Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10g10r
         (508 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6BYX8 Cluster: Putative inner membrane protein; n=1; P...    35   0.92 
UniRef50_A0Z076 Cluster: Putative uncharacterized protein; n=1; ...    35   1.2  
UniRef50_Q689Z6 Cluster: Asparagine-rich cocoon silk protein; n=...    34   1.6  
UniRef50_A0G452 Cluster: Filamentous haemagglutinin family outer...    33   3.7  
UniRef50_Q8IRB3 Cluster: CG32241-PA; n=1; Drosophila melanogaste...    33   3.7  
UniRef50_Q20576 Cluster: Putative uncharacterized protein pqn-39...    32   6.5  
UniRef50_A6GBC3 Cluster: Peptidase S9B, dipeptidylpeptidase IV d...    32   8.6  
UniRef50_Q2H6R4 Cluster: Predicted protein; n=1; Chaetomium glob...    32   8.6  
UniRef50_Q18211 Cluster: Regulator of chromosome condensation; n...    32   8.6  

>UniRef50_A6BYX8 Cluster: Putative inner membrane protein; n=1;
            Planctomyces maris DSM 8797|Rep: Putative inner membrane
            protein - Planctomyces maris DSM 8797
          Length = 5594

 Score = 35.1 bits (77), Expect = 0.92
 Identities = 17/56 (30%), Positives = 31/56 (55%)
 Frame = +2

Query: 176  DNNGVGLDFSGSIRNTSGNVDVHDELHKRRGTGGNSRSNDNRSGLHGSSHYTTVSD 343
            D    G + S  +  +SGN  VHDE   +  + G+ +S D+R+ ++GS   T +++
Sbjct: 4038 DRYSAGAETSNEL-TSSGNSHVHDEYRTQNVSSGSHQSVDSRTPVNGSKSVTVIAN 4092


>UniRef50_A0Z076 Cluster: Putative uncharacterized protein; n=1;
           Lyngbya sp. PCC 8106|Rep: Putative uncharacterized
           protein - Lyngbya sp. PCC 8106
          Length = 981

 Score = 34.7 bits (76), Expect = 1.2
 Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 1/102 (0%)
 Frame = +2

Query: 164 SLFGDNNGVGLDFSGSIRNTSGNVDVHDELHKRRGTGGNSRSNDNRSGLHGSSHYTTVSD 343
           S  G N+G G  F  +  N+ GN+D   E ++  GTG ++  +DN++  +G++ +     
Sbjct: 289 SFGGGNSGGGGGFGSNTPNSGGNIDT-GENNENLGTGNSAFGSDNQTEGNGNNAF----G 343

Query: 344 RXXXXXXXXXXXXXXXXECRSNGNR-FKDTGRSHGDQGEGNE 466
                            +   NGNR F + G    +  EG E
Sbjct: 344 DGNSTNGNGNTDFGSNNQTEGNGNRSFGEGGEGFNEIFEGRE 385


>UniRef50_Q689Z6 Cluster: Asparagine-rich cocoon silk protein; n=1;
           Cotesia glomerata|Rep: Asparagine-rich cocoon silk
           protein - Cotesia glomerata
          Length = 255

 Score = 34.3 bits (75), Expect = 1.6
 Identities = 20/97 (20%), Positives = 36/97 (37%), Gaps = 2/97 (2%)
 Frame = +2

Query: 179 NNGVGLD-FSGSIRNTSGNVDVHDELHKRRGTGGNSRSNDN-RSGLHGSSHYTTVSDRXX 352
           N+G   + +S S  N++ N D +   +   G  GNS SN N  S  +  ++  + S+   
Sbjct: 85  NSGANANSYSNSNSNSNANSDANSNSYSNSGANGNSNSNSNSNSNANSDANSNSYSNSGS 144

Query: 353 XXXXXXXXXXXXXXECRSNGNRFKDTGRSHGDQGEGN 463
                            +N N + ++G         N
Sbjct: 145 NADSNANSDSNSNANSDANSNSYSNSGAYANSNANSN 181


>UniRef50_A0G452 Cluster: Filamentous haemagglutinin family outer
            membrane protein; n=1; Burkholderia phymatum STM815|Rep:
            Filamentous haemagglutinin family outer membrane protein
            - Burkholderia phymatum STM815
          Length = 2782

