Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10f21r
(757 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL117207-7|CAB60397.1| 211|Caenorhabditis elegans Hypothetical ... 314 6e-86
AC199170-2|ABO33261.1| 167|Caenorhabditis elegans Hypothetical ... 192 3e-49
Z74035-1|CAA98480.1| 204|Caenorhabditis elegans Hypothetical pr... 102 3e-22
AF039713-7|AAB96722.1| 203|Caenorhabditis elegans Hypothetical ... 79 4e-15
AF014940-5|AAB63937.1| 203|Caenorhabditis elegans Suppressor/en... 69 4e-12
Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr... 33 0.22
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch... 33 0.22
M37235-1|AAA28122.1| 273|Caenorhabditis elegans myosin II protein. 33 0.22
AL132904-19|CAD91707.1| 371|Caenorhabditis elegans Hypothetical... 29 4.7
Z34802-3|CAA84333.1| 354|Caenorhabditis elegans Hypothetical pr... 28 6.2
U41542-2|AAR30212.1| 623|Caenorhabditis elegans Suppressor of p... 28 8.2
U41542-1|AAR30211.1| 684|Caenorhabditis elegans Suppressor of p... 28 8.2
>AL117207-7|CAB60397.1| 211|Caenorhabditis elegans Hypothetical
protein Y60A3A.9 protein.
Length = 211
Score = 314 bits (770), Expect = 6e-86
Identities = 145/209 (69%), Positives = 172/209 (82%)
Frame = -1
Query: 757 LLVIALLADCASALYFHIAEGERKCFIEEIPDDTTVIVNYKVELYDPKSGGFMQTTPGIG 578
L+ + LA A +LYFHIAE E+KCFIEEIPD+T V NYKV+LYDP + G+ P IG
Sbjct: 4 LIALLSLATYADSLYFHIAETEKKCFIEEIPDETMVTGNYKVQLYDPNTKGYGDY-PNIG 62
Query: 577 MHVEVRDPNDRILLSRVYSLEGMISFTSSTPGEHVICMYSNSTSWFSGSQLRVHLDIQVG 398
MHVEV+DP D+++LS++Y+ EG +FTS+TPGEHVIC+YSNST+WF+G+QLRVHLDIQ G
Sbjct: 63 MHVEVKDPEDKVILSKLYTAEGRFTFTSNTPGEHVICIYSNSTAWFNGAQLRVHLDIQAG 122
Query: 397 EHAVDYANVAQKEKLTELQLRIRQLLDQVHQITKEQAYQRQREERFRQTSESTNQRVLWW 218
+HA DYA +AQK+KL ELQLRIRQLLDQV QITKEQ YQR REERFRQTSESTN RV +W
Sbjct: 123 DHAQDYAQIAQKDKLNELQLRIRQLLDQVDQITKEQNYQRYREERFRQTSESTNSRVFYW 182
Query: 217 SLLQTGVLVIIGYWQMRHLKSFFEAKKLV 131
S+ Q VL I G WQMRHL+ FFEAKKLV
Sbjct: 183 SIAQVVVLAITGAWQMRHLRGFFEAKKLV 211
>AC199170-2|ABO33261.1| 167|Caenorhabditis elegans Hypothetical
protein T08D2.1 protein.
Length = 167
Score = 192 bits (467), Expect = 3e-49
Identities = 85/137 (62%), Positives = 110/137 (80%)
Frame = -1
Query: 757 LLVIALLADCASALYFHIAEGERKCFIEEIPDDTTVIVNYKVELYDPKSGGFMQTTPGIG 578
L+ + LA A +LYFHIAE E+KCFIEEIPD+T V NYKV+LYDP + G+ P IG
Sbjct: 4 LIALLSLATYADSLYFHIAETEKKCFIEEIPDETMVTGNYKVQLYDPNTKGYGDY-PNIG 62
Query: 577 MHVEVRDPNDRILLSRVYSLEGMISFTSSTPGEHVICMYSNSTSWFSGSQLRVHLDIQVG 398
MHVEV+DP D+++LS++Y+ EG +FTS+TPGEHVIC+YSN+T+WF+G+QLRVHLDIQ G
Sbjct: 63 MHVEVKDPEDKVILSKLYTSEGRFTFTSNTPGEHVICIYSNTTAWFNGAQLRVHLDIQAG 122
Query: 397 EHAVDYANVAQKEKLTE 347
+HA DYA V ++ KL E
Sbjct: 123 DHAQDYAQVEEERKLDE 139
>Z74035-1|CAA98480.1| 204|Caenorhabditis elegans Hypothetical
protein F47G9.1 protein.
