Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10g13f
(572 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97405-9|AAB53012.2| 266|Caenorhabditis elegans C-term of hsp70... 103 7e-23
AF303269-1|AAG50227.1| 266|Caenorhabditis elegans Hsp70-interac... 103 7e-23
U41533-7|AAA83170.1| 337|Caenorhabditis elegans Small glutamine... 53 1e-07
AF016422-4|AAG24172.1| 320|Caenorhabditis elegans Hypothetical ... 51 7e-07
U41007-3|AAA82267.1| 297|Caenorhabditis elegans Hypothetical pr... 48 4e-06
Z83241-3|CAB05818.1| 422|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z81120-9|CAB03349.1| 422|Caenorhabditis elegans Hypothetical pr... 46 2e-05
U77412-1|AAB63465.1| 1151|Caenorhabditis elegans O-linked GlcNAc... 45 4e-05
U21320-2|ABC71824.1| 973|Caenorhabditis elegans O-linked glcnac... 45 4e-05
U21320-1|AAA62535.2| 1151|Caenorhabditis elegans O-linked glcnac... 45 4e-05
U28739-8|AAB93452.2| 419|Caenorhabditis elegans Hypothetical pr... 44 6e-05
M98552-9|AAA28210.3| 569|Caenorhabditis elegans Hypothetical pr... 44 6e-05
AL132948-2|CAC51076.2| 496|Caenorhabditis elegans Hypothetical ... 43 1e-04
Z66494-10|CAF31472.1| 500|Caenorhabditis elegans Hypothetical p... 41 7e-04
Z66494-9|CAA91260.1| 502|Caenorhabditis elegans Hypothetical pr... 41 7e-04
U29096-3|AAA68407.1| 961|Caenorhabditis elegans Uncoordinated p... 38 0.005
AF034085-1|AAD01976.1| 961|Caenorhabditis elegans UNC-45 protein. 38 0.005
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 35 0.047
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 35 0.047
AC024811-1|AAF60776.1| 494|Caenorhabditis elegans Dnaj domain (... 35 0.047
U58763-2|AAK68876.1| 673|Caenorhabditis elegans Metaphase-to-an... 34 0.082
U14635-10|AAM81107.1| 552|Caenorhabditis elegans Abnormal dye f... 31 0.77
U14635-9|AAK84493.1| 574|Caenorhabditis elegans Abnormal dye fi... 31 0.77
Z79605-2|CAB01903.1| 342|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z67755-1|CAA91754.1| 254|Caenorhabditis elegans Hypothetical pr... 29 1.8
AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical... 29 2.3
AC006621-3|AAK68263.1| 368|Caenorhabditis elegans Hypothetical ... 29 2.3
AL132859-6|CAB60493.3| 324|Caenorhabditis elegans Hypothetical ... 28 5.4
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 27 9.5
>U97405-9|AAB53012.2| 266|Caenorhabditis elegans C-term of
hsp70-interacting protein(chip family) protein 1
protein.
Length = 266
Score = 103 bits (248), Expect = 7e-23
Identities = 52/140 (37%), Positives = 85/140 (60%)
Frame = +2
Query: 152 GNRLFSLRRYEDAKNCYTKAIIKNPSVATYFTNRALCHLKMKHWEATCQDCRRALDIDTN 331
G + + +RY+DA + Y+KAI NP + Y+ NRA+C+ ++ + + T +DC+RAL++ N
Sbjct: 12 GKKCYMNKRYDDAVDHYSKAIKVNP-LPKYYQNRAMCYFQLNNLKMTEEDCKRALELSPN 70
Query: 332 QVKGHFFLGQALVELECYDEAIKHLHRANDLAREQKLNFGDDIAAQLRTARKKRWNVQEE 511
+VK +FLG ++ + Y EAI L +A L + DI L+ AR +++ +E
Sbjct: 71 EVKPLYFLGNVFLQSKKYSEAISCLSKA--LYHNAVITNAPDIENALKRARHQKYEEEES 128
Query: 512 KRIAQEIELQTYLNRLINED 571
KRI Q++E TYL LI +D
Sbjct: 129 KRIVQDVEFHTYLESLIEKD 148
>AF303269-1|AAG50227.1| 266|Caenorhabditis elegans
Hsp70-interacting protein protein.