 Score = 33.1 bits (72), Expect = 3.7
 Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
 Frame = +2

Query: 140  DRDNGALFSLFGDNNGVGLDFSGSIRNTSGNVDVHDELHKRRG--TGGNSRSNDNRSGLH 313
            D  NG + +L G N  V +  +G++ NTSG +     L       TGG + S  N   ++
Sbjct: 883  DNSNGQIGNLTGSNGDVTIAATGALTNTSGQIGATHNLSVNAAGLTGGGAYSAANDVAIN 942

Query: 314  GSSHYTTVSD 343
               ++    D
Sbjct: 943  VQGNFAPTPD 952


>UniRef50_Q8IRB3 Cluster: CG32241-PA; n=1; Drosophila
           melanogaster|Rep: CG32241-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 440

 Score = 33.1 bits (72), Expect = 3.7
 Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
 Frame = -1

Query: 478 KMKFLVAFALIAVASARVFEPISVGPALVDT---YEPIDTEPAYVDIP 344
           K KFL+AFAL+AVASA V    S    L +    Y P  + P  +D+P
Sbjct: 25  KQKFLIAFALVAVASADVSHLFSNSNNLQEDGYHYAP-PSAPVVIDVP 71


>UniRef50_Q20576 Cluster: Putative uncharacterized protein pqn-39;
           n=1; Caenorhabditis elegans|Rep: Putative
           uncharacterized protein pqn-39 - Caenorhabditis elegans
          Length = 925

 Score = 32.3 bits (70), Expect = 6.5
 Identities = 18/59 (30%), Positives = 29/59 (49%)
 Frame = +2

Query: 149 NGALFSLFGDNNGVGLDFSGSIRNTSGNVDVHDELHKRRGTGGNSRSNDNRSGLHGSSH 325
           N +  +L   +NG   + SGS+RN   N +  +   K RG  GN++   N +  H  +H
Sbjct: 535 NSSTSALTPRSNGQKKETSGSVRNEGSNNNSQNRNTKYRGAVGNNQHMYNGNEGHSGAH 593


>UniRef50_A6GBC3 Cluster: Peptidase S9B, dipeptidylpeptidase IV
           domain protein; n=1; Plesiocystis pacifica SIR-1|Rep:
           Peptidase S9B, dipeptidylpeptidase IV domain protein -
           Plesiocystis pacifica SIR-1
          Length = 842

 Score = 31.9 bits (69), Expect = 8.6
 Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
 Frame = +2

Query: 137 RDRDNGAL-FSLFGDNNGV---GLDFSGSIRNTSGNVDVHDELHKRRGTGGNSRSNDNRS 304
           R RD+G L F L  DN G    GL F G++R+  GNV+V D++           ++ +R 
Sbjct: 647 RLRDHGYLVFKL--DNRGAARRGLAFEGALRHDMGNVEVQDQVAGVNWLVEQGLTDKDRV 704

Query: 305 GLHGSSH 325
            ++G S+
Sbjct: 705 AIYGWSY 711


>UniRef50_Q2H6R4 Cluster: Predicted protein; n=1; Chaetomium
           globosum|Rep: Predicted protein - Chaetomium globosum
           (Soil fungus)
          Length = 490

 Score = 31.9 bits (69), Expect = 8.6
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +2

Query: 218 NTSGNVDVHDELHKRRGTGGNSRSNDNRSGLHGSSHYTTVSDR 346
           N + N   H   H+RR + G    +D R  +HGS+ ++ +  R
Sbjct: 381 NNNNNNHTHTHTHQRRQSEGLGTRHDARGYMHGSTEHSAIPPR 423


>UniRef50_Q18211 Cluster: Regulator of chromosome condensation; n=2;
           Caenorhabditis|Rep: Regulator of chromosome condensation
           - Caenorhabditis elegans
          Length = 569

 Score = 31.9 bits (69), Expect = 8.6
 Identities = 12/18 (66%), Positives = 16/18 (88%)
 Frame = +2

Query: 206 GSIRNTSGNVDVHDELHK 259
           G++RN++GNVDVH  LHK
Sbjct: 269 GNLRNSNGNVDVHPLLHK 286


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 287,414,871
Number of Sequences: 1657284
Number of extensions: 3744591
Number of successful extensions: 16698
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14351
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16373
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30528237263
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)