Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10g13f
(572 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_44774| Best HMM Match : TPR_2 (HMM E-Value=6.3e-15) 61 5e-10
SB_6453| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 7e-09
SB_55147| Best HMM Match : TPR_2 (HMM E-Value=1.8e-10) 54 1e-07
SB_22714| Best HMM Match : TPR_2 (HMM E-Value=1.2e-17) 52 3e-07
SB_22290| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_35701| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 6e-07
SB_51830| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 8e-07
SB_45140| Best HMM Match : RVT_1 (HMM E-Value=3.8e-32) 50 1e-06
SB_50714| Best HMM Match : TPR_2 (HMM E-Value=2.9e-15) 47 1e-05
SB_40767| Best HMM Match : TPR_2 (HMM E-Value=3.2e-10) 47 1e-05
SB_59454| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_42340| Best HMM Match : DnaJ (HMM E-Value=3.2e-32) 46 2e-05
SB_4485| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_21411| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_50152| Best HMM Match : TPR_1 (HMM E-Value=0.0019) 44 9e-05
SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23) 44 9e-05
SB_54763| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 8e-04
SB_26739| Best HMM Match : TPR_2 (HMM E-Value=1e-34) 41 8e-04
SB_42562| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_49858| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.054
SB_42515| Best HMM Match : TPR_2 (HMM E-Value=2e-14) 34 0.072
SB_43858| Best HMM Match : TPR_2 (HMM E-Value=0.0013) 34 0.095
SB_35100| Best HMM Match : TPR_2 (HMM E-Value=0.0013) 34 0.095
SB_42049| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_46974| Best HMM Match : TPR_1 (HMM E-Value=1.5e-10) 32 0.38
SB_8404| Best HMM Match : TPR_1 (HMM E-Value=0) 31 0.51
SB_25367| Best HMM Match : TPR_1 (HMM E-Value=2.4e-40) 30 1.2
SB_24457| Best HMM Match : TPR_2 (HMM E-Value=1.4e-16) 30 1.2
SB_13550| Best HMM Match : rve (HMM E-Value=3.4e-08) 30 1.5
SB_11364| Best HMM Match : TPR_2 (HMM E-Value=3e-06) 29 2.0
SB_41027| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_37246| Best HMM Match : RVT_1 (HMM E-Value=3.6e-05) 29 2.7
SB_30545| Best HMM Match : Phage_integrase (HMM E-Value=0.1) 29 2.7
SB_51502| Best HMM Match : TPR_2 (HMM E-Value=0) 29 3.6
SB_17634| Best HMM Match : TPR_2 (HMM E-Value=0.06) 26 3.8
SB_59121| Best HMM Match : TPR_1 (HMM E-Value=7.4e-10) 28 4.7
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_19968| Best HMM Match : TPR_2 (HMM E-Value=1.1e-39) 28 4.7
SB_51523| Best HMM Match : TPR_2 (HMM E-Value=0.00012) 28 6.2
SB_16367| Best HMM Match : TPR_1 (HMM E-Value=0) 28 6.2
SB_3059| Best HMM Match : REJ (HMM E-Value=4.8e-06) 28 6.2
SB_56862| Best HMM Match : TPR_2 (HMM E-Value=1.4e-22) 28 6.2
SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35) 27 8.2
SB_34103| Best HMM Match : TPR_1 (HMM E-Value=5.6e-23) 27 8.2
SB_22125| Best HMM Match : TPR_1 (HMM E-Value=7.7e-13) 27 8.2
>SB_44774| Best HMM Match : TPR_2 (HMM E-Value=6.3e-15)