Length = 204
Score = 102 bits (244), Expect = 3e-22
Identities = 70/211 (33%), Positives = 109/211 (51%), Gaps = 3/211 (1%)
Frame = -1
Query: 754 LVIALLADC-ASALYFHIAEGERKCFIEEIPDDTTVIVNYKVELYDPKSGGFMQTTPGIG 578
LVI L A A +L F++ E+KC EEI + V Y+ S G T
Sbjct: 4 LVIFLSAIVLAHSLRFYVPPKEKKCLKEEIHKNVVVTGEYEF------SQGIQYTGS--- 54
Query: 577 MHVEVRDPNDRILLSR--VYSLEGMISFTSSTPGEHVICMYSNSTSWFSGSQLRVHLDIQ 404
+ V D L R L+G +FT+ IC+ ++ + G + V L ++
Sbjct: 55 --IHVTDTRGHTLYKRENFADLKGKFAFTADEYDIFEICIENHPPAGHPGEKREVSLILK 112
Query: 403 VGEHAVDYANVAQKEKLTELQLRIRQLLDQVHQITKEQAYQRQREERFRQTSESTNQRVL 224
G A +Y ++A+ EKL L++ +R+L D ITK+ A+ RQREE R T+ESTN RVL
Sbjct: 113 HGVEAKNYDDIAKAEKLKPLEVELRRLEDMADSITKDFAFMRQREEEMRNTNESTNSRVL 172
Query: 223 WWSLLQTGVLVIIGYWQMRHLKSFFEAKKLV 131
+ S+ L+ + WQ+ L+++F++KKL+
Sbjct: 173 YLSIFSMLCLLGLAIWQVLFLRNYFKSKKLI 203
>AF039713-7|AAB96722.1| 203|Caenorhabditis elegans Hypothetical
protein F57B10.5 protein.
Length = 203
Score = 78.6 bits (185), Expect = 4e-15
Identities = 57/195 (29%), Positives = 94/195 (48%), Gaps = 1/195 (0%)
Frame = -1
Query: 718 LYFHIAEGERKCFIEEIPDDTTVIVNYKVELYDPKSGGFMQTTPGIGMHVEVRDPNDRIL 539
L F + + +CF E++ D + ++V +GG + + + DPN ++L
Sbjct: 20 LTFELPDNANQCFYEDLKKDVDTVFEFQVV-----TGGHYD------VDLIIEDPNGKVL 68
Query: 538 LSRVYSLEGMISFTSSTPGEHVICMYSNSTSWFSGSQLRVHLDIQVGEHAVDYANVAQ-K 362
I+F + G + C +SN S FS V++D Q G+ +A V Q
Sbjct: 69 YKDTKKQYDSINFKAEVEGTYKAC-FSNEFSTFSHKI--VYMDWQFGDQNALHAAVTQGA 125
Query: 361 EKLTELQLRIRQLLDQVHQITKEQAYQRQREERFRQTSESTNQRVLWWSLLQTGVLVIIG 182
+T+L+ + D++ I Q + R RE R+ +E N+RV+ WSL Q+ V+V IG
Sbjct: 126 HAMTQLENYAVAIGDKLRTIDDYQTHHRLREATGRKRAEELNERVMIWSLGQSAVVVFIG 185
Query: 181 YWQMRHLKSFFEAKK 137
Q+ LKSFF K+
Sbjct: 186 IGQVFLLKSFFNDKR 200
>AF014940-5|AAB63937.1| 203|Caenorhabditis elegans
Suppressor/enhancer of lin-12 protein9 protein.
Length = 203
Score = 68.9 bits (161), Expect = 4e-12
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 5/212 (2%)
Frame = -1
Query: 751 VIALLADCASALYF-HIAEGERKCFIEEIPDDTTVIVNYKVELYDPKSGGFMQTTPGIGM 575
++A+L +A YF H+ E +CF + + T + + ++V GGF+ +
Sbjct: 7 ILAVLFVTPAASYFIHVDANEEQCFFDRLTSGTKMGLMFEVA-----EGGFLD------I 55
Query: 574 HVEVRDPNDRILLSRVYSLEGMISFTSSTPGEHVICMYSNSTSWFSGSQLRVHLDI---- 407
V++ P+++ + G +F + G + C + N S + + ++I
Sbjct: 56 DVKITGPDNKEIYKGERESSGKFTFAAHMDGVYTYC-FGNKMSTMTPKAVMFTVEITEPH 114
Query: 406 QVGEHAVDYANVAQKEKLTELQLRIRQLLDQVHQITKEQAYQRQREERFRQTSESTNQRV 227
Q A + A KL E+ +R+L + + EQ Y RE R +E+TN RV
Sbjct: 115 QQAPGAAANQDAADNAKLEEM---VRELSSALMSVKHEQEYMEVRERVHRNINENTNSRV 171
Query: 226 LWWSLLQTGVLVIIGYWQMRHLKSFFEAKKLV 131
+ W+ + VLV + Q+ +LK FFE + +V
Sbjct: 172 VMWAAFEAFVLVGMTVGQIFYLKRFFEVRTMV 203
>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 33.1 bits (72), Expect = 0.22
Identities = 18/57 (31%), Positives = 33/57 (57%)
Frame = -1
Query: 424 RVHLDIQVGEHAVDYANVAQKEKLTELQLRIRQLLDQVHQITKEQAYQRQREERFRQ 254
++ DI E A+D+AN A ++ Q IR+ LDQ+ ++ + +++R E FR+
Sbjct: 1633 KLEADINELEIALDHANKANEDA----QKNIRRYLDQIRELQQTVDEEQKRREEFRE 1685
>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 33.1 bits (72), Expect = 0.22
Identities = 18/57 (31%), Positives = 33/57 (57%)
Frame = -1
Query: 424 RVHLDIQVGEHAVDYANVAQKEKLTELQLRIRQLLDQVHQITKEQAYQRQREERFRQ 254
++ DI E A+D+AN A ++ Q IR+ LDQ+ ++ + +++R E FR+
Sbjct: 1633 KLEADINELEIALDHANKANEDA----QKNIRRYLDQIRELQQTVDEEQKRREEFRE 1685
>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain 2
protein.