Length = 266
Score = 103 bits (248), Expect = 7e-23
Identities = 52/140 (37%), Positives = 85/140 (60%)
Frame = +2
Query: 152 GNRLFSLRRYEDAKNCYTKAIIKNPSVATYFTNRALCHLKMKHWEATCQDCRRALDIDTN 331
G + + +RY+DA + Y+KAI NP + Y+ NRA+C+ ++ + + T +DC+RAL++ N
Sbjct: 12 GKKCYMNKRYDDAVDHYSKAIKVNP-LPKYYQNRAMCYFQLNNLKMTEEDCKRALELSPN 70
Query: 332 QVKGHFFLGQALVELECYDEAIKHLHRANDLAREQKLNFGDDIAAQLRTARKKRWNVQEE 511
+VK +FLG ++ + Y EAI L +A L + DI L+ AR +++ +E
Sbjct: 71 EVKPLYFLGNVFLQSKKYSEAISCLSKA--LYHNAVITNAPDIENALKRARHQKYEEEES 128
Query: 512 KRIAQEIELQTYLNRLINED 571
KRI Q++E TYL LI +D
Sbjct: 129 KRIVQDVEFHTYLESLIEKD 148
>U41533-7|AAA83170.1| 337|Caenorhabditis elegans Small
glutamine-rich tetratricorepeat protein protein 1
protein.
Length = 337
Score = 53.2 bits (122), Expect = 1e-07
Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 5/121 (4%)
Frame = +2
Query: 137 ELKEQGNRLFSLRRYEDAKNCYTKAIIKNPSVATYFTNRALCHLKMKHWEATCQDCRRAL 316
+LKE+GN L ++E A Y AI N YF NRA + +++ ++ QDCR AL
Sbjct: 107 KLKEEGNDLMKASQFEAAVQKYNAAIKLNRD-PVYFCNRAAAYCRLEQYDLAIQDCRTAL 165
Query: 317 DIDTNQVKGHFFLGQALVELECYDEAIKHLHRANDLAREQK-----LNFGDDIAAQLRTA 481
+D + K +G A Y+ A + +A +L Q+ L +D +L ++
Sbjct: 166 ALDPSYSKAWGRMGLAYSCQNRYEHAAEAYKKALELEPNQESYKNNLKIAEDKLKELESS 225
Query: 482 R 484
R
Sbjct: 226 R 226
>AF016422-4|AAG24172.1| 320|Caenorhabditis elegans Hypothetical
protein R09E12.3 protein.
Length = 320
Score = 50.8 bits (116), Expect = 7e-07
Identities = 24/87 (27%), Positives = 43/87 (49%)
Frame = +2
Query: 134 KELKEQGNRLFSLRRYEDAKNCYTKAIIKNPSVATYFTNRALCHLKMKHWEATCQDCRRA 313
+E K +GN F Y A Y +A+ ++P A ++NRA C K+ ++ DC
Sbjct: 141 QEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTC 200
Query: 314 LDIDTNQVKGHFFLGQALVELECYDEA 394
+ +D+ +KG+ LV + + +A
Sbjct: 201 IRLDSKFIKGYIRKAACLVAMREWSKA 227
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/60 (30%), Positives = 33/60 (55%)
Frame = +2
Query: 143 KEQGNRLFSLRRYEDAKNCYTKAIIKNPSVATYFTNRALCHLKMKHWEATCQDCRRALDI 322
K+ GN + + +E A Y KAI +PS T++ N+A + + K + Q C +A+++
Sbjct: 9 KDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEV 68
>U41007-3|AAA82267.1| 297|Caenorhabditis elegans Hypothetical
protein C33H5.8 protein.
