BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV10f21r (757 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g09580.1 68414.m01075 emp24/gp25L/p24 family protein similar ... 102 2e-22 At1g69460.1 68414.m07981 emp24/gp25L/p24 family protein similar ... 101 7e-22 At1g57620.1 68414.m06539 emp24/gp25L/p24 family protein similar ... 96 2e-20 At1g21900.1 68414.m02741 emp24/gp25L/p24 family protein similar ... 94 8e-20 At1g14010.1 68414.m01654 emp24/gp25L/p24 family protein similar ... 88 7e-18 At1g26690.1 68414.m03251 emp24/gp25L/p24 family protein similar ... 86 2e-17 At2g03290.1 68415.m00284 emp24/gp25L/p24 family protein similar ... 83 2e-16 At3g29070.1 68416.m03636 emp24/gp25L/p24 family protein similar ... 77 2e-14 At2g03040.1 68415.m00257 transmembrane protein-related low simil... 58 8e-09 At1g74630.1 68414.m08643 pentatricopeptide (PPR) repeat-containi... 36 0.029 At4g20770.1 68417.m03016 pentatricopeptide (PPR) repeat-containi... 29 2.5 At1g07900.1 68414.m00859 LOB domain protein 1 / lateral organ bo... 29 2.5 At2g25790.1 68415.m03095 leucine-rich repeat transmembrane prote... 29 3.3 At1g11720.1 68414.m01345 starch synthase, putative strong simila... 29 4.4 At3g28030.1 68416.m03499 UV hypersensitive protein (UVH3) / DNA-... 28 5.8 At5g43900.1 68418.m05368 myosin heavy chain (MYA2) nearly identi... 28 7.7 >At1g09580.1 68414.m01075 emp24/gp25L/p24 family protein similar to SP|P49755 Transmembrane protein Tmp21 precursor (21 kDa Transmembrane trafficking protein) {Homo sapiens}; contains Pfam profile PF01105: emp24/gp25L/p24 family Length = 217 Score = 102 bits (245), Expect = 2e-22 Identities = 60/209 (28%), Positives = 105/209 (50%) Frame = -1 Query: 757 LLVIALLADCASALYFHIAEGERKCFIEEIPDDTTVIVNYKVELYDPKSGGFMQTTPGIG 578 L ++ ++ A++ + KC EEI + V+ +Y + D + P I Sbjct: 18 LFLVPVMIPVGEAVWLDVPPTGTKCVSEEIQSNVVVLADYLIISEDH------EVMPTIS 71 Query: 577 MHVEVRDPNDRILLSRVYSLEGMISFTSSTPGEHVICMYSNSTSWFSGSQLRVHLDIQVG 398 V+V P L + G +FT+ G ++ C +++ S + +++D + G Sbjct: 72 --VKVTSPYGNNLHNMENVTHGQFAFTTQESGNYLACFWADEKS-HGNKNVSINIDWRTG 128 Query: 397 EHAVDYANVAQKEKLTELQLRIRQLLDQVHQITKEQAYQRQREERFRQTSESTNQRVLWW 218 A D+A++A+KEK+ ++L IR+L V I + Y R RE R SE TN RV W+ Sbjct: 129 IAAKDWASIAKKEKIEGVELEIRKLEGAVEAIHENILYLRNREADMRTMSEKTNSRVAWY 188 Query: 217 SLLQTGVLVIIGYWQMRHLKSFFEAKKLV 131 S++ GV + + +Q+ +LK +FE KKL+ Sbjct: 189 SIMSLGVCIAVSGFQVLYLKQYFEKKKLI 217 >At1g69460.1 68414.m07981 emp24/gp25L/p24 family protein similar to SP|Q28735 Transmembrane protein Tmp21 precursor (21 kDa Transmembrane trafficking protein) {Oryctolagus cuniculus}; contains Pfam profile: PF01105: emp24/gp25L/p24 family Length = 214 Score = 101 bits (241), Expect = 7e-22 Identities = 57/209 (27%), Positives = 107/209 (51%) Frame = -1 Query: 757 LLVIALLADCASALYFHIAEGERKCFIEEIPDDTTVIVNYKVELYDPKSGGFMQTTPGIG 578 LL++A+ + + +L+F + G KC E+I ++ + Y ++ +P G + T I Sbjct: 12 LLILAIWSPISHSLHFDLHSGRTKCIAEDIKSNSMTVGKYNID--NPHEGQALPQTHKIS 69 Query: 577 MHVEVRDPNDRILLSRVYSLEGMISFTSSTPGEHVICMYSNSTSWFSGSQLRVHLDIQVG 398 + V N+ +V S G +F++ G+++ C + L + + + G Sbjct: 70 VKVTSNSGNNYHHAEQVDS--GQFAFSAVEAGDYMACF--TAVDHKPEVSLSIDFEWKTG 125 Query: 397 EHAVDYANVAQKEKLTELQLRIRQLLDQVHQITKEQAYQRQREERFRQTSESTNQRVLWW 218 + +ANVA+K ++ ++ ++ LLD V+ I +E Y R REE + + STN ++ W Sbjct: 126 VQSKSWANVAKKSQVEVMEFEVKSLLDTVNSIHEEMYYLRDREEEMQDLNRSTNTKMAWL 185 Query: 217 SLLQTGVLVIIGYWQMRHLKSFFEAKKLV 131 S+L V + + Q HLK+FFE KK++ Sbjct: 186 SVLSFFVCIGVAGMQFLHLKTFFEKKKVI 214 >At1g57620.1 68414.m06539 emp24/gp25L/p24 family protein similar to SP|P49755 Transmembrane protein Tmp21 precursor (21 kDa Transmembrane trafficking protein) {Homo sapiens}; contains Pfam profile PF01105: emp24/gp25L/p24 family Length = 212 Score = 96.3 bits (229), Expect = 2e-20 Identities = 58/207 (28%), Positives = 104/207 (50%) Frame = -1 Query: 751 VIALLADCASALYFHIAEGERKCFIEEIPDDTTVIVNYKVELYDPKSGGFMQTTPGIGMH 572 +I L+ A++ + KC EEI + V+ +Y V + + S P + Sbjct: 15 LIFSLSPICEAVWLTVPHTGSKCVSEEIQSNVIVLADYLV-ISEEHS-----IFPTVS-- 66 Query: 571 VEVRDPNDRILLSRVYSLEGMISFTSSTPGEHVICMYSNSTSWFSGSQLRVHLDIQVGEH 392 V+V P +L R + G +FT+ G ++ C +++ S +++D + G Sbjct: 67 VKVTAPYGTVLHHRENTTNGQFAFTTQESGTYLACFEADAKS-HGNKDFSINIDWKTGIA 125 Query: 391 AVDYANVAQKEKLTELQLRIRQLLDQVHQITKEQAYQRQREERFRQTSESTNQRVLWWSL 212 A D+ ++A+KEK+ ++L ++L V I + Y R RE R SE TN RV W+S+ Sbjct: 126 AKDWDSIARKEKIEGVELEFKKLEGAVEAIHENLIYLRNREAEMRIVSEKTNSRVAWYSI 185 Query: 211 LQTGVLVIIGYWQMRHLKSFFEAKKLV 131 + G+ +++ Q+ +LK +FE KKL+ Sbjct: 186 MSLGICIVVSGLQILYLKQYFEKKKLI 212 >At1g21900.1 68414.m02741 emp24/gp25L/p24 family protein similar to SP|O35587 Transmembrane protein Tmp21 precursor (21 kDa Transmembrane trafficking protein) {Mesocricetus auratus}; contains Pfam profile PF01105: emp24/gp25L/p24 family Length = 216 Score = 94.3 bits (224), Expect = 8e-20 Identities = 60/211 (28%), Positives = 113/211 (53%), Gaps = 2/211 (0%) Frame = -1 Query: 757 