Length = 206
Score = 61.3 bits (142), Expect = 5e-10
Identities = 28/99 (28%), Positives = 55/99 (55%)
Frame = +2
Query: 143 KEQGNRLFSLRRYEDAKNCYTKAIIKNPSVATYFTNRALCHLKMKHWEATCQDCRRALDI 322
K +GNR + L+ Y A Y+KAI P VAT++ NR+ ++ + +++ +D +++I
Sbjct: 38 KAEGNREYGLKNYVSAIALYSKAIEFAPHVATFYGNRSAAYMMISNYDKALEDALLSIEI 97
Query: 323 DTNQVKGHFFLGQALVELECYDEAIKHLHRANDLAREQK 439
D N VKGH+ + + + A++ + + +L + K
Sbjct: 98 DNNFVKGHYRAAKCHLAMGSASNALREIRKVLELDPKNK 136
>SB_6453| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 784
Score = 57.6 bits (133), Expect = 7e-09
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 4/103 (3%)
Frame = +2
Query: 140 LKEQGNRLFSLRRYEDAKNCYTKAIIKNPSVATYFTNRALCHLKMKHWE----ATCQDCR 307
LK GN F +++ A N Y +A+ P+ A + NRA +K + WE A +DC
Sbjct: 337 LKTIGNEAFCKQQFLTAVNMYNEALNLAPNSAVLYANRAAAFIK-RSWEGDVYAALRDCH 395
Query: 308 RALDIDTNQVKGHFFLGQALVELECYDEAIKHLHRANDLAREQ 436
+AL +D N K HF + L EL EA+ L+ + +Q
Sbjct: 396 KALTLDPNHTKAHFRQARCLYELRWCQEALSCLNHFKERFPDQ 438
>SB_55147| Best HMM Match : TPR_2 (HMM E-Value=1.8e-10)
Length = 559
Score = 53.6 bits (123), Expect = 1e-07
Identities = 34/118 (28%), Positives = 63/118 (53%), Gaps = 1/118 (0%)
Frame = +2
Query: 143 KEQGNRLFSLRRYEDAKNCYTKAIIKNPSVATYFTNRALCHLKMKHWEATCQDCRRALDI 322
+E+ +L E+A +T AI+KNP A F RA C ++MK A +DC +A I
Sbjct: 52 REKSGGSDTLGNLEEAIKLFTDAIMKNPHSAPLFAKRASCFIRMKKPNAAIRDCDKAAQI 111
Query: 323 DTNQVKGHFFLGQALVELECYDEAIKHLHRANDLAREQKLN-FGDDIAAQLRTARKKR 493
+ + + + + G+A L +++A K L +A L ++++N + D+ + RK++
Sbjct: 112 NPDSAQIYKWRGRAHEFLGHWEKADKDLAQALKLDFDEQVNEWFKDVHPKEEKERKRK 169
>SB_22714| Best HMM Match : TPR_2 (HMM E-Value=1.2e-17)
Length = 455
Score = 52.4 bits (120), Expect = 3e-07
Identities = 34/98 (34%), Positives = 46/98 (46%), Gaps = 10/98 (10%)
Frame = +2
Query: 137 ELKEQGNRLFSLRRYEDAKNCYTKAII----------KNPSVATYFTNRALCHLKMKHWE 286
E+KE+GN+ F YE A + Y A+ K A + NRA C LK++ +E
Sbjct: 11 EIKEEGNKYFKAGDYEAALSSYAAALKLYSGNEKDKEKQKEKAVIYKNRAACQLKLEKYE 70
Query: 287 ATCQDCRRALDIDTNQVKGHFFLGQALVELECYDEAIK 400
A +D +ALDI N K F QA +EA K
Sbjct: 71 AAIKDATKALDIVPNDPKALFRRSQAFEATGRLEEAFK 108
>SB_22290| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 485
Score = 51.6 bits (118), Expect = 4e-07
Identities = 26/86 (30%), Positives = 47/86 (54%)
Frame = +2
Query: 137 ELKEQGNRLFSLRRYEDAKNCYTKAIIKNPSVATYFTNRALCHLKMKHWEATCQDCRRAL 316
+LK+QGN S + A YT+AI+ +P+ +++NR+ K+ + +D R+ +
Sbjct: 11 KLKDQGNAALSAGDTQKAIEFYTEAILLDPANHVFYSNRSAAFAKLSKYNEALEDARKCV 70
Query: 317 DIDTNQVKGHFFLGQALVELECYDEA 394
+I + KG+ LG A L+ Y +A
Sbjct: 71 EIKPDWGKGYSRLGTAYSFLKMYQKA 96
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/100 (25%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Frame = +2
Query: 137 ELKEQGNRLFSLRRYEDAKNCYTKAIIKNPSVATYFTNRALCHLKMKHWEATCQDCRRAL 316
E KE GN + + ++ A + A NP T++TN A + ++E ++C A+
Sbjct: 232 EEKELGNAAYKKKDFDTAHKHFNNAKELNPDNMTFYTNNAAAFFEEGNYEECIKECLEAV 291
Query: 317 DID-TNQVK----GHFF--LGQALVELECYDEAIKHLHRA 415
++ +N+ + G F +G + + Y +AIK+ ++A
