Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10g13f
(572 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 29 0.021
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 29 0.021
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 29 0.021
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 28 0.049
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 28 0.049
AF265297-1|AAG17640.1| 125|Tribolium castaneum putative cytochr... 22 3.2
EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine hydroxy... 21 7.5
EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggeri... 21 7.5
EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggeri... 21 7.5
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 21 7.5
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 21 7.5
AM292334-1|CAL23146.2| 390|Tribolium castaneum gustatory recept... 21 9.9
AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1 ... 21 9.9
AF265213-1|AAF75277.1| 143|Tribolium castaneum putative cytochr... 21 9.9
AF264721-1|AAF75273.1| 126|Tribolium castaneum putative cytochr... 21 9.9
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 29.5 bits (63), Expect = 0.021
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -1
Query: 539 AIQFLGLSFSPLVHSISSSVLCVAVQLCHHRNLASAHE 426
AI LG F+ ++ ++SSV+ V L +H A HE
Sbjct: 270 AIPLLGTYFNCIMFMVASSVVLTVVVLNYHHRTADIHE 307
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 29.5 bits (63), Expect = 0.021
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -1
Query: 539 AIQFLGLSFSPLVHSISSSVLCVAVQLCHHRNLASAHE 426
AI LG F+ ++ ++SSV+ V L +H A HE
Sbjct: 270 AIPLLGTYFNCIMFMVASSVVLTVVVLNYHHRTADIHE 307
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 29.5 bits (63), Expect = 0.021
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -1
Query: 539 AIQFLGLSFSPLVHSISSSVLCVAVQLCHHRNLASAHE 426
AI LG F+ ++ ++SSV+ V L +H A HE
Sbjct: 270 AIPLLGTYFNCIMFMVASSVVLTVVVLNYHHRTADIHE 307
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 28.3 bits (60), Expect = 0.049
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -1
Query: 539 AIQFLGLSFSPLVHSISSSVLCVAVQLCHHRNLASAHE 426
A+ +G F+ ++ ++SSV+ V L +H A HE
Sbjct: 270 AVPLIGTYFNCIMFMVASSVVLTVVVLNYHHRTADIHE 307
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 28.3 bits (60), Expect = 0.049
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -1
Query: 539 AIQFLGLSFSPLVHSISSSVLCVAVQLCHHRNLASAHE 426
A+ +G F+ ++ ++SSV+ V L +H A HE
Sbjct: 270 AVPLIGTYFNCIMFMVASSVVLTVVVLNYHHRTADIHE 307
>AF265297-1|AAG17640.1| 125|Tribolium castaneum putative cytochrome
P450 monooxigenase protein.
Length = 125
Score = 22.2 bits (45), Expect = 3.2
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -1
Query: 392 LHHNIQVQPEP 360
+HHN QV P+P
Sbjct: 93 MHHNPQVYPDP 103
>EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine
hydroxylase protein.
Length = 532
Score = 21.0 bits (42), Expect = 7.5
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +2
Query: 11 KDLRNSSRIRTSYNVISENIAVNKNWF 91
K LR SS + + +NI+ WF
Sbjct: 170 KSLRQSSSLEHCTLIGEDNISAKNPWF 196
>EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggering
hormone receptorisoform B protein.
Length = 451
Score = 21.0 bits (42), Expect = 7.5
Identities = 8/36 (22%), Positives = 18/36 (50%)
Frame = -3
Query: 186 SSYRRKLKSLFPCSFSSLSVKFAVEYICLLILNQFL 79
S++ S+FP + S+ F + +CL ++ +
Sbjct: 53 SNFNESSSSVFPNYIRTTSMVFCIIIMCLGVIGNVM 88
Score = 20.6 bits (41), Expect = 9.9
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -2
Query: 208 FCIAILCIFVPP*TKKPIPLF 146
FCI I+C+ V PI +F
Sbjct: 74 FCIIIMCLGVIGNVMVPIVIF 94
>EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggering
hormone receptorisoform A protein.
Length = 434
Score = 21.0 bits (42), Expect = 7.5
Identities = 8/36 (22%), Positives = 18/36 (50%)
Frame = -3
Query: 186 SSYRRKLKSLFPCSFSSLSVKFAVEYICLLILNQFL 79
S++ S+FP + S+ F + +CL ++ +
Sbjct: 53 SNFNESSSSVFPNYIRTTSMVFCIIIMCLGVIGNVM 88
Score = 20.6 bits (41), Expect = 9.9
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -2
Query: 208 FCIAILCIFVPP*TKKPIPLF 146
FCI I+C+ V PI +F
Sbjct: 74 FCIIIMCLGVIGNVMVPIVIF 94
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 21.0 bits (42), Expect = 7.5
Identities = 7/21 (33%), Positives = 15/21 (71%)
Frame = +2
Query: 176 RYEDAKNCYTKAIIKNPSVAT 238
++ D +N T ++KNPS+++
Sbjct: 84 KHLDFRNSATAELLKNPSLSS 104
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 21.0 bits (42), Expect = 7.5
Identities = 7/21 (33%), Positives = 15/21 (71%)
Frame = +2
Query: 176 RYEDAKNCYTKAIIKNPSVAT 238
++ D +N T ++KNPS+++
Sbjct: 84 KHLDFRNSATAELLKNPSLSS 104
>AM292334-1|CAL23146.2| 390|Tribolium castaneum gustatory receptor
candidate 13 protein.
Length = 390
Score = 20.6 bits (41), Expect = 9.9
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -2
Query: 112 IHMFAHFEPIFIHCYVFT 59
+ + AH+ P+F C FT
Sbjct: 343 VTLSAHYFPVFSACDYFT 360
>AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1
protein protein.
Length = 371
Score = 20.6 bits (41), Expect = 9.9
Identities = 6/12 (50%), Positives = 7/12 (58%)
Frame = -1
Query: 455 HHRNLASAHEPD 420
HH+N H PD
Sbjct: 351 HHQNFGPRHPPD 362
>AF265213-1|AAF75277.1| 143|Tribolium castaneum putative cytochrome
P450 monooxigenaseCYP4Q3 protein.
Length = 143
Score = 20.6 bits (41), Expect = 9.9
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -1
Query: 392 LHHNIQVQPEP 360
LHHN + P+P
Sbjct: 111 LHHNPDIYPDP 121
>AF264721-1|AAF75273.1| 126|Tribolium castaneum putative cytochrome
P450 monooxigenaseCYP4Q2 protein.
Length = 126
Score = 20.6 bits (41), Expect = 9.9
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -1
Query: 392 LHHNIQVQPEP 360
LHHN + P+P
Sbjct: 94 LHHNPDIYPDP 104
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,077
Number of Sequences: 336
Number of extensions: 3148
Number of successful extensions: 17
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14203976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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