Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10f16f
         (641 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70750-8|CAA94743.1|  300|Caenorhabditis elegans Hypothetical pr...    29   2.1  
U21321-6|AAG00046.1|  206|Caenorhabditis elegans Hypothetical pr...    29   2.8  
Z19154-5|CAA79557.1|  162|Caenorhabditis elegans Hypothetical pr...    28   6.5  
Z93374-4|CAB07556.1|  834|Caenorhabditis elegans Hypothetical pr...    27   8.6  

>Z70750-8|CAA94743.1|  300|Caenorhabditis elegans Hypothetical
           protein C50F4.8 protein.
          Length = 300

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 16/57 (28%), Positives = 25/57 (43%)
 Frame = +1

Query: 244 GCDTIAYCTMRCGVPIING*SHSESVSAQWLVLKPEISGQKTCALDSSDAGLWIGYC 414
           GC+ I  CT+ C VP I     SE+      + +   +  +  ALD++    W   C
Sbjct: 182 GCEYIT-CTLHCDVPTIAHECDSETAQLVIDLTRKSFASMEKMALDTNAVAKWPQVC 237


>U21321-6|AAG00046.1|  206|Caenorhabditis elegans Hypothetical
           protein ZK177.3 protein.
          Length = 206

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +1

Query: 559 SNQCIQTNSHWHWHLRVADVIHC 627
           S Q     SH+H H+R ++VIHC
Sbjct: 46  STQKTGLTSHYHGHIRQSNVIHC 68


>Z19154-5|CAA79557.1|  162|Caenorhabditis elegans Hypothetical
           protein C40H1.6 protein.
          Length = 162

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +1

Query: 376 LDSSDAGL-WIGYCWIFH*NYRQEHALEY 459
           L+S++ G  W G CW FH   + E  +E+
Sbjct: 55  LESNERGTKWFGKCWYFHNMVKYEFDVEF 83


>Z93374-4|CAB07556.1|  834|Caenorhabditis elegans Hypothetical
           protein C06C6.6 protein.
          Length = 834

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +2

Query: 422 FIKIIDKSTHLNTLHGKFAIAALVFTTVSLING 520
           F + +D +   NTL  K   AA V T +++ING
Sbjct: 73  FARAVDDNEDPNTLFEKLPGAARVVTAIAIING 105


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,839,819
Number of Sequences: 27780
Number of extensions: 344782
Number of successful extensions: 927
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 926
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)