Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10g06r
(732 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069315-1|AAL39460.1| 119|Drosophila melanogaster LD03002p pro... 182 4e-46
AE014297-442|AAF54135.1| 119|Drosophila melanogaster CG1249-PA ... 182 4e-46
BT001552-1|AAN71307.1| 103|Drosophila melanogaster RE11655p pro... 50 3e-06
AE014297-3433|AAN13967.1| 103|Drosophila melanogaster CG31184-P... 50 3e-06
L02919-1|AAA28858.1| 199|Drosophila melanogaster ribonucleoprot... 31 2.1
AY061171-1|AAL28719.1| 199|Drosophila melanogaster LD14049p pro... 31 2.1
AE014134-1881|AAF52947.1| 199|Drosophila melanogaster CG5352-PA... 31 2.1
AY113521-1|AAM29526.1| 91|Drosophila melanogaster RE60135p pro... 29 4.9
AE014296-1060|AAF50703.1| 91|Drosophila melanogaster CG6610-PA... 29 4.9
BT022704-1|AAY55120.1| 530|Drosophila melanogaster IP12319p pro... 29 8.6
BT022660-1|AAY55076.1| 530|Drosophila melanogaster IP12219p pro... 29 8.6
BT022640-1|AAY55056.1| 530|Drosophila melanogaster IP12019p pro... 29 8.6
AE013599-3161|ABI31110.1| 530|Drosophila melanogaster CG15661-P... 29 8.6
AE013599-3160|AAF46698.3| 530|Drosophila melanogaster CG15661-P... 29 8.6
>AY069315-1|AAL39460.1| 119|Drosophila melanogaster LD03002p
protein.
Length = 119
Score = 182 bits (443), Expect = 4e-46
Identities = 90/101 (89%), Positives = 93/101 (92%), Gaps = 1/101 (0%)
Frame = -2
Query: 731 EEEEFSTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKEMWTEVPR 552
EEEEF+TGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKEMWTE+PR
Sbjct: 19 EEEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKEMWTELPR 78
Query: 551 T-XXXXXXKAVNKDKFISKMFLRGDSVILVLRNPLATAAGK 432
T K VNKD+FISKMFLRGDSVILVLRNPLATAAGK
Sbjct: 79 TGKGKKKVKPVNKDRFISKMFLRGDSVILVLRNPLATAAGK 119
>AE014297-442|AAF54135.1| 119|Drosophila melanogaster CG1249-PA
protein.
Length = 119
Score = 182 bits (443), Expect = 4e-46
Identities = 90/101 (89%), Positives = 93/101 (92%), Gaps = 1/101 (0%)
Frame = -2
Query: 731 EEEEFSTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKEMWTEVPR 552
EEEEF+TGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKEMWTE+PR
Sbjct: 19 EEEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKEMWTELPR 78
Query: 551 T-XXXXXXKAVNKDKFISKMFLRGDSVILVLRNPLATAAGK 432
T K VNKD+FISKMFLRGDSVILVLRNPLATAAGK
Sbjct: 79 TGKGKKKVKPVNKDRFISKMFLRGDSVILVLRNPLATAAGK 119
>BT001552-1|AAN71307.1| 103|Drosophila melanogaster RE11655p
protein.
Length = 103
Score = 50.0 bits (114), Expect = 3e-06
Identities = 29/81 (35%), Positives = 44/81 (54%)
Frame = -2
Query: 707 PLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKEMWTEVPRTXXXXXXK 528
PL ++ S+ + +V + RN ++L GR+ AFD+H NMVL + +E T V
Sbjct: 18 PLDLIRLSL--DEKVYVKMRNERELRGRLHAFDQHLNMVLGDAEETVTTVEIDEETYEEV 75
Query: 527 AVNKDKFISKMFLRGDSVILV 465
+ I +F+RGD VILV
Sbjct: 76 YKTAKRTIPMLFVRGDGVILV 96
>AE014297-3433|AAN13967.1| 103|Drosophila melanogaster CG31184-PA
protein.
Length = 103
Score = 50.0 bits (114), Expect = 3e-06
Identities = 29/81 (35%), Positives = 44/81 (54%)
Frame = -2
Query: 707 PLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKEMWTEVPRTXXXXXXK 528
PL ++ S+ + +V + RN ++L GR+ AFD+H NMVL + +E T V
Sbjct: 18 PLDLIRLSL--DEKVYVKMRNERELRGRLHAFDQHLNMVLGDAEETVTTVEIDEETYEEV 75
Query: 527 AVNKDKFISKMFLRGDSVILV 465
+ I +F+RGD VILV
Sbjct: 76 YKTAKRTIPMLFVRGDGVILV 96
>L02919-1|AAA28858.1| 199|Drosophila melanogaster ribonucleoprotein
protein.
