVALDIGVRSHEESKT 149

Query: 562 GTI 570
             +
Sbjct: 150 SVV 152


>SB_16503| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 626

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
 Frame = +1

Query: 37  KKMSLLYFFL---AVLFSKSVSGQFGPFEQDFGYVTVREGAHMFWWLFYTTAPVEKYTER 207
           +++ LL FFL    +LFS +V    G  E+   + ++ +    FWW   T   V     R
Sbjct: 425 RELGLLIFFLLIGVILFSSAVYYAEGG-EKGTHFKSIPDA---FWWAVVTMTTVGYGDMR 480

Query: 208 PLIVW 222
           P+ VW
Sbjct: 481 PITVW 485


>SB_58836| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 346

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = +1

Query: 358 GTGFSY----VDNVMQLTKTNDEIALDFVELMRGFYNRRPEFNDVPLYIYGQSYGG 513
           GT F Y    +     ++K  D I  + V L R    +  E  D P ++Y ++Y G
Sbjct: 121 GTTFFYEQVNLHKTFVISKETDSIINESVNLPRSHARQGLETRDCPTFVYNKTYEG 176


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,616,355
Number of Sequences: 59808
Number of extensions: 401807
Number of successful extensions: 797
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 796
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1596754500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)