Sbjct: 292 EVGRSNRAEFALIGKAFARIGNSYAKQNNYKDAIKYYNKA 331
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = +2
Query: 137 ELKEQGNRLFSLRRYEDAKNCYTKAIIKNPSVATYFTNRALCHLKMKHWEATCQDCRRAL 316
E KE+GN F + A+ YT+AI +NP A ++NRA K+ + ++ + L
Sbjct: 367 EEKEKGNEYFKKGDFPSAQKHYTEAIKRNPEDAKLYSNRAATFQKLAAFNLALEEAKEGL 426
>SB_35701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 540
Score = 51.2 bits (117), Expect = 6e-07
Identities = 25/89 (28%), Positives = 45/89 (50%)
Frame = +2
Query: 134 KELKEQGNRLFSLRRYEDAKNCYTKAIIKNPSVATYFTNRALCHLKMKHWEATCQDCRRA 313
++LK + N F Y A YT+AI V Y+ NR+ C+LK +++ D +A
Sbjct: 188 EDLKLKANGYFKEGNYNSAITFYTQAIELKADVPAYYGNRSFCYLKTEYYGLALADANKA 247
Query: 314 LDIDTNQVKGHFFLGQALVELECYDEAIK 400
+ +D +KG++ A + L + ++K
Sbjct: 248 IQLDRKYIKGYYRRATANMALGKFKLSLK 276
>SB_51830| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 582
Score = 50.8 bits (116), Expect = 8e-07
Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 9/106 (8%)
Frame = +2
Query: 116 TANLTDKE----LKEQGNRLFSLRRYEDAKNCYTKAIIKNP-----SVATYFTNRALCHL 268
T N+T E K +GN+ F +YE A CYT+AI P ++T++ NRA +
Sbjct: 132 TTNMTPSEQAQVAKLKGNKYFKGCKYEQAIKCYTEAIELCPPENKQDLSTFYQNRAAAYE 191
Query: 269 KMKHWEATCQDCRRALDIDTNQVKGHFFLGQALVELECYDEAIKHL 406
+M +E ++ +AL++++ K +AL +LE E ++ L
Sbjct: 192 QMNQFENVVEEATKALELNSKYTKALMRRARALEKLERKQECLQDL 237
>SB_45140| Best HMM Match : RVT_1 (HMM E-Value=3.8e-32)
Length = 868
Score = 50.4 bits (115), Expect = 1e-06
Identities = 32/92 (34%), Positives = 46/92 (50%)
Frame = +2
Query: 122 NLTDKELKEQGNRLFSLRRYEDAKNCYTKAIIKNPSVATYFTNRALCHLKMKHWEATCQD 301
+L ++ K QGN F+ +Y+ A + YT AI P + NRA +LK + D
Sbjct: 497 HLASEDRKLQGNDHFNHGKYKAAISAYTLAISGAPYNHILYGNRAQSYLKSEDLREGLTD 556
Query: 302 CRRALDIDTNQVKGHFFLGQALVELECYDEAI 397
RRA+ + + KG F QA EL Y+ AI
Sbjct: 557 GRRAVVLKPDWTKGQFRYAQAFFELGYYERAI 588
>SB_50714| Best HMM Match : TPR_2 (HMM E-Value=2.9e-15)
Length = 458
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/90 (27%), Positives = 47/90 (52%)
Frame = +2
Query: 125 LTDKELKEQGNRLFSLRRYEDAKNCYTKAIIKNPSVATYFTNRALCHLKMKHWEATCQDC 304
L +++ +GN + +L Y+ A +T+AI + +F NR+ C ++ +E QD
Sbjct: 267 LQSRQIAVRGNEMANLGNYQAAIELFTQAIKLDARDFRFFGNRSYCFDRLGQFEKALQDA 326
Query: 305 RRALDIDTNQVKGHFFLGQALVELECYDEA 394
A+ + + KG F G+AL L+ + +A
Sbjct: 327 DVAISLAPDWPKGFFRRGRALAGLKLFSDA 356
>SB_40767| Best HMM Match : TPR_2 (HMM E-Value=3.2e-10)
Length = 452
Score = 46.8 bits (106), Expect = 1e-05
Identities = 23/103 (22%), Positives = 49/103 (47%)
Frame = +2
Query: 131 DKELKEQGNRLFSLRRYEDAKNCYTKAIIKNPSVATYFTNRALCHLKMKHWEATCQDCRR 310
++ + +GN+ + Y A + Y K+I+ +P + RA + + +E + D
Sbjct: 284 ERYYRSEGNKKMISKEYRTAIDLYNKSILASPINYFSWCQRATAFISLNKYEESLLDFEE 343
Query: 311 ALDIDTNQVKGHFFLGQALVELECYDEAIKHLHRANDLAREQK 439
+ ++ VKG+ F G + + L Y +A+ L+ A + + K
Sbjct: 344 CIKLNPKWVKGYLFRGLSQLHLRQYKDALVTLNYAGSMCPDDK 386
>SB_59454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Frame = +2
Query: 143 KEQGNRLFSLRRYEDAKNCYTKAII---KNPSV-ATYFTNRALCHLKMKHWEATCQDCRR 310
