Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10g10r
         (508 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ118293-1|AAZ99029.1| 2391|Homo sapiens filaggrin 2 protein.          30   4.0  
AY827490-1|AAX12417.1| 2391|Homo sapiens ifapsoriasin protein.         30   4.0  
AL356504-2|CAC13173.2| 2391|Homo sapiens filaggrin 2 protein.          30   4.0  
AK125767-1|BAC86280.1|  168|Homo sapiens protein ( Homo sapiens ...    29   7.1  

>DQ118293-1|AAZ99029.1| 2391|Homo sapiens filaggrin 2 protein.
          Length = 2391

 Score = 30.3 bits (65), Expect = 4.0
 Identities = 17/93 (18%), Positives = 31/93 (33%)
 Frame = +2

Query: 206  GSIRNTSGNVDVHDELHKRRGTGGNSRSNDNRSGLHGSSHYTTVSDRXXXXXXXXXXXXX 385
            G+I   +G+   H +    + T   SR+   +   H  S  + V                
Sbjct: 2145 GTIHGQTGDTTRHGQSGHGQSTQTGSRTTGRQRSSHSESSDSEVHSEASPTHSGHTHSQA 2204

Query: 386  XXXECRSNGNRFKDTGRSHGDQGEGNEEFHFGF 484
                 +S  +     G +HG  G+     H+G+
Sbjct: 2205 GSRHGQSGSSGHGRQGTTHGQTGDTTRHAHYGY 2237


>AY827490-1|AAX12417.1| 2391|Homo sapiens ifapsoriasin protein.
          Length = 2391

 Score = 30.3 bits (65), Expect = 4.0
 Identities = 17/93 (18%), Positives = 31/93 (33%)
 Frame = +2

Query: 206  GSIRNTSGNVDVHDELHKRRGTGGNSRSNDNRSGLHGSSHYTTVSDRXXXXXXXXXXXXX 385
            G+I   +G+   H +    + T   SR+   +   H  S  + V                
Sbjct: 2145 GTIHGQTGDTTRHGQSGHGQSTQTGSRTTGRQRSSHSESSDSEVHSEASPTHSGHTHSQA 2204

Query: 386  XXXECRSNGNRFKDTGRSHGDQGEGNEEFHFGF 484
                 +S  +     G +HG  G+     H+G+
Sbjct: 2205 GSRHGQSGSSGHGRQGTTHGQTGDTTRHAHYGY 2237


>AL356504-2|CAC13173.2| 2391|Homo sapiens filaggrin 2 protein.
          Length = 2391

 Score = 30.3 bits (65), Expect = 4.0
 Identities = 17/93 (18%), Positives = 31/93 (33%)
 Frame = +2

Query: 206  GSIRNTSGNVDVHDELHKRRGTGGNSRSNDNRSGLHGSSHYTTVSDRXXXXXXXXXXXXX 385
            G+I   +G+   H +    + T   SR+   +   H  S  + V                
Sbjct: 2145 GTIHGQTGDTTRHGQSGHGQSTQTGSRTTGRQRSSHSESSDSEVHSEASPTHSGHTHSQA 2204

Query: 386  XXXECRSNGNRFKDTGRSHGDQGEGNEEFHFGF 484
                 +S  +     G +HG  G+     H+G+
Sbjct: 2205 GSRHGQSGSSGHGRQGTTHGQTGDTTRHAHYGY 2237


>AK125767-1|BAC86280.1|  168|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43779 fis, clone TESTI2051488. ).
          Length = 168

 Score = 29.5 bits (63), Expect = 7.1
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +2

Query: 227 GNVDVHDELHKRRGTGGNSRSNDNRSGLHGS 319
           GN   H   H  R  GG+SRS +  S LH S
Sbjct: 73  GNSPSHSHSHTSRRCGGSSRSRECCSSLHSS 103


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,168,973
Number of Sequences: 237096
Number of extensions: 478642
Number of successful extensions: 1220
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1220
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4706589866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)