Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10f21r
(757 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_4813| Best HMM Match : EMP24_GP25L (HMM E-Value=3.9e-13) 303 7e-83
SB_53257| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 6e-14
SB_17502| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 1e-12
SB_11345| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_3989| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.020
SB_55278| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_53962| Best HMM Match : HSL_N (HMM E-Value=0.00048) 31 1.0
SB_20359| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_30461| Best HMM Match : zf-C2H2 (HMM E-Value=0.064) 29 5.4
SB_4346| Best HMM Match : E-MAP-115 (HMM E-Value=1.8) 29 5.4
SB_29776| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_12754| Best HMM Match : Vicilin_N (HMM E-Value=0.49) 28 7.1
SB_2434| Best HMM Match : Vicilin_N (HMM E-Value=0.01) 28 7.1
SB_22958| Best HMM Match : RasGAP_C (HMM E-Value=0.23) 28 9.4
SB_2495| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.2e-11) 28 9.4
>SB_4813| Best HMM Match : EMP24_GP25L (HMM E-Value=3.9e-13)
Length = 348
Score = 303 bits (745), Expect = 7e-83
Identities = 141/211 (66%), Positives = 168/211 (79%), Gaps = 2/211 (0%)
Frame = -1
Query: 757 LLVIALLADCASALYFHIAEGERKCFIEEIPDDTTVIVNYKVELYDPKSGGFMQTTPGIG 578
L I + ALYFH+ E E+KCFIEEIPD+T VI YK +LYD F+ ++PGIG
Sbjct: 138 LAFIGYMLGNVQALYFHMGETEKKCFIEEIPDETMVIGKYKTQLYDENIKDFLPSSPGIG 197
Query: 577 MHVEVRDPNDRILLSRVYSLEGMISFTSSTPGEHVICMYSNSTSW--FSGSQLRVHLDIQ 404
MHVEV+DPN +I++S+ YS EG +FTS TPGEHVIC++SNST W ++G +LR+HLDIQ
Sbjct: 198 MHVEVKDPNGKIIMSKYYSSEGRFTFTSHTPGEHVICLHSNSTRWSLWAGGRLRIHLDIQ 257
Query: 403 VGEHAVDYANVAQKEKLTELQLRIRQLLDQVHQITKEQAYQRQREERFRQTSESTNQRVL 224
VGEHA DYA +A K+KLTELQLRIRQLLDQV QI+KEQ YQR REERFR TSESTNQRVL
Sbjct: 258 VGEHANDYAQIAAKDKLTELQLRIRQLLDQVEQISKEQNYQRFREERFRMTSESTNQRVL 317
Query: 223 WWSLLQTGVLVIIGYWQMRHLKSFFEAKKLV 131
WW+L QT +L+ G+WQMRHLK FFEAKKLV
Sbjct: 318 WWALAQTVILLATGFWQMRHLKGFFEAKKLV 348
>SB_53257| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 74.9 bits (176), Expect = 6e-14
Identities = 45/166 (27%), Positives = 83/166 (50%)
Frame = -1
Query: 628 LYDPKSGGFMQTTPGIGMHVEVRDPNDRILLSRVYSLEGMISFTSSTPGEHVICMYSNST 449
+++ GGF+ + V++ P+ +++ S G +F + G + C +SN
Sbjct: 4 IFEVAEGGFLD------IDVKIIGPDQKVIYSGERETSGKYTFAAHMDGTYNYC-FSNKM 56
Query: 448 SWFSGSQLRVHLDIQVGEHAVDYANVAQKEKLTELQLRIRQLLDQVHQITKEQAYQRQRE 269