Length = 199
Score = 30.7 bits (66), Expect = 2.1
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = -2
Query: 674 NTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKE 573
N +V I ++++ +G KAFD+H N++L + +E
Sbjct: 14 NYRVRIVLQDSRTFIGTFKAFDKHMNLILGDCEE 47
>AY061171-1|AAL28719.1| 199|Drosophila melanogaster LD14049p
protein.
Length = 199
Score = 30.7 bits (66), Expect = 2.1
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = -2
Query: 674 NTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKE 573
N +V I ++++ +G KAFD+H N++L + +E
Sbjct: 14 NYRVRIVLQDSRTFIGTFKAFDKHMNLILGDCEE 47
>AE014134-1881|AAF52947.1| 199|Drosophila melanogaster CG5352-PA
protein.
Length = 199
Score = 30.7 bits (66), Expect = 2.1
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = -2
Query: 674 NTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKE 573
N +V I ++++ +G KAFD+H N++L + +E
Sbjct: 14 NYRVRIVLQDSRTFIGTFKAFDKHMNLILGDCEE 47
>AY113521-1|AAM29526.1| 91|Drosophila melanogaster RE60135p
protein.
Length = 91
Score = 29.5 bits (63), Expect = 4.9
Identities = 12/45 (26%), Positives = 29/45 (64%)
Frame = -2
Query: 707 PLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKE 573
PL ++ + + + +++ +N+K+++G + FD NM+L++V E
Sbjct: 15 PLELVDKCIGSRIHIIM--KNDKEMVGTLLGFDDFVNMLLDDVTE 57
>AE014296-1060|AAF50703.1| 91|Drosophila melanogaster CG6610-PA
protein.
Length = 91
Score = 29.5 bits (63), Expect = 4.9
Identities = 12/45 (26%), Positives = 29/45 (64%)
Frame = -2
Query: 707 PLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKE 573
PL ++ + + + +++ +N+K+++G + FD NM+L++V E
Sbjct: 15 PLELVDKCIGSRIHIIM--KNDKEMVGTLLGFDDFVNMLLDDVTE 57
>BT022704-1|AAY55120.1| 530|Drosophila melanogaster IP12319p
protein.
Length = 530
Score = 28.7 bits (61), Expect = 8.6
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +1
Query: 421 LLHYFPA--AVARGFLSTKITESPRRNILEMNLSLFTALPFFPL 546
LL+YFP AVAR F +TE P+ +E +S+ PL
Sbjct: 222 LLNYFPKMDAVAREFFGPVLTEVPKVKHMERQISVMLLNSHAPL 265
>BT022660-1|AAY55076.1| 530|Drosophila melanogaster IP12219p
protein.
Length = 530
Score = 28.7 bits (61), Expect = 8.6
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +1
Query: 421 LLHYFPA--AVARGFLSTKITESPRRNILEMNLSLFTALPFFPL 546
LL+YFP AVAR F +TE P+ +E +S+ PL
Sbjct: 222 LLNYFPKMDAVAREFFGPVLTEVPKVKHMERQISVMLLNSHAPL 265
>BT022640-1|AAY55056.1| 530|Drosophila melanogaster IP12019p
protein.
Length = 530
Score = 28.7 bits (61), Expect = 8.6
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +1
Query: 421 LLHYFPA--AVARGFLSTKITESPRRNILEMNLSLFTALPFFPL 546
LL+YFP AVAR F +TE P+ +E +S+ PL
Sbjct: 222 LLNYFPKMDAVAREFFGPVLTEVPKVKHMERQISVMLLNSHAPL 265
>AE013599-3161|ABI31110.1| 530|Drosophila melanogaster CG15661-PB,
isoform B protein.
Length = 530
Score = 28.7 bits (61), Expect = 8.6
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +1
Query: 421 LLHYFPA--AVARGFLSTKITESPRRNILEMNLSLFTALPFFPL 546
LL+YFP AVAR F +TE P+ +E +S+ PL
Sbjct: 222 LLNYFPKMDAVAREFFGPVLTEVPKVKHMERQISVMLLNSHAPL 265
>AE013599-3160|AAF46698.3| 530|Drosophila melanogaster CG15661-PA,
isoform A protein.
Length = 530
Score = 28.7 bits (61), Expect = 8.6
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +1
Query: 421 LLHYFPA--AVARGFLSTKITESPRRNILEMNLSLFTALPFFPL 546
LL+YFP AVAR F +TE P+ +E +S+ PL
Sbjct: 222 LLNYFPKMDAVAREFFGPVLTEVPKVKHMERQISVMLLNSHAPL 265
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,204,186
Number of Sequences: 53049
Number of extensions: 592972
Number of successful extensions: 944
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 940
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3293648160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -