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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10f21r
         (757 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g09580.1 68414.m01075 emp24/gp25L/p24 family protein similar ...   102   2e-22
At1g69460.1 68414.m07981 emp24/gp25L/p24 family protein similar ...   101   7e-22
At1g57620.1 68414.m06539 emp24/gp25L/p24 family protein similar ...    96   2e-20
At1g21900.1 68414.m02741 emp24/gp25L/p24 family protein similar ...    94   8e-20
At1g14010.1 68414.m01654 emp24/gp25L/p24 family protein similar ...    88   7e-18
At1g26690.1 68414.m03251 emp24/gp25L/p24 family protein similar ...    86   2e-17
At2g03290.1 68415.m00284 emp24/gp25L/p24 family protein similar ...    83   2e-16
At3g29070.1 68416.m03636 emp24/gp25L/p24 family protein similar ...    77   2e-14
At2g03040.1 68415.m00257 transmembrane protein-related low simil...    58   8e-09
At1g74630.1 68414.m08643 pentatricopeptide (PPR) repeat-containi...    36   0.029
At4g20770.1 68417.m03016 pentatricopeptide (PPR) repeat-containi...    29   2.5  
At1g07900.1 68414.m00859 LOB domain protein 1 / lateral organ bo...    29   2.5  
At2g25790.1 68415.m03095 leucine-rich repeat transmembrane prote...    29   3.3  
At1g11720.1 68414.m01345 starch synthase, putative strong simila...    29   4.4  
At3g28030.1 68416.m03499 UV hypersensitive protein (UVH3) / DNA-...    28   5.8  
At5g43900.1 68418.m05368 myosin heavy chain (MYA2) nearly identi...    28   7.7  

>At1g09580.1 68414.m01075 emp24/gp25L/p24 family protein similar to
           SP|P49755 Transmembrane protein Tmp21 precursor (21 kDa
           Transmembrane trafficking protein) {Homo sapiens};
           contains Pfam profile PF01105: emp24/gp25L/p24 family
          Length = 217

 Score =  102 bits (245), Expect = 2e-22
 Identities = 60/209 (28%), Positives = 105/209 (50%)
 Frame = -1

Query: 757 LLVIALLADCASALYFHIAEGERKCFIEEIPDDTTVIVNYKVELYDPKSGGFMQTTPGIG 578
           L ++ ++     A++  +     KC  EEI  +  V+ +Y +   D       +  P I 
Sbjct: 18  LFLVPVMIPVGEAVWLDVPPTGTKCVSEEIQSNVVVLADYLIISEDH------EVMPTIS 71

Query: 577 MHVEVRDPNDRILLSRVYSLEGMISFTSSTPGEHVICMYSNSTSWFSGSQLRVHLDIQVG 398
             V+V  P    L +      G  +FT+   G ++ C +++  S      + +++D + G
Sbjct: 72  --VKVTSPYGNNLHNMENVTHGQFAFTTQESGNYLACFWADEKS-HGNKNVSINIDWRTG 128

Query: 397 EHAVDYANVAQKEKLTELQLRIRQLLDQVHQITKEQAYQRQREERFRQTSESTNQRVLWW 218
             A D+A++A+KEK+  ++L IR+L   V  I +   Y R RE   R  SE TN RV W+
Sbjct: 129 IAAKDWASIAKKEKIEGVELEIRKLEGAVEAIHENILYLRNREADMRTMSEKTNSRVAWY 188

Query: 217 SLLQTGVLVIIGYWQMRHLKSFFEAKKLV 131
           S++  GV + +  +Q+ +LK +FE KKL+
Sbjct: 189 SIMSLGVCIAVSGFQVLYLKQYFEKKKLI 217


>At1g69460.1 68414.m07981 emp24/gp25L/p24 family protein similar to
           SP|Q28735 Transmembrane protein Tmp21 precursor (21 kDa
           Transmembrane trafficking protein) {Oryctolagus
           cuniculus}; contains Pfam profile: PF01105:
           emp24/gp25L/p24 family
          Length = 214

 Score =  101 bits (241), Expect = 7e-22
 Identities = 57/209 (27%), Positives = 107/209 (51%)
 Frame = -1

Query: 757 LLVIALLADCASALYFHIAEGERKCFIEEIPDDTTVIVNYKVELYDPKSGGFMQTTPGIG 578
           LL++A+ +  + +L+F +  G  KC  E+I  ++  +  Y ++  +P  G  +  T  I 
Sbjct: 12  LLILAIWSPISHSLHFDLHSGRTKCIAEDIKSNSMTVGKYNID--NPHEGQALPQTHKIS 69

Query: 577 MHVEVRDPNDRILLSRVYSLEGMISFTSSTPGEHVICMYSNSTSWFSGSQLRVHLDIQVG 398
           + V     N+     +V S  G  +F++   G+++ C    +        L +  + + G
Sbjct: 70  VKVTSNSGNNYHHAEQVDS--GQFAFSAVEAGDYMACF--TAVDHKPEVSLSIDFEWKTG 125

Query: 397 EHAVDYANVAQKEKLTELQLRIRQLLDQVHQITKEQAYQRQREERFRQTSESTNQRVLWW 218
             +  +ANVA+K ++  ++  ++ LLD V+ I +E  Y R REE  +  + STN ++ W 
Sbjct: 126 VQSKSWANVAKKSQVEVMEFEVKSLLDTVNSIHEEMYYLRDREEEMQDLNRSTNTKMAWL 185

Query: 217 SLLQTGVLVIIGYWQMRHLKSFFEAKKLV 131
           S+L   V + +   Q  HLK+FFE KK++
Sbjct: 186 SVLSFFVCIGVAGMQFLHLKTFFEKKKVI 214


>At1g57620.1 68414.m06539 emp24/gp25L/p24 family protein similar to
           SP|P49755 Transmembrane protein Tmp21 precursor (21 kDa
           Transmembrane trafficking protein) {Homo sapiens};
           contains Pfam profile PF01105: emp24/gp25L/p24 family
          Length = 212

 Score = 96.3 bits (229), Expect = 2e-20
 Identities = 58/207 (28%), Positives = 104/207 (50%)
 Frame = -1

Query: 751 VIALLADCASALYFHIAEGERKCFIEEIPDDTTVIVNYKVELYDPKSGGFMQTTPGIGMH 572
           +I  L+    A++  +     KC  EEI  +  V+ +Y V + +  S       P +   
Sbjct: 15  LIFSLSPICEAVWLTVPHTGSKCVSEEIQSNVIVLADYLV-ISEEHS-----IFPTVS-- 66

Query: 571 VEVRDPNDRILLSRVYSLEGMISFTSSTPGEHVICMYSNSTSWFSGSQLRVHLDIQVGEH 392
           V+V  P   +L  R  +  G  +FT+   G ++ C  +++ S        +++D + G  
Sbjct: 67  VKVTAPYGTVLHHRENTTNGQFAFTTQESGTYLACFEADAKS-HGNKDFSINIDWKTGIA 125

Query: 391 AVDYANVAQKEKLTELQLRIRQLLDQVHQITKEQAYQRQREERFRQTSESTNQRVLWWSL 212
           A D+ ++A+KEK+  ++L  ++L   V  I +   Y R RE   R  SE TN RV W+S+
Sbjct: 126 AKDWDSIARKEKIEGVELEFKKLEGAVEAIHENLIYLRNREAEMRIVSEKTNSRVAWYSI 185

Query: 211 LQTGVLVIIGYWQMRHLKSFFEAKKLV 131
           +  G+ +++   Q+ +LK +FE KKL+
Sbjct: 186 MSLGICIVVSGLQILYLKQYFEKKKLI 212


>At1g21900.1 68414.m02741 emp24/gp25L/p24 family protein similar to
           SP|O35587 Transmembrane protein Tmp21 precursor (21 kDa
           Transmembrane trafficking protein) {Mesocricetus
           auratus}; contains Pfam profile PF01105: emp24/gp25L/p24
           family
          Length = 216

 Score = 94.3 bits (224), Expect = 8e-20
 Identities = 60/211 (28%), Positives = 113/211 (53%), Gaps = 2/211 (0%)
 Frame = -1