S + L+ +DI + A +KL+E+ + QL + + + EQ Y RE
Sbjct: 57 STMTPKVLKFSMDIGEAPKDTSKEDNAGHDKLSEM---VSQLSEAMTGVKHEQEYMEVRE 113
Query: 268 ERFRQTSESTNQRVLWWSLLQTGVLVIIGYWQMRHLKSFFEAKKLV 131
R +++TN RV+WWS ++ VLV + Q+ +LK FFE +++V
Sbjct: 114 RIHRSINDNTNSRVVWWSFFESLVLVAMTLGQVYYLKRFFEVRRVV 159
>SB_17502| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 385
Score = 70.5 bits (165), Expect = 1e-12
Identities = 47/160 (29%), Positives = 81/160 (50%)
Frame = -1
Query: 727 ASALYFHIAEGERKCFIEEIPDDTTVIVNYKVELYDPKSGGFMQTTPGIGMHVEVRDPND 548
AS+L F ++ G RKC EE+ D V+V + L D P +++V D
Sbjct: 78 ASSLSFTLSSGNRKCLKEEVHKD--VLVTGEFTLSD---------APQQKTNLKVTDSTG 126
Query: 547 RILLSRVYSLEGMISFTSSTPGEHVICMYSNSTSWFSGSQLRVHLDIQVGEHAVDYANVA 368
+ R + +G +FT+ + +C + + TS GS V ++I+ G A +Y ++A
Sbjct: 127 HVFYKRDDATKGKFAFTTDDYDMYEVC-FDSETSHGGGSDREVSINIKHGVEAKNYEDLA 185
Query: 367 QKEKLTELQLRIRQLLDQVHQITKEQAYQRQREERFRQTS 248
+ EKL +++ +++L D I + AY RQRE+ R T+
Sbjct: 186 KAEKLKPMEVELKRLEDLGDAIVNDFAYMRQREQEMRDTN 225
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/58 (41%), Positives = 35/58 (60%)
Frame = -1
Query: 421 VHLDIQVGEHAVDYANVAQKEKLTELQLRIRQLLDQVHQITKEQAYQRQREERFRQTS 248
V ++I+ G A Y N+AQ EKL ++L +R+L D +I AY R+REE R T+
Sbjct: 236 VSINIKHGTEAKAYQNLAQAEKLKPIKLAMRRLEDMADEIVSSFAYFREREEEQRNTN 293
Score = 33.5 bits (73), Expect = 0.19
Identities = 22/91 (24%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Frame = -1
Query: 394 HAVDYANVAQKEKLTELQLRIRQLLDQVHQITKEQAYQRQREERFR---QTSESTNQRVL 224
H + Y + + ++ + ++ L + + + A+ R+ F EST R+L
Sbjct: 296 HTIQYCTNIRNHVI-DIDVTLQLLFTKENATKGKFAFTFDRDGHFDLCFDNQESTGARIL 354
Query: 223 WWSLLQTGVLVIIGYWQMRHLKSFFEAKKLV 131
+ + T +LV++ Q+ +L FF AKKL+
Sbjct: 355 YLGVFLTMLLVMLTGGQLVYLHRFFAAKKLI 385
>SB_11345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 243
Score = 49.2 bits (112), Expect = 4e-06
Identities = 47/209 (22%), Positives = 87/209 (41%), Gaps = 13/209 (6%)
Frame = -1
Query: 724 SALYFHIAEGERKCFIEEIPDDTTVIVNYKVELYDPK-----SGGFMQTTPGIGMHVEV- 563
S F + G+R CF E I + T+ V Y+V Y K +G F G +++
Sbjct: 33 SGFTFRVDPGKRDCFYETIKRNVTLDVEYQVCAYVYKRHYCGNGMFDNNLVIEGGDLDIG 92
Query: 562 ---RDPNDRILLSRVYSLEGMISFTSSTPGEHVICMYSNSTSWFSGSQLRVHLDIQVGEH 392
+ P+ +I + + + S + GE+ C + N+ S + + L + +
Sbjct: 93 FTLQAPSGKIAIEDGHRTDEAHSLVTEEEGEYEFC-FDNTFSTVASKAIFADLGVDFEDD 151
Query: 391 AVDYANVAQKEKLTELQLRIRQLLDQVH-QITKEQAYQR---QREERFRQTSESTNQRVL 224
+ + +L R + L+ V + K + Q R + ++S + RV
Sbjct: 152 IQKMIGIKDENLEEDLHDRFVRTLENVRVDLDKAEHIQNFISSAAARDFRLAKSKDSRVF 211