Length = 297
Score = 48.4 bits (110), Expect = 4e-06
Identities = 29/87 (33%), Positives = 42/87 (48%)
Frame = +2
Query: 134 KELKEQGNRLFSLRRYEDAKNCYTKAIIKNPSVATYFTNRALCHLKMKHWEATCQDCRRA 313
+ LKEQGN F ++Y A Y+K++ P F+NRA L DC A
Sbjct: 9 QRLKEQGNEAFKKKKYHKAMTIYSKSLEHWPD-PIVFSNRAQAGLNADLPLLAQIDCTAA 67
Query: 314 LDIDTNQVKGHFFLGQALVELECYDEA 394
L++D+ K ++ QA LE Y+ A
Sbjct: 68 LNLDSTAAKAYYRRAQAFKALELYELA 94
>Z83241-3|CAB05818.1| 422|Caenorhabditis elegans Hypothetical
protein T12D8.8 protein.
Length = 422
Score = 46.0 bits (104), Expect = 2e-05
Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 2/140 (1%)
Frame = +2
Query: 113 STANLTDKELKEQGN--RLFSLRRYEDAKNCYTKAIIKNPSVATYFTNRALCHLKMKHWE 286
+T + +K +E+G FS ++ A +T AI NP A RA LK+K
Sbjct: 107 ATEDEIEKASEERGKAQEAFSNGDFDTALTHFTAAIEANPGSAMLHAKRANVLLKLKRPV 166
Query: 287 ATCQDCRRALDIDTNQVKGHFFLGQALVELECYDEAIKHLHRANDLAREQKLNFGDDIAA 466
A DC +A+ I+ + +G+ F G+A L + EA DLA KL++ +
Sbjct: 167 AAIADCDKAISINPDSAQGYKFRGRANRLLGKWVEA------KTDLATACKLDYDEAANE 220
Query: 467 QLRTARKKRWNVQEEKRIAQ 526
L+ +QE R +
Sbjct: 221 WLKEVEPNAHKIQEYNRAVE 240
>Z81120-9|CAB03349.1| 422|Caenorhabditis elegans Hypothetical
protein T12D8.8 protein.
Length = 422
Score = 46.0 bits (104), Expect = 2e-05
Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 2/140 (1%)
Frame = +2
Query: 113 STANLTDKELKEQGN--RLFSLRRYEDAKNCYTKAIIKNPSVATYFTNRALCHLKMKHWE 286
+T + +K +E+G FS ++ A +T AI NP A RA LK+K
Sbjct: 107 ATEDEIEKASEERGKAQEAFSNGDFDTALTHFTAAIEANPGSAMLHAKRANVLLKLKRPV 166
Query: 287 ATCQDCRRALDIDTNQVKGHFFLGQALVELECYDEAIKHLHRANDLAREQKLNFGDDIAA 466
A DC +A+ I+ + +G+ F G+A L + EA DLA KL++ +
Sbjct: 167 AAIADCDKAISINPDSAQGYKFRGRANRLLGKWVEA------KTDLATACKLDYDEAANE 220
Query: 467 QLRTARKKRWNVQEEKRIAQ 526
L+ +QE R +
Sbjct: 221 WLKEVEPNAHKIQEYNRAVE 240
>U77412-1|AAB63465.1| 1151|Caenorhabditis elegans O-linked GlcNAc
transferase protein.
Length = 1151
Score = 44.8 bits (101), Expect = 4e-05
Identities = 28/101 (27%), Positives = 44/101 (43%)
Frame = +2
Query: 152 GNRLFSLRRYEDAKNCYTKAIIKNPSVATYFTNRALCHLKMKHWEATCQDCRRALDIDTN 331
GN L ++ R E+AK CY KAI P A ++N +A+ +D N
Sbjct: 268 GNLLKAMGRLEEAKVCYLKAIETQPQFAVAWSNLGCVFNSQGEIWLAIHHFEKAVTLDPN 327
Query: 332 QVKGHFFLGQALVELECYDEAIKHLHRANDLAREQKLNFGD 454
+ + LG L E +D A+ RA +L+ + G+
Sbjct: 328 FLDAYINLGNVLKEARIFDRAVSAYLRALNLSGNHAVVHGN 368
>U21320-2|ABC71824.1| 973|Caenorhabditis elegans O-linked glcnac
transferase protein1, isoform b protein.