K++GN F+ Y+ A YT+A+ KN S A + NRA+ K+ + +DC +
Sbjct: 37 KQEGNDAFTGGHYQKAYELYTEALEIDPKNKSTNAKLYYNRAVVGSKLGKNDQAIEDCTQ 96
Query: 311 ALDIDTNQVKGHFFLGQALVELECYDEAIK 400
A+++D K + +E E Y+EA++
Sbjct: 97 AMNLDHTYTKAYLKRANCYMESEKYEEAVR 126
>SB_42340| Best HMM Match : DnaJ (HMM E-Value=3.2e-32)
Length = 264
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Frame = +2
Query: 143 KEQGNRLFSLRRYEDAKNCYTKAII---KNPSV-ATYFTNRALCHLKMKHWEATCQDCRR 310
K++GN F+ Y+ A YT+A+ KN S A + NRA+ K+ + +DC +
Sbjct: 37 KQEGNDAFTGGHYQKAYELYTEALEIDPKNKSTNAKLYYNRAVVGSKLGKNDQAIEDCTQ 96
Query: 311 ALDIDTNQVKGHFFLGQALVELECYDEAIK 400
A+++D K + +E E Y+EA++
Sbjct: 97 AMNLDHTYTKAYLKRANCYMESEKYEEAVR 126
>SB_4485| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1769
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/90 (30%), Positives = 42/90 (46%)
Frame = +2
Query: 137 ELKEQGNRLFSLRRYEDAKNCYTKAIIKNPSVATYFTNRALCHLKMKHWEATCQDCRRAL 316
+ +E+GN +++A + YTK I + F+NRALCHLK+ + DC L
Sbjct: 866 DFREKGNDAVKREEFQEALDWYTKGIELTKTDHRLFSNRALCHLKLNKPKEALADCESCL 925
Query: 317 DIDTNQVKGHFFLGQALVELECYDEAIKHL 406
++ + K AL EL KH+
Sbjct: 926 KLEEHFGKALQRKAWALHELSRLHPDDKHI 955
>SB_21411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 308
Score = 46.4 bits (105), Expect = 2e-05
Identities = 42/160 (26%), Positives = 70/160 (43%), Gaps = 5/160 (3%)
Frame = +2
Query: 29 SRIRTSYNVISENIAVNKNWFKMSKHMYSTANLTDKELKEQGNRLFSLRRYEDAKNCYTK 208
S I+ + +I++N + + +MSK Y L + + + +L Y +A + K
Sbjct: 51 SDIKPTTKLINDN---TQAFLRMSKLHYEIGELEEALRYDGFTIIINLMGYHEAIDKLKK 107
Query: 209 AI---IKN-PSVATYFTNRALCHLKMKHWEATCQDCRRALDIDTNQVKGHFFLGQALVEL 376
A+ KN P V CHLK+ + ++C AL ID N V +A +
Sbjct: 108 ALRTESKNKPLVGKARRQLCHCHLKLGFSQEAIKECNAALSIDENDVDALCDRAEAYILE 167
Query: 377 ECYDEAIKHLHRANDLARE-QKLNFGDDIAAQLRTARKKR 493
E Y+EA+ +A + K+ G D A +L +KR
Sbjct: 168 EMYNEAVNDFQKAKSINEHLHKVQEGLDRAQRLLKQSQKR 207
>SB_50152| Best HMM Match : TPR_1 (HMM E-Value=0.0019)
Length = 94
Score = 44.0 bits (99), Expect = 9e-05
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = +2
Query: 242 FTNRALCHLKMKHWEATCQDCRRALDIDTNQVKGHFFLGQALVELECYDEAI 397
+ N A C LK+ + + +DC AL +D N K F GQA ++ Y+EA+
Sbjct: 43 YLNSAACKLKLAEYPSAIEDCNEALKLDANSAKALFRRGQANEHMKDYEEAM 94
>SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23)
Length = 741
Score = 44.0 bits (99), Expect = 9e-05
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = +2
Query: 242 FTNRALCHLKMKHWEATCQDCRRALDIDTNQVKGHFFLGQALVELECYDEAI 397
+ N A C LK+ + + +DC AL +D N K F GQA ++ Y+EA+
Sbjct: 370 YLNSAACKLKLAEYPSAIEDCNEALKLDANSAKALFRRGQANEHMKDYEEAM 421
Score = 27.5 bits (58), Expect = 8.2
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +2
Query: 74 VNKNWFKMSKHMYSTANLT---DKELKEQGNRLFSLRRYEDAKNCYTKAI 214
V NW K + +S L ++LK GN F ++YE AK Y KA+
Sbjct: 278 VYPNWPKDADIDFSKVELVVEVAEKLKVIGNEQFKQQKYEVAKKKYKKAL 327
>SB_54763| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1190
Score = 40.7 bits (91), Expect = 8e-04
Identities = 19/49 (38%), Positives = 30/49 (61%)
Frame = +2