Query: 223 WWSLLQTGVLVIIGYWQMRHLKSFFEAKK 137
WWSL+Q+ L+ + Q+ +K FF K
Sbjct: 212 WWSLIQSVALIGVAIVQVNVVKHFFGGGK 240
>SB_3989| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1283
Score = 36.7 bits (81), Expect = 0.020
Identities = 21/63 (33%), Positives = 35/63 (55%)
Frame = -1
Query: 421 VHLDIQVGEHAVDYANVAQKEKLTELQLRIRQLLDQVHQITKEQAYQRQREERFRQTSES 242
V +DIQ EH + + ++L E QLR+ +L Q HQ+ KE ++Q +ER + +
Sbjct: 215 VVVDIQKNEHQ---QRLLELQRLQEEQLRLTELEIQEHQLKKELILKKQEQERQKLLQQL 271
Query: 241 TNQ 233
N+
Sbjct: 272 RNE 274
>SB_55278| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 351
Score = 33.1 bits (72), Expect = 0.25
Identities = 33/121 (27%), Positives = 51/121 (42%)
Frame = -1
Query: 757 LLVIALLADCASALYFHIAEGERKCFIEEIPDDTTVIVNYKVELYDPKSGGFMQTTPGIG 578
L + +L C L F + + R+CF EE+ D + ++V +GG
Sbjct: 14 LALSCILVSCTE-LTFELEDNARQCFYEELKKDAKATLEFQV-----ITGG------NYD 61
Query: 577 MHVEVRDPNDRILLSRVYSLEGMISFTSSTPGEHVICMYSNSTSWFSGSQLRVHLDIQVG 398
+ V + D N++ L S +FT PG + C +SN S S V+ D Q G
Sbjct: 62 VDVILYDINEKELYSVQKKQYDSHTFTVEQPGIYKFC-FSNEFSTI--SHKTVYFDFQSG 118
Query: 397 E 395
E
Sbjct: 119 E 119
>SB_53962| Best HMM Match : HSL_N (HMM E-Value=0.00048)
Length = 250
Score = 31.1 bits (67), Expect = 1.0
Identities = 27/121 (22%), Positives = 50/121 (41%), Gaps = 5/121 (4%)
Frame = -1
Query: 496 SSTPGEHVICMY--SNSTSWFSGSQLRVHLDIQVGEHAVDYANVAQKEKLTELQLRIRQL 323
+S PG +C+ + S L +HL V ++A ++ A K +Q+
Sbjct: 2 ASDPGNQTVCVCPPGEREDFDSFPVLLLHLKRIVADNAEYFSKYAHKAVYKRFHESFKQI 61
Query: 322 LDQVHQITKEQAYQRQREERFRQTSE-STNQRVLWWSLLQTGVLVI--IGYWQMRHLKSF 152
LD + + + Y QR F + E N + + G+ V+ I Y+ + H + F
Sbjct: 62 LDSIGSMEELSTYLAQRVTLFDFSPEIKGNGYRSLLRITEHGIRVVTEISYYCLTHREKF 121
Query: 151 F 149
+
Sbjct: 122 Y 122
>SB_20359| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4700
Score = 29.1 bits (62), Expect = 4.1
Identities = 23/98 (23%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Frame = -1
Query: 421 VHLDIQVGEHAVDYANV---AQKEKLTELQLRIRQLLDQVHQITKEQAYQRQREERFRQT 251
+ D++ A++ AN A +EKL++++ +I++L + + ++T + + +Q
Sbjct: 3484 IFCDVEPKRKALEAANAELAAAEEKLSKIKAKIQELDENLAELTANFERATSEKLKCQQE 3543
Query: 250 SESTNQRVLWWSLLQTGVLVIIGYWQMRHLKSFFEAKK 137
+EST + + + L G+ W +KSF E +K
Sbjct: 3544 AESTAKTIELANRLVGGLASENVRWG-ESVKSFKEQEK 3580
>SB_30461| Best HMM Match : zf-C2H2 (HMM E-Value=0.064)
Length = 197
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/45 (26%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Frame = -1