Length = 1947
Score = 33.1 bits (72), Expect = 0.22
Identities = 18/57 (31%), Positives = 33/57 (57%)
Frame = -1
Query: 424 RVHLDIQVGEHAVDYANVAQKEKLTELQLRIRQLLDQVHQITKEQAYQRQREERFRQ 254
++ DI E A+D+AN A ++ Q IR+ LDQ+ ++ + +++R E FR+
Sbjct: 1633 KLEADINELEIALDHANKANEDA----QKNIRRYLDQIRELQQTVDEEQKRREEFRE 1685
>M37235-1|AAA28122.1| 273|Caenorhabditis elegans myosin II protein.
Length = 273
Score = 33.1 bits (72), Expect = 0.22
Identities = 18/57 (31%), Positives = 33/57 (57%)
Frame = -1
Query: 424 RVHLDIQVGEHAVDYANVAQKEKLTELQLRIRQLLDQVHQITKEQAYQRQREERFRQ 254
++ DI E A+D+AN A ++ Q IR+ LDQ+ ++ + +++R E FR+
Sbjct: 133 KLEADINELEIALDHANKANEDA----QKNIRRYLDQIRELQQTVDEEQKRREEFRE 185
>AL132904-19|CAD91707.1| 371|Caenorhabditis elegans Hypothetical
protein Y111B2A.26 protein.
Length = 371
Score = 28.7 bits (61), Expect = 4.7
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Frame = -1
Query: 430 QLRVHLDIQVGEHAVDYANVAQKEKLTELQLRIRQLLDQVHQITK-----EQAYQRQREE 266
+LR HL I V E + A V +++ TEL+ R+R+L + HQ+ + Q YQ Q
Sbjct: 42 RLREHLMI-VEETSTREA-VEAEQRETELRARVRELETKGHQVEEGASESTQQYQVQIAS 99
Query: 265 RFRQTSESTNQRVLWWSLLQTGV 197
Q N+ W +T V
Sbjct: 100 LTSQVESLQNKTTEWKKKFETEV 122
>Z34802-3|CAA84333.1| 354|Caenorhabditis elegans Hypothetical
protein M88.3 protein.
Length = 354
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +3
Query: 516 SNE*TRDNSILSFGSRTSTCMPMPGVVCMNPP 611
SNE +NS+LS S S+ +P+PG++ + PP
Sbjct: 6 SNE--TNNSLLSSASSFSSFLPVPGILELIPP 35
>U41542-2|AAR30212.1| 623|Caenorhabditis elegans Suppressor of
presenilin defectprotein 3, isoform b protein.
Length = 623
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -3
Query: 623 RSEIWRIHANNTGHRHAR*SPRSE**NTVVSSLFVGRNDL 504
R+ +WR N GH H + P+ E N SS F + +L
Sbjct: 193 RTRLWRYMEENFGHEHLK-QPKLESDNPSTSSSFESQTNL 231
>U41542-1|AAR30211.1| 684|Caenorhabditis elegans Suppressor of
presenilin defectprotein 3, isoform a protein.
Length = 684
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -3
Query: 623 RSEIWRIHANNTGHRHAR*SPRSE**NTVVSSLFVGRNDL 504
R+ +WR N GH H + P+ E N SS F + +L
Sbjct: 193 RTRLWRYMEENFGHEHLK-QPKLESDNPSTSSSFESQTNL 231
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,428,186
Number of Sequences: 27780
Number of extensions: 331243
Number of successful extensions: 1049
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1017
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1046
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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