LLVIALLADCASALYFHI-AEGERKCFIEEIPDDTTVIVNYKV-ELYDPKSGGFMQTTPG 584 +++ L + A++ I G KC EEI + V+ +Y V + ++P++ TP Sbjct: 15 VVLFFLTVNYGEAIWLTIPTTGGTKCVSEEIQSNVVVLADYYVVDEHNPEN------TPA 68 Query: 583 IGMHVEVRDPNDRILLSRVYSLEGMISFTSSTPGEHVICMYSNSTSWFSGSQLRVHLDIQ 404 + +V P L + G +FT+ G ++ C + +S+ + + + + +D + Sbjct: 69 VSS--KVTSPYGNNLHHQENVTHGQFAFTTQEAGNYLACFWIDSSHHLA-NPITLGVDWK 125 Query: 403 VGEHAVDYANVAQKEKLTELQLRIRQLLDQVHQITKEQAYQRQREERFRQTSESTNQRVL 224 +G A D+ +VA+KEK+ ++L++R+L V I + Y + RE R+ SE+TN RV Sbjct: 126 MGIAAKDWDSVAKKEKIEGVELQLRRLEGLVLSIRENLNYIKDREAEMREVSETTNSRVA 185 Query: 223 WWSLLQTGVLVIIGYWQMRHLKSFFEAKKLV 131 W+S++ GV V++ Q+ +LK +F KKL+ Sbjct: 186 WFSIMSLGVCVVVVGSQILYLKRYFHKKKLI 216 >At1g14010.1 68414.m01654 emp24/gp25L/p24 family protein similar to SP|P49755 Transmembrane protein Tmp21 precursor (21 kDa Transmembrane trafficking protein) {Homo sapiens}; contains Pfam profile PF01105: emp24/gp25L/p24 family Length = 212 Score = 87.8 bits (208), Expect = 7e-18 Identities = 52/209 (24%), Positives = 99/209 (47%) Frame = -1 Query: 757 LLVIALLADCASALYFHIAEGERKCFIEEIPDDTTVIVNYKVELYDPKSGGFMQTTPGIG 578 LL++++L+ ++ + + G KC EEI + I Y + +P + ++ + Sbjct: 10 LLILSILSPVTLSIRYELLSGHTKCISEEIHANAMTIGKYSI--INPHEDHPLPSSHKVT 67 Query: 577 MHVEVRDPNDRILLSRVYSLEGMISFTSSTPGEHVICMYSNSTSWFSGSQLRVHLDIQVG 398 V V P G SF + G+++ C ++ + L + D + G Sbjct: 68 --VRVTSPQGTAYHESDGVESGQFSFVAVETGDYISCF--SAVDHKPETTLIIDFDWRTG 123 Query: 397 EHAVDYANVAQKEKLTELQLRIRQLLDQVHQITKEQAYQRQREERFRQTSESTNQRVLWW 218 H D++NVA+K ++ ++ +++L + V+ I E Y R REE + +TN ++ W Sbjct: 124 IHTKDWSNVAKKSQVETMEFEVKKLFETVNGIHDEMFYLRDREEEMHNLNIATNSKMAWL 183 Query: 217 SLLQTGVLVIIGYWQMRHLKSFFEAKKLV 131 S + V + + Q HLK+FF+ KKL+ Sbjct: 184 SFVSLAVCLSVAGLQFWHLKTFFQKKKLI 212 >At1g26690.1 68414.m03251 emp24/gp25L/p24 family protein similar to SP|P49755 Transmembrane protein Tmp21 precursor (21 kDa Transmembrane trafficking protein) {Homo sapiens}; contains Pfam profile PF01105: emp24/gp25L/p24 family Length = 214 Score = 86.2 bits (204), Expect = 2e-17 Identities = 53/209 (25%), Positives = 102/209 (48%) Frame = -1 Query: 757 LLVIALLADCASALYFHIAEGERKCFIEEIPDDTTVIVNYKVELYDPKSGGFMQTTPGIG 578 LL +A+ + + +L+F + G KC E+I ++ + Y V +P + I Sbjct: 12 LLFLAISSQVSQSLHFELQSGRTKCISEDIKSNSMTVGKYTV--VNPNEAHPSPQSHKIS 69 Query: 577 MHVEVRDPNDRILLSRVYSLEGMISFTSSTPGEHVICMYSNSTSWFSGSQLRVHLDIQVG 398 + V N V S G +FT+ G+++ C + L + D + G Sbjct: 70 IRVTSSYGNTYHHAEDVES--GQFAFTAVESGDYMACY--TAVDHKPEVTLSIDFDWRTG 125 Query: 397 EHAVDYANVAQKEKLTELQLRIRQLLDQVHQITKEQAYQRQREERFRQTSESTNQRVLWW 218 + +++VA+K ++ ++ +++L++ V+ I +E Y R+REE + + +TN ++ W Sbjct: 126 VQSKSWSSVAKKSQVEVMEFDVKRLIETVNSIHEEMFYLREREEEMQNLNRATNSKMAWL 185 Query: 217 SLLQTGVLVIIGYWQMRHLKSFFEAKKLV 131 S L V + + Q HLK+FFE KK++ Sbjct: 186 SFLSLFVCLGVAGMQFVHLKTFFEKKKVI 214 >At2g03290.1 68415.m00284 emp24/gp25L/p24 family protein similar to SP|P49755 Transmembrane protein Tmp21 precursor (21 kDa Transmembrane trafficking protein) {Homo sapiens}; contains Pfam profile PF01105: emp24/gp25L/p24 family Length = 170 Score = 83.0 bits (196), Expect = 2e-16 Identities = 45/147 (30%), Positives = 78/147 (53%) Frame = -1 Query: 571 VEVRDPNDRILLSRVYSLEGMISFTSSTPGEHVICMYSNSTSWFSGSQLRVHLDIQVGEH 392 V+V P + L G SFT+ G +V C+ + + + L + D + G H Sbjct: 26 VKVMPPQGKNLHEADKVEAGQFSFTAYENGSYVACI--TAIDYKPETTLTIDFDWKTGVH 83 Query: 391 AVDYANVAQKEKLTELQLRIRQLLDQVHQITKEQAYQRQREERFRQTSESTNQRVLWWSL 212 + ++ NVA+K ++ ++ +++ L+D V I +E Y R+REE ++ + STN ++ W S Sbjct: 84 SKEWTNVAKKSQVDMMEYQVKTLMDTVISIHEEMYYLREREEEMQELNRSTNSKMAWLSF 143 Query: 211 LQTGVLVIIGYWQMRHLKSFFEAKKLV 131 V + + Q HLK+FFE KKL+ Sbjct: 144 GSLVVCLSVAGLQFWHLKTFFEKKKLI 170 >At3g29070.1 68416.m03636 emp24/gp25L/p24 family protein similar to SP|Q28735 Transmembrane protein Tmp21 precursor (21 kDa Transmembrane trafficking protein) {Oryctolagus cuniculus}; contains Pfam profile: PF01105 emp24/gp25L/p24 family Length = 204 Score = 76.6 bits (180), Expect = 2e-14 Identities = 50/189 (26%), Positives = 89/189 (47%) Frame = -1 Query: 697 GERKCFIEEIPDDTTVIVNYKVELYDPKSGGFMQTTPGIGMHVEVRDPNDRILLSRVYSL 518 G KC ++I + + Y + +P G + P + V V P + Sbjct: 22 GNTKCISDDIKTNYMTVGTYSI--VNPNEGHHLP--PSHKLFVTVSSPKGKSHHHAENVE 77 Query: 517 EGMISFTSSTPGEHVICMYSNSTSWFSGSQLRVHLDIQVGEHAVDYANVAQKEKLTELQL 338 G FT+ G+++ C + + ++ V + + G A D+ +A++ ++T L++ Sbjct: 78 SGKFVFTAEETGDYMTCFVA--PGYRPTAKFAVDFEWKSGVEAKDWTTIAKRGQITMLEV 135 Query: 337 RIRQLLDQVHQITKEQAYQRQREERFRQTSESTNQRVLWWSLLQTGVLVIIGYWQMRHLK 158 +R+LLD I +E +RE ++ + STN R+ SLL V + + Q+RHLK Sbjct: 136 EVRKLLDVTETIHEEMFQLIEREREMQELNRSTNSRMAALSLLSFVVTMSVAGLQLRHLK 195 Query: 157 SFFEAKKLV 131 SF E KKL+ Sbjct: 196 SFLERKKLL 204 >At2g03040.1 68415.m00257 transmembrane protein-related low similarity to SP|Q28735|TM21_RABIT Transmembrane protein Tmp21 precursor (21 kDa Transmembrane trafficking protein) (Integral membrane protein p23) {Oryctolagus cuniculus} Length = 166 Score = 57.6 bits (133), Expect = 8e-09 Identities = 41/162 (25%), Positives = 77/162 (47%) Frame = -1 Query: 757 LLVIALLADCASALYFHIAEGERKCFIEEIPDDTTVIVNYKVELYDPKSGGFMQTTPGIG 578 LL+IALL+ ++ + + + KC EEI ++ I Y + +P Sbjct: 10 LLIIALLSPRTLSMRYELKSSKTKCIGEEIHENAMSIGKYFI--VNPNEDHH-PLPDSHK 66 Query: 577 MHVEVRDPNDRILLSRVYSLEGMISFTSSTPGEHVICMYSNSTSWFSGSQLRVHLDIQVG 398 + V+V P + L G SFT+ G +V C+ + + + L + D + G Sbjct: 67 IIVKVMPPQGKNLHEADNVEAGQFSFTAYENGSYVACI--TAIDYKPETTLTIDFDWKTG 124 Query: 397 EHAVDYANVAQKEKLTELQLRIRQLLDQVHQITKEQAYQRQR 272 H+ ++ NVA+K ++ ++ +++ L+D V I +E Y R+R Sbjct: 125 VHSKEWTNVAKKSQVDMMEYQVKTLMDTVISIHEEMYYLRER 166 >At1g74630.1 68414.m08643 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat Length = 643 Score = 35.9 bits (79), Expect = 0.029 Identities = 36/160 (22%), Positives = 66/160 (41%), Gaps = 3/160 (1%) Frame = -1 Query: 682 FIEEIPDDTTVIVNYKVELYDPKSGGFMQTTPGIGMHVEVRDPN---DRILLSRVYSLEG 512 FI ++P T IV ++ L S G ++ + + DPN D +LLS Y+ G Sbjct: 429 FICQMPIPPTAIV-WRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAG 487 Query: 511 MISFTSSTPGEHVICMYSNSTSWFSGSQLRVHLDIQVGEHAVDYANVAQKEKLTELQLRI 332 +S ++ +T+W + GE ++ EKL E+ LR+ Sbjct: 488 KWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKG-IDIEAHEKLKEIILRL 546 Query: 331 RQLLDQVHQITKEQAYQRQREERFRQTSESTNQRVLWWSL 212 + ++ Y + EE+ Q S+ + + L ++L Sbjct: 547 KDEAGYTPEVA-SALYDVEEEEKEDQVSKHSEKLALAFAL 585 >At4g20770.1 68417.m03016 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat Length = 740 Score = 29.5 bits (63), Expect = 2.5 Identities = 21/67 (31%), Positives = 28/67 (41%) Frame = +1 Query: 448 KCY*STCILHVHQECWM*MRSFLPTNRLETTVFYHSDRGLQRACLCPVLFA*IRQISDRI 627 +C CI + CW M S N L+T R Q A LCP + + Sbjct: 437 ECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETS-FATVLSSC 495 Query: 628 TRLCNLL 648 +RLC+LL Sbjct: 496 SRLCSLL 502 >At1g07900.1 68414.m00859 LOB domain protein 1 / lateral organ boundaries domain protein 1 (LBD1) identical to SP|Q9LQR0 LOB domain protein 1 {Arabidopsis thaliana} Length = 190 Score = 29.5 bits (63), Expect = 2.5 Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 6/78 (7%) Frame = -1 Query: 418 HLDIQVGEHAVDYANVAQKEKLTELQLRIRQLLDQVHQITKEQAYQRQR------EERFR 257 HL QV E A AQ E + +Q + LL+ ++ + ++Q ++ + F Sbjct: 114 HLQRQVSELQAQLAK-AQVE-MVNMQFQRSNLLELIYNMDQQQKQEQDNMSFESNDLGFL 171 Query: 256 QTSESTNQRVLWWSLLQT 203 + +TN +LWW L T Sbjct: 172 EDKSNTNSSMLWWDPLWT 189 >At2g25790.1 68415.m03095 leucine-rich repeat transmembrane protein kinase, putative Length = 960 Score = 29.1 bits (62), Expect = 3.3 Identities = 14/50 (28%), Positives = 26/50 (52%) Frame = +3 Query: 456 LEYMHITCSPGVLDVNEIIPSNE*TRDNSILSFGSRTSTCMPMPGVVCMN 605 L ++H CSP V+ N + P +N ++ C+ +PG++CM+ Sbjct: 789 LRFLHCRCSPAVVAGN-LSP------ENIVIDVTDEPRLCLGLPGLLCMD 831 >At1g11720.1 68414.m01345 starch synthase, putative strong similarity to soluble-starch-synthase [Solanum tuberosum] GI:1911166 Length = 1025 Score = 28.7 bits (61), Expect = 4.4 Identities = 23/104 (22%), Positives = 50/104 (48%), Gaps = 4/104 (3%) Frame = -1 Query: 415 LDIQVGEHAVDYANVAQKEKLTELQLRIRQLLDQVHQITKEQAYQRQR----EERFRQTS 248 ++I+ G VD+ N +EKL E + ++ ++ Q +++ + Q+ +R + + Sbjct: 218 VEIKGGMDKVDFENFLLEEKLREQEKLAKEEAERERQKEEKRRIEAQKAAIEADRAQAKA 277 Query: 247 ESTNQRVLWWSLLQTGVLVIIGYWQMRHLKSFFEAKKLV*MNYN 116 E+ +R L ++ V+ W + S F+A+ V + YN Sbjct: 278 ETQKRRELLQPAIKKAVVSAENVWYIE--PSDFKAEDTVKLYYN 319 >At3g28030.1 68416.m03499 UV hypersensitive protein (UVH3) / DNA-repair protein, putative identical to UV hypersensitive protein [Arabidopsis thaliana] gi|13649704|gb|AAK37472; similar to Swiss-Prot:P14629 DNA-repair protein complementing XP-G cells homolog (Xeroderma pigmentosum group G complementing protein homolog) [Xenopus laevis] Length = 1479 Score = 28.3 bits (60), Expect = 5.8 Identities = 15/53 (28%), Positives = 28/53 (52%) Frame = -1 Query: 688 KCFIEEIPDDTTVIVNYKVELYDPKSGGFMQTTPGIGMHVEVRDPNDRILLSR 530 K ++EE D I +EL+D +SG ++ + +++ V P++ L SR Sbjct: 629 KGYLEEEADLQEAIKKSLLELHDKESGDVLEENQSVRVNLVVDKPSEDSLCSR 681 >At5g43900.1 68418.m05368 myosin heavy chain (MYA2) nearly identical to PIR|S51824 myosin heavy chain MYA2 [Arabidopsis thaliana] Length = 1505 Score = 27.9 bits (59), Expect = 7.7 Identities = 14/46 (30%), Positives = 22/46 (47%) Frame = -1 Query: 589 PGIGMHVEVRDPNDRILLSRVYSLEGMISFTSSTPGEHVICMYSNS 452 P +G V V DP++ + V + G T G+HV+ SN+ Sbjct: 7 PSVGSFVWVEDPDEAWIDGEVVQVNGDEIKVLCTSGKHVVTKISNA 52 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,054,688 Number of Sequences: 28952 Number of extensions: 294405 Number of successful extensions: 878 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 832 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 870 length of database: 12,070,560 effective HSP length: 79 effective length of database: 9,783,352 effective search space used: 1682736544 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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