Query: 248 NRALCHLKMKHWEATCQDCRRALDIDTNQVKGHFFLGQALVELECYDEA 394
N A CHLK+ + + C +ALDID +K F G+AL+ L+ Y+++
Sbjct: 1023 NIAACHLKLGNNFKCIKACNKALDIDKENIKALFRRGKALLNLKDYEKS 1071
>SB_26739| Best HMM Match : TPR_2 (HMM E-Value=1e-34)
Length = 935
Score = 40.7 bits (91), Expect = 8e-04
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 7/118 (5%)
Frame = +2
Query: 134 KELKEQGNRLFSLRRYEDAKNCYTKAII-----KNPSVATYFTNRALCHLKMKHWEATCQ 298
K+ KE+G LF +Y Y+ A+ V+ NR+L LK ++
Sbjct: 399 KKWKERGKELFKANKYSLLDEYYSLALSYAHHSDKELVSQLLCNRSLAFLKKNFLKSALT 458
Query: 299 DCRRALDIDTNQVKGHFFLGQALVELECYDEAIKHLHRANDL--AREQKLNFGDDIAA 466
D + + + KGH+ LG L + + EA+ A DL A E+K + D + A
Sbjct: 459 DAKECVKTRPSWSKGHYRLGSCLAQSDQGVEAMIAFSAAYDLCEAEEEKYDVFDQMLA 516
>SB_42562| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 186
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/40 (40%), Positives = 28/40 (70%)
Frame = +2
Query: 137 ELKEQGNRLFSLRRYEDAKNCYTKAIIKNPSVATYFTNRA 256
+LKE+GN F ++YE+A YT+A+ ++ + ++TNRA
Sbjct: 122 QLKEKGNLAFKQQKYEEAVKLYTQALNQDRTNTAFYTNRA 161
>SB_49858| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 927
Score = 34.7 bits (76), Expect = 0.054
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = +2
Query: 197 CYTKAIIKNPSVATYFTN-RALCHLKMKHWEATCQDCRRALDIDTNQVKGHFFLGQALVE 373
CY KAI PS A ++N + + + + W A +A+ +D N + + LG L E
Sbjct: 182 CYLKAIETQPSFAVAWSNLGCVFNAQGEIWLA-IHHFEKAVQLDPNFLDAYINLGNVLKE 240
Query: 374 LECYDEAIKHLHRANDLAREQKLNFGD 454
+D A+ RA +L+ + G+
Sbjct: 241 ARIFDRAVAAYLRALNLSPNHAVVHGN 267
Score = 31.1 bits (67), Expect = 0.67
Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
Frame = +2
Query: 152 GNRLFSLRRYEDAKNCYTKAIIKNPSVATYFTNRALCHLKMKHWEATCQDCRRALDIDTN 331
GN L ++ + A CY++AI NP+ A +N A H + Q R AL + +
Sbjct: 405 GNLLKEMQDIQGAIQCYSRAIQINPAFADAHSNLASVHKDSGNIPEAIQSYRTALKLKPS 464
Query: 332 QVKGHFFLG---QALVELECYDEAIKHL 406
+ L Q + + YD +K L
Sbjct: 465 FPDAYCNLAHCLQIICDWTDYDNRMKKL 492
>SB_42515| Best HMM Match : TPR_2 (HMM E-Value=2e-14)
Length = 1104
Score = 34.3 bits (75), Expect = 0.072
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 8/87 (9%)
Frame = +2
Query: 143 KEQGNRLFSLRRYEDAKNCYTKAII---KNPS-----VATYFTNRALCHLKMKHWEATCQ 298
K++G RL+ + RY +A Y++AI K+ S +A+ NRA C ++ +
Sbjct: 419 KDEGMRLYKIGRYAEAVEKYSQAIDVLWKDKSHFKSALASLLYNRASCLGRIGDASGCVK 478
Query: 299 DCRRALDIDTNQVKGHFFLGQALVELE 379
DC +L++ + +K H + LE
Sbjct: 479 DCTSSLNLIPDSLKAHLKRAEQFEHLE 505
Score = 29.5 bits (63), Expect = 2.0
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Frame = +2
Query: 62 ENIAVNKNWFKMSKHMYSTANLTDKEL-------KEQGNRLFSLRRYEDAKNCYTKAIIK 220
E +N K+ ++ + A TD+EL K++GN F Y+++ YT++I
Sbjct: 186 EKARINTREAKLPTNVKTPAK-TDQELTFLANREKDKGNDAFRSGDYKESLVYYTRSIEL 244
Query: 221 NPSVATYFTNRALCHLKMK 277
P+ A+Y NRA+ +K
Sbjct: 245 KPTAASY-NNRAMAVRNVK 262
>SB_43858| Best HMM Match : TPR_2 (HMM E-Value=0.0013)
Length = 517
Score = 33.9 bits (74), Expect = 0.095
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 25/106 (23%)
Frame = +2
Query: 74 VNKNWFK----MSKHMYSTANLTDKE----LKEQGNRLFSLRRYEDAKNCYTKAI----- 214
+ ++W K SK+ A D E LK+ GN+ F Y +A YT A+
Sbjct: 406 IGRDWTKEETVYSKNPLQVAKQHDGEEALNLKDAGNKKFKQGCYVEAIKIYTSALEVCPP 465
Query: 215 IKNPSV------------ATYFTNRALCHLKMKHWEATCQDCRRAL 316
+K P + ++NRA C++ + W++ DC RA+
Sbjct: 466 MKRPVTRHQATAVWWVLPSVLYSNRAQCYINNRDWQSAADDCTRAI 511
>SB_35100| Best HMM Match : TPR_2 (HMM E-Value=0.0013)
Length = 158
Score = 33.9 bits (74), Expect = 0.095
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 25/106 (23%)
Frame = +2
Query: 74 VNKNWFK----MSKHMYSTANLTDKE----LKEQGNRLFSLRRYEDAKNCYTKAI----- 214
+ ++W K SK+ A D E LK+ GN+ F Y +A YT A+
Sbjct: 47 IGRDWTKEETVYSKNPLQVAKQHDGEEALNLKDAGNKKFKQGCYVEAIKIYTSALEVCPP 106
Query: 215 IKNPSV------------ATYFTNRALCHLKMKHWEATCQDCRRAL 316
+K P + ++NRA C++ + W++ DC RA+
Sbjct: 107 MKRPVTRHQATAVWWVLPSVLYSNRAQCYINNRDWQSAADDCTRAI 152
>SB_42049| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 231
Score = 33.1 bits (72), Expect = 0.17
Identities = 19/65 (29%), Positives = 34/65 (52%)
Frame = +2
Query: 59 SENIAVNKNWFKMSKHMYSTANLTDKELKEQGNRLFSLRRYEDAKNCYTKAIIKNPSVAT 238
+EN+ N S H + +ELK +GN+L ++++A N Y++AI + + +
Sbjct: 69 AENLQTNGG--ATSMHPTAQDRQKAEELKNEGNQLMKEEKFQEAINSYSRAIELDNTNSV 126
Query: 239 YFTNR 253
Y NR
Sbjct: 127 YPCNR 131
>SB_46974| Best HMM Match : TPR_1 (HMM E-Value=1.5e-10)
Length = 466
Score = 31.9 bits (69), Expect = 0.38
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 242 FTNRALCHLKMKHWEATCQDC 304
++NRA CHL MK ++ QDC
Sbjct: 352 YSNRAACHLHMKQYKECAQDC 372
>SB_8404| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 1981
Score = 31.5 bits (68), Expect = 0.51
Identities = 21/87 (24%), Positives = 44/87 (50%)
Frame = +2
Query: 179 YEDAKNCYTKAIIKNPSVATYFTNRALCHLKMKHWEATCQDCRRALDIDTNQVKGHFFLG 358
++ A Y++AI +P+ + NR+ ++ E +D ++A +++ K H+ G
Sbjct: 38 FQKAVELYSEAIKLDPNNHVLYGNRSAACIRTWQLEQALEDGKKAAELNPLWPKAHYRQG 97
Query: 359 QALVELECYDEAIKHLHRANDLAREQK 439
AL + + EA+ A LA+++K
Sbjct: 98 VALQCMGRHAEALAAF--ATALAQDEK 122
>SB_25367| Best HMM Match : TPR_1 (HMM E-Value=2.4e-40)
Length = 553
Score = 30.3 bits (65), Expect = 1.2
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +2
Query: 176 RYEDAKNCYTKAIIKNPSVA-TYFTNRALCHLKMKHWEATCQDCRRALDIDTNQVKGHFF 352
+YE+A +CY +A++ PS A TY + L+ KH EA +AL I +
Sbjct: 456 KYEEALSCYQQALVLIPSKASTYSAIGFVYSLQGKHLEAV-DYFHKALGIQRDDTFSIHM 514
Query: 353 LGQALVEL 376
L L +L
Sbjct: 515 LSTTLEQL 522
>SB_24457| Best HMM Match : TPR_2 (HMM E-Value=1.4e-16)
Length = 1134
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/30 (53%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +2
Query: 149 QGNRLFSLRR-YEDAKNCYTKAIIKNPSVA 235
Q R+F +R DAK CYT AI NPS A
Sbjct: 709 QRGRVFEIRGGLNDAKTCYTNAISINPSHA 738
>SB_13550| Best HMM Match : rve (HMM E-Value=3.4e-08)
Length = 241
Score = 29.9 bits (64), Expect = 1.5
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +2
Query: 452 DDIAAQLRTARKKRWNVQEEKRI 520
DD +++L ++K+WNV EE R+
Sbjct: 10 DDFSSKLEELKEKKWNVDEEGRV 32