Query: 757 LLVIALLADCASALYFHI-AEGERKCFIEEIPDDTTVIVNYKV-ELYDPKSGGFMQTTPG 584
           +++  L  +   A++  I   G  KC  EEI  +  V+ +Y V + ++P++      TP 
Sbjct: 15  VVLFFLTVNYGEAIWLTIPTTGGTKCVSEEIQSNVVVLADYYVVDEHNPEN------TPA 68

Query: 583 IGMHVEVRDPNDRILLSRVYSLEGMISFTSSTPGEHVICMYSNSTSWFSGSQLRVHLDIQ 404
           +    +V  P    L  +     G  +FT+   G ++ C + +S+   + + + + +D +
Sbjct: 69  VSS--KVTSPYGNNLHHQENVTHGQFAFTTQEAGNYLACFWIDSSHHLA-NPITLGVDWK 125

Query: 403 VGEHAVDYANVAQKEKLTELQLRIRQLLDQVHQITKEQAYQRQREERFRQTSESTNQRVL 224
           +G  A D+ +VA+KEK+  ++L++R+L   V  I +   Y + RE   R+ SE+TN RV 
Sbjct: 126 MGIAAKDWDSVAKKEKIEGVELQLRRLEGLVLSIRENLNYIKDREAEMREVSETTNSRVA 185

Query: 223 WWSLLQTGVLVIIGYWQMRHLKSFFEAKKLV 131
           W+S++  GV V++   Q+ +LK +F  KKL+
Sbjct: 186 WFSIMSLGVCVVVVGSQILYLKRYFHKKKLI 216


>At1g14010.1 68414.m01654 emp24/gp25L/p24 family protein similar to
           SP|P49755 Transmembrane protein Tmp21 precursor (21 kDa
           Transmembrane trafficking protein) {Homo sapiens};
           contains Pfam profile PF01105: emp24/gp25L/p24 family
          Length = 212

 Score = 87.8 bits (208), Expect = 7e-18
 Identities = 52/209 (24%), Positives = 99/209 (47%)
 Frame = -1

Query: 757 LLVIALLADCASALYFHIAEGERKCFIEEIPDDTTVIVNYKVELYDPKSGGFMQTTPGIG 578
           LL++++L+    ++ + +  G  KC  EEI  +   I  Y +   +P     + ++  + 
Sbjct: 10  LLILSILSPVTLSIRYELLSGHTKCISEEIHANAMTIGKYSI--INPHEDHPLPSSHKVT 67

Query: 577 MHVEVRDPNDRILLSRVYSLEGMISFTSSTPGEHVICMYSNSTSWFSGSQLRVHLDIQVG 398
             V V  P             G  SF +   G+++ C   ++      + L +  D + G
Sbjct: 68  --VRVTSPQGTAYHESDGVESGQFSFVAVETGDYISCF--SAVDHKPETTLIIDFDWRTG 123

Query: 397 EHAVDYANVAQKEKLTELQLRIRQLLDQVHQITKEQAYQRQREERFRQTSESTNQRVLWW 218
            H  D++NVA+K ++  ++  +++L + V+ I  E  Y R REE     + +TN ++ W 
Sbjct: 124 IHTKDWSNVAKKSQVETMEFEVKKLFETVNGIHDEMFYLRDREEEMHNLNIATNSKMAWL 183

Query: 217 SLLQTGVLVIIGYWQMRHLKSFFEAKKLV 131
           S +   V + +   Q  HLK+FF+ KKL+
Sbjct: 184 SFVSLAVCLSVAGLQFWHLKTFFQKKKLI 212


>At1g26690.1 68414.m03251 emp24/gp25L/p24 family protein similar to
           SP|P49755 Transmembrane protein Tmp21 precursor (21 kDa
           Transmembrane trafficking protein) {Homo sapiens};
           contains Pfam profile PF01105: emp24/gp25L/p24 family
          Length = 214

 Score = 86.2 bits (204), Expect = 2e-17
 Identities = 53/209 (25%), Positives = 102/209 (48%)
 Frame = -1

Query: 757 LLVIALLADCASALYFHIAEGERKCFIEEIPDDTTVIVNYKVELYDPKSGGFMQTTPGIG 578
           LL +A+ +  + +L+F +  G  KC  E+I  ++  +  Y V   +P        +  I 
Sbjct: 12  LLFLAISSQVSQSLHFELQSGRTKCISEDIKSNSMTVGKYTV--VNPNEAHPSPQSHKIS 69

