Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10f22r
(710 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 72 4e-13
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 60 2e-09
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 39 0.003
M32877-1|AAA28001.1| 669|Caenorhabditis elegans daf-1 protein. 29 3.3
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 29 3.3
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 29 3.3
AF067616-10|AAC19189.2| 668|Caenorhabditis elegans Abnormal dau... 29 3.3
AF067616-9|AAP82657.1| 669|Caenorhabditis elegans Abnormal daue... 29 3.3
AC024799-4|AAK72318.1| 536|Caenorhabditis elegans Hypothetical ... 29 4.3
U28991-14|AAA68388.1| 352|Caenorhabditis elegans Hypothetical p... 28 5.7
U28991-13|AAA68387.1| 281|Caenorhabditis elegans Hypothetical p... 28 5.7
Z98877-12|CAB63409.1| 528|Caenorhabditis elegans Hypothetical p... 28 7.6
Z79755-7|CAB02103.1| 466|Caenorhabditis elegans Hypothetical pr... 28 7.6
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 72.1 bits (169), Expect = 4e-13
Identities = 68/236 (28%), Positives = 95/236 (40%), Gaps = 6/236 (2%)
Frame = -1
Query: 707 RIVGGTATTIDRYPTMAAALFSSNMAQWWQGCGCSILNNRAVLTAAHCIIXXXXXXXXXX 528
R++GG+ ++ +P L S + CG S+++ VLTAAHC
Sbjct: 57 RLIGGSESSPHSWPWTVQLL--SRLGH--HRCGGSLIDPNFVLTAAHCFAKDRRPTSYSV 112
Query: 527 XXXXXXXXXXXVHEVNRHIIHPNYNHRTKDA-DIAIMRTVLRINFVRNTVQPARIAGSNY 351
H V IHP YN + D AIMR +N T +P I +
Sbjct: 113 RVGGHRSGSGSPHRVTAVSIHPWYNIGFPSSYDFAIMRIHPPVN-TSTTARP--ICLPSL 169
Query: 350 NLADNQVVWAAGWGSTRTGSGF-AEQLRHVQVWTINQAICRERYSRIDRPITANMLCSGW 174
+N++ GWGST GS A LR + V ++ C + I R +MLC+G+
Sbjct: 170 PAVENRLCVVTGWGSTIEGSSLSAPTLREIHVPLLSTLFCSSLPNYIGRIHLPSMLCAGY 229
Query: 173 LDVXXXXXXXXXXXGPLY--HNG--VVVGVCSWGFSCGSAFYPGVNVRVSRFSSWI 18
GPL +G + GV SWG C PGV V S+WI
Sbjct: 230 -SYGKIDSCQGDSGGPLMCARDGHWELTGVVSWGIGCARPGMPGVYGNVHSASTWI 284
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 59.7 bits (138), Expect = 2e-09
Identities = 59/238 (24%), Positives = 94/238 (39%), Gaps = 7/238 (2%)
Frame = -1
Query: 710 SRIVGGTATTIDRYPTMAAALFSSNMAQWWQGCGCSILNNRAVLTAAHCIIXXXXXXXXX 531
+R+VGG T +P AA N A CG SIL+ ++TAAHC
Sbjct: 25 ARVVGGFETVPGAFPWTAAL---RNKATKAHHCGASILDKTHLITAAHCFEEDERVSSYE 81
Query: 530 XXXXXXXXXXXXVHEVNRHIIHPNYNHRTKDA---DIAIMRTVLRINFVRNTVQPARIAG 360
+E ++ ++ KD DIAI+ QP +
Sbjct: 82 VVVGDWDNNQTDGNEQIFYLQRIHFYPLYKDIFSHDIAILEIPYPGIEFNEYAQPICLPS 141
Query: 359 SNYNLADNQVVWAAGWGSTRTGSGFAEQLRHVQVWTINQAICRERYSRIDRPITANMLCS 180
++ + +GWGS G +AE+L+ + IN+ C S+I ++ + C+
Sbjct: 142 KDFVYTPGRQCVVSGWGSM--GLRYAERLQAALIPIINRFDCVNS-SQIYSSMSRSAFCA 198
Query: 179 GWLD--VXXXXXXXXXXXGPLYHNG--VVVGVCSWGFSCGSAFYPGVNVRVSRFSSWI 18
G+L+ + +G V+ GV SWG C PG+ V+ + SWI
Sbjct: 199 GYLEGGIDSCQGDSGGPFACRREDGAFVLAGVISWGDGCAQKKQPGIYTMVAPYLSWI 256
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 39.1 bits (87), Expect = 0.003
Identities = 58/249 (23%), Positives = 95/249 (38%), Gaps = 18/249 (7%)
Frame = -1
Query: 707 RIVGGTATTIDRYPTMAAALFSSNMAQWWQGCGCSILNNRAVLTAAHCIIXXXXXXXXXX 528
RI+GG + ID A L S CG +++++ ++TAAHC +
Sbjct: 37 RIIGGNS--IDDGANWMAKLVSYGDNGQGILCGATVIDDFWLVTAAHCALQLQTRSFVYV 94
Query: 527 XXXXXXXXXXXVHEVNRHIIHPNYNHRTKDADIAIMRTVLRINFVRNTVQPARIAGSNYN 348
V IH YN++T D DIA++R + + + ++P + +
Sbjct: 95 REPKNNRERSF--SVKEAYIHSGYNNQTADNDIALLR--ISSDLSKLGIKPVCLVHDDSK 150
Query: 347 LA---DNQVVWAAGWGSTRTGSG-----FAEQLRHVQVWTINQAICRERY---SRIDRPI 201
L N VV G SG ++ L+ V I+ C + + S + I
Sbjct: 151 LLKQYKNGVVIGYGLTLGEDSSGEPKLINSQTLQSTSVPIISDDDCVKTWRFLSLLSVKI 210
Query: 200 TANMLCSGWLDVXXXXXXXXXXXGPLYHNG--VVVGVCSWGFS-----CGSAFYPGVNVR 42
T +C+G NG V +G+ S+G +PGV R
Sbjct: 211 TGYQICAGAYLHGTAPGDSGGPLLIHKSNGEYVQIGITSYGADGLDGVIDQGKFPGVYTR 270
Query: 41 VSRFSSWIQ 15
+S++ WIQ
Sbjct: 271 ISKYVPWIQ 279
>M32877-1|AAA28001.1| 669|Caenorhabditis elegans daf-1 protein.