Length = 973
Score = 44.8 bits (101), Expect = 4e-05
Identities = 28/101 (27%), Positives = 44/101 (43%)
Frame = +2
Query: 152 GNRLFSLRRYEDAKNCYTKAIIKNPSVATYFTNRALCHLKMKHWEATCQDCRRALDIDTN 331
GN L ++ R E+AK CY KAI P A ++N +A+ +D N
Sbjct: 90 GNLLKAMGRLEEAKVCYLKAIETQPQFAVAWSNLGCVFNSQGEIWLAIHHFEKAVTLDPN 149
Query: 332 QVKGHFFLGQALVELECYDEAIKHLHRANDLAREQKLNFGD 454
+ + LG L E +D A+ RA +L+ + G+
Sbjct: 150 FLDAYINLGNVLKEARIFDRAVSAYLRALNLSGNHAVVHGN 190
>U21320-1|AAA62535.2| 1151|Caenorhabditis elegans O-linked glcnac
transferase protein1, isoform a protein.
Length = 1151
Score = 44.8 bits (101), Expect = 4e-05
Identities = 28/101 (27%), Positives = 44/101 (43%)
Frame = +2
Query: 152 GNRLFSLRRYEDAKNCYTKAIIKNPSVATYFTNRALCHLKMKHWEATCQDCRRALDIDTN 331
GN L ++ R E+AK CY KAI P A ++N +A+ +D N
Sbjct: 268 GNLLKAMGRLEEAKVCYLKAIETQPQFAVAWSNLGCVFNSQGEIWLAIHHFEKAVTLDPN 327
Query: 332 QVKGHFFLGQALVELECYDEAIKHLHRANDLAREQKLNFGD 454
+ + LG L E +D A+ RA +L+ + G+
Sbjct: 328 FLDAYINLGNVLKEARIFDRAVSAYLRALNLSGNHAVVHGN 368
>U28739-8|AAB93452.2| 419|Caenorhabditis elegans Hypothetical
protein C17G10.2 protein.
Length = 419
Score = 44.4 bits (100), Expect = 6e-05
Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 4/98 (4%)
Frame = +2
Query: 143 KEQGNRLFSLRRYEDAKNCYTKAIIKNPS----VATYFTNRALCHLKMKHWEATCQDCRR 310
KE+GN+ F ++Y A +CY+ I +N A + NRA + + + +DC
Sbjct: 99 KEEGNKHFKFKKYRWATDCYSNGIKENSPDRKLNAVLYFNRAAAQKHLGNLRSAIKDCSM 158
Query: 311 ALDIDTNQVKGHFFLGQALVELECYDEAIKHLHRANDL 424
D +KG + L+ELE +A+ + + +
Sbjct: 159 GRKFDPTHLKGVIRGAECLLELEYAKDALNWIESSKKI 196
>M98552-9|AAA28210.3| 569|Caenorhabditis elegans Hypothetical
protein ZK370.8 protein.
Length = 569
Score = 44.4 bits (100), Expect = 6e-05
Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 8/113 (7%)
Frame = +2
Query: 134 KELKEQGNRLFSLRRYEDAKNCYTKAIIK---NPS---VATYFTNRALCHLKMKHWE-AT 292
+E+K GN F ++Y+ A +TK + K N S VA + NRA C K+ H
Sbjct: 45 EEIKALGNLKFKEKQYDSALEAFTKGVEKAGPNSSDQIVAMLYQNRAACREKVGHSPFDI 104
Query: 293 CQDCRRALDIDTNQVKGHFFLGQALVELECYDEAIKHLHRANDL-AREQKLNF 448
DC AL +D K + +AL ++ +A+ +L A L + K NF
Sbjct: 105 LNDCMAALKVDKKYTKAYLRAAKALNDVGKKQDALAYLLAAFTLDSSLNKTNF 157
>AL132948-2|CAC51076.2| 496|Caenorhabditis elegans Hypothetical
protein Y39B6A.2 protein.