Query: 376 NVAQKEKLTELQL---RIRQLLDQVHQITKEQAYQRQREERFRQT 251
++ +KE L ++Q+ +++++ Q ++ K++ +R+ EERF +T
Sbjct: 9 SLREKELLEKIQMEQEKLQRIKQQQLELEKQERLEREEEERFNKT 53
>SB_4346| Best HMM Match : E-MAP-115 (HMM E-Value=1.8)
Length = 189
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = -1
Query: 388 VDYANVAQKEKLTELQLRIRQLLDQVHQITKEQAYQRQRE-ERFRQTSESTNQR 230
V+ ++ + + +LQ R+R + +Q QITKE Y+ +E R +T ++ QR
Sbjct: 67 VEQHDLTDRSTVEQLQSRLRSVEEQNRQITKE--YEENKELLRLAETEKNILQR 118
>SB_29776| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 374
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = -1
Query: 397 EHAVDYANVAQKEK-LTELQLRIRQLLDQVHQITKEQA-YQRQREERFRQTSESTNQR 230
E + + ++E+ LTE Q +++ D+ +T+EQA +R RE T E N +
Sbjct: 181 EEQANAKRIRERERPLTEEQANAKRIRDKERTLTEEQANAKRIRERGHTSTEEQANAK 238
>SB_12754| Best HMM Match : Vicilin_N (HMM E-Value=0.49)
Length = 440
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = -1
Query: 370 AQKEKLTELQLRIRQLLDQVHQITKEQAYQRQREERFRQTSEST 239
A KEK ++ L RQ LDQ+H + +RQR E+ ++ ST
Sbjct: 261 AMKEKDVKM-LGYRQALDQLHGQLLDAREERQRAEQILESRYST 303
>SB_2434| Best HMM Match : Vicilin_N (HMM E-Value=0.01)
Length = 317
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = -1
Query: 397 EHAVDYANVAQKEKLTELQLRIRQLLDQVH--QITKEQAYQRQREERFRQTSESTNQRVL 224
+H + N+ E L + + +Q + + Q +E+A +++REE + E N+R
Sbjct: 55 QHETEINNIGLNEFLEHEKKKWKQTEQEKNSFQTQREEALRKRREEEEKILIEQHNKRTE 114
Query: 223 WWSLLQ 206
W + +Q
Sbjct: 115 WQTKMQ 120
>SB_22958| Best HMM Match : RasGAP_C (HMM E-Value=0.23)
Length = 1178
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = -1
Query: 361 EKLTELQLRIRQLLDQVHQITKE-QAYQRQREERFRQTSESTNQ 233
++ T L IR+L +VHQ+T+E +A Q R + ++ E T++
Sbjct: 307 QQTTATGLVIRELEGRVHQLTQESEALQESRTKLAKEKEELTDK 350
>SB_2495| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.2e-11)
Length = 2024
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -1
Query: 424 RVHLDIQVGEHAVDYANVAQKEKLTELQLRIRQLLDQVHQITKEQ-AYQRQREER 263
R H + G+ + AN K ++TEL L+++ + + +E +YQR+ E+
Sbjct: 313 RAHHVTRRGKDEAEKANFKLKTEVTELNLKLKSYQQENEDLNQEVISYQRKVSEK 367
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,951,235
Number of Sequences: 59808
Number of extensions: 444845
Number of successful extensions: 1218
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1213
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2058295707
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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