>SB_11364| Best HMM Match : TPR_2 (HMM E-Value=3e-06)
Length = 357
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Frame = +2
Query: 128 TDKELKEQGNRLFSLRRYEDAKNCYTKAIIKNPS-----VATYFTNRALCHLKMKHWEAT 292
T L+ +GN F R+ A YT++I+ PS ++ + NR+ MK +E
Sbjct: 66 TAASLRNEGNTYFQKRQLGRALEVYTQSILVAPSTDLKVLSLAYANRSAVLFHMKEYELC 125
Query: 293 CQD 301
+D
Sbjct: 126 LRD 128
>SB_41027| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 153
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -1
Query: 530 FLGLSFSPLVHSISSSVLCVAVQLC 456
FLG+ SP+ S SS+LC A++ C
Sbjct: 77 FLGIDGSPVSRSTFSSLLCQAIKYC 101
>SB_37246| Best HMM Match : RVT_1 (HMM E-Value=3.6e-05)
Length = 843
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -1
Query: 530 FLGLSFSPLVHSISSSVLCVAVQLC 456
FLG+ SP+ S SS+LC A++ C
Sbjct: 767 FLGIDGSPVSRSTFSSLLCQAIKYC 791
>SB_30545| Best HMM Match : Phage_integrase (HMM E-Value=0.1)
Length = 311
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -1
Query: 530 FLGLSFSPLVHSISSSVLCVAVQLC 456
FLG+ SP+ S SS+LC A++ C
Sbjct: 235 FLGIDGSPVSRSTFSSLLCQAIKYC 259
>SB_51502| Best HMM Match : TPR_2 (HMM E-Value=0)
Length = 1161
Score = 28.7 bits (61), Expect = 3.6
Identities = 24/105 (22%), Positives = 46/105 (43%), Gaps = 12/105 (11%)
Frame = +2
Query: 146 EQGNRLFSLRRYEDAKNCYTKA--IIK-NPSVATYFTNRAL---CHLKMKHWEATCQDCR 307
E G F + +YE+A +CYT A I K N + T L H ++ + + ++ +
Sbjct: 112 EAGGTFFKIAQYENAMSCYTAAMEIAKSNDDIQTQAACYRLMGEIHCRLHDYNKSMENSQ 171
Query: 308 RALDI------DTNQVKGHFFLGQALVELECYDEAIKHLHRANDL 424
AL + ++ Q + +G Y++A+ + +A L
Sbjct: 172 HALSLFKKTVDESGQANAYLGMGSVHFNQGKYEDAMNNYQQALSL 216
>SB_17634| Best HMM Match : TPR_2 (HMM E-Value=0.06)
Length = 118
Score = 25.8 bits (54), Expect(2) = 3.8
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 140 LKEQGNRLFSLRRYEDAKNCYTKAII 217
LKE+GN F + Y +A Y +A++
Sbjct: 35 LKEEGNGCFKQKNYREAMKKYHRAML 60
Score = 21.4 bits (43), Expect(2) = 3.8
Identities = 6/23 (26%), Positives = 10/23 (43%)
Frame = +2
Query: 242 FTNRALCHLKMKHWEATCQDCRR 310
+ N A CH + W C++
Sbjct: 96 YNNLAACHFETGRWPKVVDYCKK 118
>SB_59121| Best HMM Match : TPR_1 (HMM E-Value=7.4e-10)
Length = 154
Score = 28.3 bits (60), Expect = 4.7
Identities = 19/90 (21%), Positives = 41/90 (45%)
Frame = +2
Query: 146 EQGNRLFSLRRYEDAKNCYTKAIIKNPSVATYFTNRALCHLKMKHWEATCQDCRRALDID 325
E+G L L+R+E+A YT + + + C+ K+K+ + Q + + D
Sbjct: 5 ERGKVLEKLKRFEEAIENYTLTLKLDEPTSFALLRIGSCYEKLKNDDLAVQYYYKTVHED 64
Query: 326 TNQVKGHFFLGQALVELECYDEAIKHLHRA 415
KG + + + + +AI ++++A
Sbjct: 65 PLLDKGWIAITDFYIRQKNFQKAIYYVNKA 94
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
Frame = -2
Query: 340 FDLVCINVKGPS----TILTCCLPVFHFEMTKGTVCEVCG 233
+D+ + + P+ TI CLP + ++T GT+C V G
Sbjct: 377 YDIAIMKLANPAPIGHTISPACLPGLYDQVTSGTMCYVTG 416
>SB_19968| Best HMM Match : TPR_2 (HMM E-Value=1.1e-39)
Length = 604
Score = 28.3 bits (60), Expect = 4.7
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 146 EQGNRLFSLRRYEDAKNCYTKAI 214
E G+ F + +YE+A +CYT A+
Sbjct: 35 EAGDTFFKIAQYENAMSCYTAAM 57
>SB_51523| Best HMM Match : TPR_2 (HMM E-Value=0.00012)
Length = 182
Score = 27.9 bits (59), Expect = 6.2
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 146 EQGNRLFSLRRYEDAKNCYTKAI 214
E G F + +YE+A +CYT A+
Sbjct: 102 EAGGTFFKIAQYENAMSCYTAAM 124
>SB_16367| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 635
Score = 27.9 bits (59), Expect = 6.2
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 146 EQGNRLFSLRRYEDAKNCYTKAI 214
E G F + +YE+A +CYT A+
Sbjct: 102 EAGGTFFKIAQYENAMSCYTAAM 124
>SB_3059| Best HMM Match : REJ (HMM E-Value=4.8e-06)
Length = 2009
Score = 27.9 bits (59), Expect = 6.2
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 8/72 (11%)
Frame = +2
Query: 113 STANLTDKELKEQGNRLFSLRRYEDAKNCYTKAIIK-NPSVATYFTNRALCHLKMK---- 277
ST L KE E + +F L+ +DA+ +T+ +IK P + + L + K K
Sbjct: 1744 STIGLPLKEFLEGASYVFRLKILKDARTAFTEQVIKIVPEASPEIVIKCLRNCKEKVNPQ 1803
Query: 278 ---HWEATCQDC 304
EA+C++C
Sbjct: 1804 DRLILEASCKNC 1815
>SB_56862| Best HMM Match : TPR_2 (HMM E-Value=1.4e-22)
Length = 300
Score = 27.9 bits (59), Expect = 6.2
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 146 EQGNRLFSLRRYEDAKNCYTKAI 214
E G F++ +YE A +CYT A+
Sbjct: 73 EAGGTFFNIAQYESAMSCYTAAM 95
>SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35)
Length = 929
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/60 (23%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
Frame = +2
Query: 35 IRTSYNVISENIAVNKNWFKMSKHM--YSTANLTDKELKEQGNRLFSLRRYEDAKNCYTK 208
+RT+Y+VI EN++ +W + + Y D K G + +D K
Sbjct: 794 VRTNYSVIVENLSSRTSWQDLKDYFRKYGKVTYADAHKKRIGEGVVEFESKDDLNTAIEK 853
>SB_34103| Best HMM Match : TPR_1 (HMM E-Value=5.6e-23)
Length = 290
Score = 27.5 bits (58), Expect = 8.2
Identities = 17/61 (27%), Positives = 23/61 (37%)
Frame = +2
Query: 260 CHLKMKHWEATCQDCRRALDIDTNQVKGHFFLGQALVELECYDEAIKHLHRANDLAREQK 439
CH + H C + R N + +G +ECYDE +K D E K
Sbjct: 94 CHERHLHLAKGCNNARSEKRAYCNLGCTYRRIGSLDNAIECYDEGLKLAKELGDRTGEGK 153
Query: 440 L 442
L
Sbjct: 154 L 154
>SB_22125| Best HMM Match : TPR_1 (HMM E-Value=7.7e-13)
Length = 452
Score = 27.5 bits (58), Expect = 8.2
Identities = 28/120 (23%), Positives = 51/120 (42%), Gaps = 6/120 (5%)
Frame = +2
Query: 101 KHMYSTANLT-DKELKEQGNRLFSLRRYEDAKNCYTKAIIKNPSVATYFTNRALCHLK-- 271
K +++T N + DKE+ + L +DA + +TK I ++P V + F R ++K
Sbjct: 40 KKLFTTGNNSVDKEVAHAIS-LLGCGDIDDAISYFTKIIKEHPKVTSAFLGRGTAYVKKG 98
Query: 272 ---MKHWEATCQDCRRALDIDTNQVKGHFFLGQALVELECYDEAIKHLHRANDLAREQKL 442
++ +A D + +G + L + EAIK + A L +L
Sbjct: 99 IQIKENSDAAISDFSTVISHSPKNPEGWIRRAEVLSPIGRIPEAIKDISVALSLQPSAEL 158
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,537,707
Number of Sequences: 59808
Number of extensions: 379229
Number of successful extensions: 1211
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1093
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1205
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1361520496
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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