Length = 496
Score = 43.2 bits (97), Expect = 1e-04
Identities = 25/86 (29%), Positives = 47/86 (54%)
Frame = +2
Query: 140 LKEQGNRLFSLRRYEDAKNCYTKAIIKNPSVATYFTNRALCHLKMKHWEATCQDCRRALD 319
+K++ N+ F + Y+ A + Y+ AI +P+ Y NRA +LK + + + +D A+
Sbjct: 32 IKDEANQFFKDQVYDVAADLYSVAIEIHPTAVLY-GNRAQAYLKKELYGSALEDADNAIA 90
Query: 320 IDTNQVKGHFFLGQALVELECYDEAI 397
ID + VKG + A + L + +A+
Sbjct: 91 IDPSYVKGFYRRATANMALGRFKKAL 116
>Z66494-10|CAF31472.1| 500|Caenorhabditis elegans Hypothetical
protein C34C6.6b protein.
Length = 500
Score = 40.7 bits (91), Expect = 7e-04
Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 1/127 (0%)
Frame = +2
Query: 131 DKELKEQGNRLFSLRR-YEDAKNCYTKAIIKNPSVATYFTNRALCHLKMKHWEATCQDCR 307
D +L+ L++L R + A + AI KNP+ A + H R
Sbjct: 357 DPDLQNALGVLYNLNRNFARAVDSLKLAISKNPTDARLWNRLGATLANGDHTAEAISAYR 416
Query: 308 RALDIDTNQVKGHFFLGQALVELECYDEAIKHLHRANDLAREQKLNFGDDIAAQLRTARK 487
AL + V+ + LG + ++L YDEA+KH A +L ++ N I +R+A
Sbjct: 417 EALKLYPTYVRARYNLGISCMQLSSYDEALKHFLSALEL--QKGGNDASGIWTTMRSAAI 474
Query: 488 KRWNVQE 508
+ NV +
Sbjct: 475 RTSNVPD 481
>Z66494-9|CAA91260.1| 502|Caenorhabditis elegans Hypothetical
protein C34C6.6a protein.
Length = 502
Score = 40.7 bits (91), Expect = 7e-04
Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 1/127 (0%)
Frame = +2
Query: 131 DKELKEQGNRLFSLRR-YEDAKNCYTKAIIKNPSVATYFTNRALCHLKMKHWEATCQDCR 307
D +L+ L++L R + A + AI KNP+ A + H R
Sbjct: 359 DPDLQNALGVLYNLNRNFARAVDSLKLAISKNPTDARLWNRLGATLANGDHTAEAISAYR 418
Query: 308 RALDIDTNQVKGHFFLGQALVELECYDEAIKHLHRANDLAREQKLNFGDDIAAQLRTARK 487
AL + V+ + LG + ++L YDEA+KH A +L ++ N I +R+A
Sbjct: 419 EALKLYPTYVRARYNLGISCMQLSSYDEALKHFLSALEL--QKGGNDASGIWTTMRSAAI 476
Query: 488 KRWNVQE 508
+ NV +
Sbjct: 477 RTSNVPD 483
>U29096-3|AAA68407.1| 961|Caenorhabditis elegans Uncoordinated
protein 45 protein.
Length = 961
Score = 37.9 bits (84), Expect = 0.005
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Frame = +2
Query: 128 TDKELKEQGNRLFSLRRYEDAKNCYTKAIIKNPSV-----ATYFTNRALCHLKMKHWEAT 292
T +E++++GN + Y A YT+A+ + NRA+ LK +E
Sbjct: 7 TAEEIRDEGNAAVKDQDYIKADELYTEALQLTTDEDKALRPVLYRNRAMARLKRDDFEGA 66
Query: 293 CQDCRRALDIDTNQVKGHF 349
DC +AL+ D VK F
Sbjct: 67 QSDCTKALEFDGADVKALF 85
>AF034085-1|AAD01976.1| 961|Caenorhabditis elegans UNC-45 protein.