Length = 669
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +3
Query: 483 DLMDNTSTISKRRSY--ANSPNTDTISYNTMCGCKDGSVIENGTATSLP 623
+++++T + SY A+ + + + T+C C+DG V+ AT +P
Sbjct: 473 EILNSTMQFTVFESYQCADVYSFSLVMWETLCRCEDGDVLPREAATVIP 521
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 29.1 bits (62), Expect = 3.3
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +3
Query: 561 NTMCGCKDGSVIENGTATSLPPLGHIARK 647
N +C C++G V ++ T + + P G+I K
Sbjct: 1340 NQLCSCENGGVCDSSTGSCVCPPGYIGTK 1368
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 29.1 bits (62), Expect = 3.3
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +3
Query: 561 NTMCGCKDGSVIENGTATSLPPLGHIARK 647
N +C C++G V ++ T + + P G+I K
Sbjct: 1340 NQLCSCENGGVCDSSTGSCVCPPGYIGTK 1368
>AF067616-10|AAC19189.2| 668|Caenorhabditis elegans Abnormal dauer
formation protein1, isoform b protein.
Length = 668
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +3
Query: 483 DLMDNTSTISKRRSY--ANSPNTDTISYNTMCGCKDGSVIENGTATSLP 623
+++++T + SY A+ + + + T+C C+DG V+ AT +P
Sbjct: 472 EILNSTMQFTVFESYQCADVYSFSLVMWETLCRCEDGDVLPREAATVIP 520
>AF067616-9|AAP82657.1| 669|Caenorhabditis elegans Abnormal dauer
formation protein1, isoform a protein.
Length = 669
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +3
Query: 483 DLMDNTSTISKRRSY--ANSPNTDTISYNTMCGCKDGSVIENGTATSLP 623
+++++T + SY A+ + + + T+C C+DG V+ AT +P
Sbjct: 473 EILNSTMQFTVFESYQCADVYSFSLVMWETLCRCEDGDVLPREAATVIP 521
>AC024799-4|AAK72318.1| 536|Caenorhabditis elegans Hypothetical
protein Y49C4A.8a protein.
Length = 536
Score = 28.7 bits (61), Expect = 4.3
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +2
Query: 485 PHGQHLHYFQKKIL 526
PHG+HL+YFQK L
Sbjct: 483 PHGRHLNYFQKTFL 496
>U28991-14|AAA68388.1| 352|Caenorhabditis elegans Hypothetical
protein F08F8.1 protein.
Length = 352
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +2
Query: 86 PTSTPRRRHRCGIEDHRNHLHTDRGRRRQASRS 184
P P RRH CG D DR R R SRS
Sbjct: 38 PEVAPHRRH-CGRRDRSRSRGFDRSRSRSRSRS 69
>U28991-13|AAA68387.1| 281|Caenorhabditis elegans Hypothetical
protein F08F8.5 protein.
Length = 281
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +2
Query: 86 PTSTPRRRHRCGIEDHRNHLHTDRGRRRQASRS 184
P P RRH CG D DR R R SRS
Sbjct: 112 PEVAPHRRH-CGRRDRSRSRGFDRSRSRSRSRS 143
>Z98877-12|CAB63409.1| 528|Caenorhabditis elegans Hypothetical
protein Y69H2.12 protein.
Length = 528
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Frame = +3
Query: 492 DNTSTISKRRSYANSPNTDTISYN--TMCG 575
+N+ T SK +YA +TDT++ N T+CG
Sbjct: 231 ENSLTSSKCNNYALEQSTDTVTMNYLTLCG 260
>Z79755-7|CAB02103.1| 466|Caenorhabditis elegans Hypothetical
protein F43G9.10 protein.
Length = 466
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = +2
Query: 101 RRRHRCGIEDHRNHL-HTDRGRRRQASR 181
RRR ED R H H D GRRRQ +
Sbjct: 81 RRRESSDEEDRRRHRRHEDYGRRRQVEK 108
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,017,207
Number of Sequences: 27780
Number of extensions: 355586
Number of successful extensions: 1052
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1049
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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