Query: 577 MHVEVRDPNDRILLSRVYSLEGMISFTSSTPGEHVICMYSNSTSWFSGSQLRVHLDIQVG 398
           + V     N       V S  G  +FT+   G+++ C    +        L +  D + G
Sbjct: 70  IRVTSSYGNTYHHAEDVES--GQFAFTAVESGDYMACY--TAVDHKPEVTLSIDFDWRTG 125

Query: 397 EHAVDYANVAQKEKLTELQLRIRQLLDQVHQITKEQAYQRQREERFRQTSESTNQRVLWW 218
             +  +++VA+K ++  ++  +++L++ V+ I +E  Y R+REE  +  + +TN ++ W 
Sbjct: 126 VQSKSWSSVAKKSQVEVMEFDVKRLIETVNSIHEEMFYLREREEEMQNLNRATNSKMAWL 185

Query: 217 SLLQTGVLVIIGYWQMRHLKSFFEAKKLV 131
           S L   V + +   Q  HLK+FFE KK++
Sbjct: 186 SFLSLFVCLGVAGMQFVHLKTFFEKKKVI 214


>At2g03290.1 68415.m00284 emp24/gp25L/p24 family protein similar to
           SP|P49755 Transmembrane protein Tmp21 precursor (21 kDa
           Transmembrane trafficking protein) {Homo sapiens};
           contains Pfam profile PF01105: emp24/gp25L/p24 family
          Length = 170

 Score = 83.0 bits (196), Expect = 2e-16
 Identities = 45/147 (30%), Positives = 78/147 (53%)
 Frame = -1

Query: 571 VEVRDPNDRILLSRVYSLEGMISFTSSTPGEHVICMYSNSTSWFSGSQLRVHLDIQVGEH 392
           V+V  P  + L        G  SFT+   G +V C+   +  +   + L +  D + G H
Sbjct: 26  VKVMPPQGKNLHEADKVEAGQFSFTAYENGSYVACI--TAIDYKPETTLTIDFDWKTGVH 83

Query: 391 AVDYANVAQKEKLTELQLRIRQLLDQVHQITKEQAYQRQREERFRQTSESTNQRVLWWSL 212
           + ++ NVA+K ++  ++ +++ L+D V  I +E  Y R+REE  ++ + STN ++ W S 
Sbjct: 84  SKEWTNVAKKSQVDMMEYQVKTLMDTVISIHEEMYYLREREEEMQELNRSTNSKMAWLSF 143

Query: 211 LQTGVLVIIGYWQMRHLKSFFEAKKLV 131
               V + +   Q  HLK+FFE KKL+
Sbjct: 144 GSLVVCLSVAGLQFWHLKTFFEKKKLI 170


>At3g29070.1 68416.m03636 emp24/gp25L/p24 family protein similar to
           SP|Q28735 Transmembrane protein Tmp21 precursor (21 kDa
           Transmembrane trafficking protein) {Oryctolagus
           cuniculus}; contains Pfam profile: PF01105
           emp24/gp25L/p24 family
          Length = 204

 Score = 76.6 bits (180), Expect = 2e-14
 Identities = 50/189 (26%), Positives = 89/189 (47%)
 Frame = -1

Query: 697 GERKCFIEEIPDDTTVIVNYKVELYDPKSGGFMQTTPGIGMHVEVRDPNDRILLSRVYSL 518
           G  KC  ++I  +   +  Y +   +P  G  +   P   + V V  P  +         
Sbjct: 22  GNTKCISDDIKTNYMTVGTYSI--VNPNEGHHLP--PSHKLFVTVSSPKGKSHHHAENVE 77

Query: 517 EGMISFTSSTPGEHVICMYSNSTSWFSGSQLRVHLDIQVGEHAVDYANVAQKEKLTELQL 338
            G   FT+   G+++ C  +    +   ++  V  + + G  A D+  +A++ ++T L++
Sbjct: 78  SGKFVFTAEETGDYMTCFVA--PGYRPTAKFAVDFEWKSGVEAKDWTTIAKRGQITMLEV 135