Length = 961
Score = 37.9 bits (84), Expect = 0.005
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Frame = +2
Query: 128 TDKELKEQGNRLFSLRRYEDAKNCYTKAIIKNPSV-----ATYFTNRALCHLKMKHWEAT 292
T +E++++GN + Y A YT+A+ + NRA+ LK +E
Sbjct: 7 TAEEIRDEGNAAVKDQDYIKADELYTEALQLTTDEDKALRPVLYRNRAMARLKRDDFEGA 66
Query: 293 CQDCRRALDIDTNQVKGHF 349
DC +AL+ D VK F
Sbjct: 67 QSDCTKALEFDGADVKALF 85
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 34.7 bits (76), Expect = 0.047
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = +2
Query: 38 RTSYNVISENIAVNKNWFKMSKHMYSTANLTDKELKEQGNRLFSLRRYEDAKNCYTK 208
RT Y VI E + +W + HM ++ ++ G + RYED K K
Sbjct: 120 RTGYRVIVEGLPPTGSWQDLKDHMRDAGDVCYADVARDGTGVVEFTRYEDVKYAVRK 176
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 34.7 bits (76), Expect = 0.047
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = +2
Query: 38 RTSYNVISENIAVNKNWFKMSKHMYSTANLTDKELKEQGNRLFSLRRYEDAKNCYTK 208
RT Y VI E + +W + HM ++ ++ G + RYED K K
Sbjct: 120 RTGYRVIVEGLPPTGSWQDLKDHMRDAGDVCYADVARDGTGVVEFTRYEDVKYAVRK 176
>AC024811-1|AAF60776.1| 494|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 28 protein.
Length = 494
Score = 34.7 bits (76), Expect = 0.047
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +2
Query: 107 MYSTANLTDKELK-EQGNRLFSLRRYEDAKNCYTKAIIKNPSVATYFTNRALCHL 268
+YS + T+ + + E GN LF R+Y DA Y KAI NP++ RA +L
Sbjct: 15 IYSLDDKTEAQREYEAGNALFVNRQYSDALTHYHKAIELNPTMYQAIFRRATTYL 69
>U58763-2|AAK68876.1| 673|Caenorhabditis elegans
Metaphase-to-anaphase transitiondefect protein 3
protein.
Length = 673
Score = 33.9 bits (74), Expect = 0.082
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = +2
Query: 173 RRYEDAKNCYTKAIIKNPSVATYFTNRALCHLKMKHWEATCQDCRRALDIDTNQVKGHFF 352
R E A + +A+ NP +A + ++MK+ A C RRA++ID +G +
Sbjct: 414 RDSEHAIKFFQRALRLNPGLAALWVLIGHEFMEMKNNAAACVSYRRAIEIDPADHRGWYG 473
Query: 353 LGQ 361
LGQ
Sbjct: 474 LGQ 476
>U14635-10|AAM81107.1| 552|Caenorhabditis elegans Abnormal dye
filling protein 13,isoform b protein.
Length = 552
Score = 30.7 bits (66), Expect = 0.77
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 164 FSLRRYEDAKNCYTKAIIKNPSVATYFTNRALCHLKMKH 280
+S Y+DA YT + +P++ N ALC+ KM +
Sbjct: 140 YSRMHYQDAIEVYTSVLQTSPNLIGLNVNMALCYAKMDY 178
>U14635-9|AAK84493.1| 574|Caenorhabditis elegans Abnormal dye
filling protein 13,isoform a protein.
Length = 574
Score = 30.7 bits (66), Expect = 0.77
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 164 FSLRRYEDAKNCYTKAIIKNPSVATYFTNRALCHLKMKH 280
+S Y+DA YT + +P++ N ALC+ KM +
Sbjct: 162 YSRMHYQDAIEVYTSVLQTSPNLIGLNVNMALCYAKMDY 200
>Z79605-2|CAB01903.1| 342|Caenorhabditis elegans Hypothetical
protein ZK678.2 protein.
Length = 342
Score = 29.9 bits (64), Expect = 1.3
Identities = 11/22 (50%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = +2
Query: 245 TNRALCH-LKMKHWEATCQDCR 307
+NR LCH KM W++ C+ CR
Sbjct: 48 SNRNLCHKTKMSTWKSACKSCR 69
>Z67755-1|CAA91754.1| 254|Caenorhabditis elegans Hypothetical
protein F54F7.1 protein.
Length = 254
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = +2
Query: 413 ANDLAREQ--KLNFGDDIAAQLRTARKKRWNVQEEKRIAQEIELQTYLNRLINED 571
A LA+E+ + ++ I ++ A+K+R+ ++EK+ E++ L RL+ D
Sbjct: 150 ARQLAKEKVKEYHYPHGITPPMKNAKKRRFRKKKEKKTMAVEEIEIELKRLLRSD 204
>AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical
protein Y51A2D.15 protein.
Length = 1222
Score = 29.1 bits (62), Expect = 2.3
Identities = 41/162 (25%), Positives = 72/162 (44%), Gaps = 5/162 (3%)
Frame = +2
Query: 101 KHMYSTANLTDKELKEQGNRLFSLRRYEDAK--NCYTKAIIKN-PSVATYFTNRALCHLK 271
++M+ T + L++ N L R Y++AK + + ++N P F N + L+
Sbjct: 879 ENMHKTLLVDHSRLQQLHNLL--TRDYDEAKKESMELRQKVQNIPRQQAVFMNANIRELE 936
Query: 272 MKHWEATCQDCRRALDIDTNQVKGHFF-LGQALVEL-ECYDEAIKHLHRANDLAREQKLN 445
K E + R L+ + + H L + + EL + DE L RA+D K N
Sbjct: 937 AKLSEEISR--REQLEKEHKMCRIHCENLRRDITELVQTRDELSLELRRAHDTCHN-KNN 993
Query: 446 FGDDIAAQLRTARKKRWNVQEEKRIAQEIELQTYLNRLINED 571
D++ QL + E +++ +IE + LNR NE+
Sbjct: 994 QIDELKKQLNQ------KISEVNKLSSKIEALSQLNRTYNEE 1029
>AC006621-3|AAK68263.1| 368|Caenorhabditis elegans Hypothetical
protein C52A10.3 protein.
Length = 368
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = -3
Query: 507 SCTFHLFFRAVRSCAAMSSPKFSFCSRARSFALCR 403
S +LF R VR A S +SFC R +SF L R
Sbjct: 2 SLVSNLFQRTVRFFQAYHSLLYSFCRREKSFHLLR 36
>AL132859-6|CAB60493.3| 324|Caenorhabditis elegans Hypothetical
protein Y39C12A.7 protein.
Length = 324
Score = 27.9 bits (59), Expect = 5.4
Identities = 23/98 (23%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Frame = -2
Query: 547 ICLQFNFLGYPFLLLYIPSLLPCCA*LCSYVITEI*LLLTSQII-CSMQMLDGFIITFKF 371
+C QF+ YPFL+L++ +++ SY++ I L CS++ L + +T ++
Sbjct: 135 VCTQFSTTFYPFLVLFMSNII-------SYIVNIINYKLNRYYYNCSLRKLHTYSLTERY 187
Query: 370 NQSLS-QKEMSFDLVCINVKGPSTILTCCLPVFHFEMT 260
S + Q F + + V +T+ + L + T
Sbjct: 188 QISENIQFAKFFHIFALTVAVFATVCSLLLMLTSLSFT 225
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -2
Query: 295 TCCLPVFHFEMTKGTVCEVCGH*WIFYNSFCIAIL 191
T P F+ +K TV +C W++YN+ C A L
Sbjct: 315 TTTTPKTPFDTSKCTV--MCSTGWVYYNNLCYAKL 347
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,251,023
Number of Sequences: 27780
Number of extensions: 297549
Number of successful extensions: 1000
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 964
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 989
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1184216096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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