Query: 337 RIRQLLDQVHQITKEQAYQRQREERFRQTSESTNQRVLWWSLLQTGVLVIIGYWQMRHLK 158
            +R+LLD    I +E     +RE   ++ + STN R+   SLL   V + +   Q+RHLK
Sbjct: 136 EVRKLLDVTETIHEEMFQLIEREREMQELNRSTNSRMAALSLLSFVVTMSVAGLQLRHLK 195

Query: 157 SFFEAKKLV 131
           SF E KKL+
Sbjct: 196 SFLERKKLL 204


>At2g03040.1 68415.m00257 transmembrane protein-related low
           similarity to SP|Q28735|TM21_RABIT Transmembrane protein
           Tmp21 precursor (21 kDa Transmembrane trafficking
           protein) (Integral membrane protein p23) {Oryctolagus
           cuniculus}
          Length = 166

 Score = 57.6 bits (133), Expect = 8e-09
 Identities = 41/162 (25%), Positives = 77/162 (47%)
 Frame = -1

Query: 757 LLVIALLADCASALYFHIAEGERKCFIEEIPDDTTVIVNYKVELYDPKSGGFMQTTPGIG 578
           LL+IALL+    ++ + +   + KC  EEI ++   I  Y +   +P             
Sbjct: 10  LLIIALLSPRTLSMRYELKSSKTKCIGEEIHENAMSIGKYFI--VNPNEDHH-PLPDSHK 66

Query: 577 MHVEVRDPNDRILLSRVYSLEGMISFTSSTPGEHVICMYSNSTSWFSGSQLRVHLDIQVG 398
           + V+V  P  + L        G  SFT+   G +V C+   +  +   + L +  D + G
Sbjct: 67  IIVKVMPPQGKNLHEADNVEAGQFSFTAYENGSYVACI--TAIDYKPETTLTIDFDWKTG 124

Query: 397 EHAVDYANVAQKEKLTELQLRIRQLLDQVHQITKEQAYQRQR 272
            H+ ++ NVA+K ++  ++ +++ L+D V  I +E  Y R+R
Sbjct: 125 VHSKEWTNVAKKSQVDMMEYQVKTLMDTVISIHEEMYYLRER 166


>At1g74630.1 68414.m08643 pentatricopeptide (PPR) repeat-containing
           protein contains Pfam profile PF01535: PPR repeat
          Length = 643

 Score = 35.9 bits (79), Expect = 0.029
 Identities = 36/160 (22%), Positives = 66/160 (41%), Gaps = 3/160 (1%)
 Frame = -1

Query: 682 FIEEIPDDTTVIVNYKVELYDPKSGGFMQTTPGIGMHVEVRDPN---DRILLSRVYSLEG 512
           FI ++P   T IV ++  L    S G ++    +   +   DPN   D +LLS  Y+  G
Sbjct: 429 FICQMPIPPTAIV-WRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAG 487

Query: 511 MISFTSSTPGEHVICMYSNSTSWFSGSQLRVHLDIQVGEHAVDYANVAQKEKLTELQLRI 332
                +S     ++     +T+W      +       GE      ++   EKL E+ LR+
Sbjct: 488 KWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKG-IDIEAHEKLKEIILRL 546

Query: 331 RQLLDQVHQITKEQAYQRQREERFRQTSESTNQRVLWWSL 212
           +       ++     Y  + EE+  Q S+ + +  L ++L
Sbjct: 547 KDEAGYTPEVA-SALYDVEEEEKEDQVSKHSEKLALAFAL 585


>At4g20770.1 68417.m03016 pentatricopeptide (PPR) repeat-containing
           protein contains Pfam profile PF01535: PPR repeat
          Length = 740

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 21/67 (31%), Positives = 28/67 (41%)
 Frame = +1

Query: 448 KCY*STCILHVHQECWM*MRSFLPTNRLETTVFYHSDRGLQRACLCPVLFA*IRQISDRI 627
           +C    CI  +   CW  M S    N L+T       R  Q A LCP   +    +    
Sbjct: 437 ECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETS-FATVLSSC 495

Query: 628 TRLCNLL 648
           +RLC+LL
Sbjct: 496 SRLCSLL 502


>At1g07900.1 68414.m00859 LOB domain protein 1 / lateral organ
           boundaries domain protein 1 (LBD1) identical to
           SP|Q9LQR0 LOB domain protein 1 {Arabidopsis thaliana}
          Length = 190

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
 Frame = -1

Query: 418 HLDIQVGEHAVDYANVAQKEKLTELQLRIRQLLDQVHQITKEQAYQRQR------EERFR 257
           HL  QV E     A  AQ E +  +Q +   LL+ ++ + ++Q  ++        +  F 
Sbjct: 114 HLQRQVSELQAQLAK-AQVE-MVNMQFQRSNLLELIYNMDQQQKQEQDNMSFESNDLGFL 171

Query: 256 QTSESTNQRVLWWSLLQT 203
           +   +TN  +LWW  L T
Sbjct: 172 EDKSNTNSSMLWWDPLWT 189


>At2g25790.1 68415.m03095 leucine-rich repeat transmembrane protein
           kinase, putative
          Length = 960

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 14/50 (28%), Positives = 26/50 (52%)
 Frame = +3

Query: 456 LEYMHITCSPGVLDVNEIIPSNE*TRDNSILSFGSRTSTCMPMPGVVCMN 605
           L ++H  CSP V+  N + P      +N ++        C+ +PG++CM+
Sbjct: 789 LRFLHCRCSPAVVAGN-LSP------ENIVIDVTDEPRLCLGLPGLLCMD 831


>At1g11720.1 68414.m01345 starch synthase, putative strong
           similarity to soluble-starch-synthase [Solanum
           tuberosum] GI:1911166
          Length = 1025

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 23/104 (22%), Positives = 50/104 (48%), Gaps = 4/104 (3%)
 Frame = -1

Query: 415 LDIQVGEHAVDYANVAQKEKLTELQLRIRQLLDQVHQITKEQAYQRQR----EERFRQTS 248
           ++I+ G   VD+ N   +EKL E +   ++  ++  Q  +++  + Q+     +R +  +
Sbjct: 218 VEIKGGMDKVDFENFLLEEKLREQEKLAKEEAERERQKEEKRRIEAQKAAIEADRAQAKA 277

Query: 247 ESTNQRVLWWSLLQTGVLVIIGYWQMRHLKSFFEAKKLV*MNYN 116
           E+  +R L    ++  V+     W +    S F+A+  V + YN
Sbjct: 278 ETQKRRELLQPAIKKAVVSAENVWYIE--PSDFKAEDTVKLYYN 319


>At3g28030.1 68416.m03499 UV hypersensitive protein (UVH3) /
           DNA-repair protein, putative identical to UV
           hypersensitive protein [Arabidopsis thaliana]
           gi|13649704|gb|AAK37472; similar to Swiss-Prot:P14629
           DNA-repair protein complementing XP-G cells homolog
           (Xeroderma pigmentosum group G complementing protein
           homolog) [Xenopus laevis]
          Length = 1479

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 15/53 (28%), Positives = 28/53 (52%)
 Frame = -1

Query: 688 KCFIEEIPDDTTVIVNYKVELYDPKSGGFMQTTPGIGMHVEVRDPNDRILLSR 530
           K ++EE  D    I    +EL+D +SG  ++    + +++ V  P++  L SR
Sbjct: 629 KGYLEEEADLQEAIKKSLLELHDKESGDVLEENQSVRVNLVVDKPSEDSLCSR 681


>At5g43900.1 68418.m05368 myosin heavy chain (MYA2) nearly identical
           to PIR|S51824 myosin heavy chain MYA2 [Arabidopsis
           thaliana]
          Length = 1505

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = -1

Query: 589 PGIGMHVEVRDPNDRILLSRVYSLEGMISFTSSTPGEHVICMYSNS 452
           P +G  V V DP++  +   V  + G       T G+HV+   SN+
Sbjct: 7   PSVGSFVWVEDPDEAWIDGEVVQVNGDEIKVLCTSGKHVVTKISNA 52


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,054,688
Number of Sequences: 28952
Number of extensions: 294405
Number of successful extensions: 878
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 832
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 870
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1682736544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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