Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10f15r
(699 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26408| Best HMM Match : Lipase (HMM E-Value=0) 108 4e-24
SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.) 96 3e-20
SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41) 86 3e-17
SB_7713| Best HMM Match : Lipase (HMM E-Value=0.0064) 59 3e-09
SB_43904| Best HMM Match : Lipase (HMM E-Value=5e-07) 52 4e-07
SB_4617| Best HMM Match : Extensin_2 (HMM E-Value=0.38) 29 0.54
SB_5209| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_19258| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_58542| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_27171| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_22961| Best HMM Match : Abhydrolase_1 (HMM E-Value=0.043) 29 4.8
SB_3986| Best HMM Match : C2 (HMM E-Value=2.9e-31) 28 6.3
>SB_26408| Best HMM Match : Lipase (HMM E-Value=0)
Length = 714
Score = 108 bits (260), Expect = 4e-24
Identities = 71/193 (36%), Positives = 100/193 (51%), Gaps = 19/193 (9%)
Frame = -1
Query: 690 LTSGDYNVIVVDWSSFSLSTYSTAVMAVTGVGSSIATFLKNLK----LPLNKVHIVGFNL 523
L GD+NVI+VDW + ++ AV VG+ A L+ L+ L VH++GF+
Sbjct: 139 LWEGDFNVIIVDWMRGAWFPFTRAVANTRLVGAQTARLLQILEERSGRKLAYVHVIGFSF 198
Query: 522 GAHVAGVTGRNLEGK---VARITGLDPSARDW---ENNVLRLGTNDAQYVEVIHTDGSGV 361
GAHVAG GR ++ + + RIT LDP+A W + +RL T+DA +V+VIHT
Sbjct: 199 GAHVAGYVGRRMKKRGRMIDRITALDPAAM-WFHKHHEDVRLDTSDALFVDVIHTSAD-- 255
Query: 360 NKNGLGVAIGHIDFFVNGRLVQPGCTN--------NLCSHNRAYEVFAATI-THGKHYGN 208
G+ IGH DF+ NG QPGC N C H RA +F ++ T Y
Sbjct: 256 --YGITSTIGHADFYPNGGKKQPGCDNFFRGFSSYLFCGHKRAPALFTTSLYTKTPLYSY 313
Query: 207 QCSTEAEITANNC 169
C +E + + NC
Sbjct: 314 PCRSEDDFNSGNC 326
>SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 940
Score = 95.9 bits (228), Expect = 3e-20
Identities = 64/173 (36%), Positives = 91/173 (52%), Gaps = 17/173 (9%)
Frame = -1
Query: 696 AFLTSGDYNVIVVDWSSFSLSTYSTAVMAVTGVGSSIATFLKNLKLPLNKV----HIVGF 529
A + D NVI DWS + Y A VG+ I +K L ++VGF
Sbjct: 635 ALIKQEDANVITTDWSRGATIPYEQATANTRMVGAQITELIKFLNNQTGNTPASFYLVGF 694
Query: 528 NLGAHVAGVTGRNLEG---KVARITGLDPSARDWEN-NV-LRLGTNDAQYVEVIHTDGSG 364
+LGAH++G GR + K+ RITGLDP++ + N +V +RL +DA +V+V+HTD
Sbjct: 695 SLGAHISGYVGRRIAKTGQKLNRITGLDPASIHFVNAHVDVRLDPSDADFVDVMHTD--- 751
Query: 363 VNKNGLGVAIGHIDFFVNGRLVQPGCTNNL--------CSHNRAYEVFAATIT 229
++ G GHIDF+ NG QPGC + L C H RA E +A ++T
Sbjct: 752 MDLAGTPTVSGHIDFYPNGGKKQPGCRDLLDGPINYVICDHMRAPEYYAESVT 804
>SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41)
Length = 291
Score = 85.8 bits (203), Expect = 3e-17
Identities = 57/149 (38%), Positives = 82/149 (55%), Gaps = 10/149 (6%)
Frame = -1
Query: 699 DAFLTSGDYNVIVVDWSSFSLSTYSTAVMAVTGVGSSIATFLKN-LKLPLNK----VHIV 535
D L D NVI+VDW + Y AV VG+ +A F+K L L ++ H +
Sbjct: 117 DELLRKSDDNVIIVDWIRGAKIPYVRAVANTRLVGAQVAAFMKTILSLSGSREGGAFHSI 176
Query: 534 GFNLGAHVAGVTGRNLE--GK-VARITGLDPSARDWENNV--LRLGTNDAQYVEVIHTDG 370
GF+LGAH++G G+ L+ G+ + RITGLDP+ ++ +RL DAQ+V+VIHT
Sbjct: 177 GFSLGAHISGYVGQRLKRIGRHLDRITGLDPATLMFKGEAPDVRLDRLDAQFVDVIHTS- 235
Query: 369 SGVNKNGLGVAIGHIDFFVNGRLVQPGCT 283
G+ GH+DF+ NG Q GC+
Sbjct: 236 ---YVFGITAPHGHMDFYPNGGTSQRGCS 261
>SB_7713| Best HMM Match : Lipase (HMM E-Value=0.0064)
Length = 131
Score = 59.3 bits (137), Expect = 3e-09
Identities = 34/85 (40%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Frame = -1
Query: 699 DAFLTSGDYNVIVVDWSSFS--LSTYSTAVMAVTGVGSSIATFLKNLK----LPLNKVHI 538
D L NVI VDW S + L+ Y A VG+ +A + ++ L +VH+
Sbjct: 46 DELLKREPMNVITVDWQSGADGLNLYHVAAGNTRVVGAQLAELITTIQRVFDFDLRRVHL 105
Query: 537 VGFNLGAHVAGVTGRNLEGKVARIT 463
+G +LGAHVAG G L GKV RIT
Sbjct: 106 IGHSLGAHVAGYAGERLSGKVGRIT 130
>SB_43904| Best HMM Match : Lipase (HMM E-Value=5e-07)
Length = 408
Score = 52.0 bits (119), Expect = 4e-07
Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 10/87 (11%)
Frame = -1
Query: 459 LDPSARDWENNVL--RLGTNDAQYVEVIHTDGSGVNKNGLGVAIGHIDFFVNGRLVQPGC 286
LDP+ + N + RL +DA++V+V+HTD ++ G GHIDF+ NG QPGC
Sbjct: 2 LDPAGLYFVNEHVDVRLDPSDAEFVDVMHTD---MDFAGTSTQSGHIDFYPNGGKNQPGC 58
Query: 285 -------TNNL-CSHNRAYEVFAATIT 229
+N L C H RA++ F +IT
Sbjct: 59 RDIADGPSNALKCDHVRAHDYFTESIT 85
>SB_4617| Best HMM Match : Extensin_2 (HMM E-Value=0.38)
Length = 450
Score = 29.5 bits (63), Expect(2) = 0.54
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 290 PGWTRRPLTKKSMC-PIATPKPFLLTPDPSV*ITSTY*ASFVPSRSTLFSQSRAEGSRP 463
P +P+ +C P+ +P P +++P P I + + VP+ TL QS A P
Sbjct: 193 PSPASQPVAPSPVCIPVQSPAPNMMSPSPQQFIAQSPAPTSVPTPGTLNVQSPASILNP 251
Score = 21.0 bits (42), Expect(2) = 0.54
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +2
Query: 584 AILDPTPVTAITAVEYVDKLN 646
++ P P++A Y++KLN
Sbjct: 257 SVTSPAPLSAAEEQAYLEKLN 277
>SB_5209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 67
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 4/31 (12%)
Frame = -1
Query: 540 IVGFNLGAHVAGVTG---RNLEG-KVARITG 460
++GF+LG HVAG G +N G K+ RI+G
Sbjct: 21 VIGFSLGGHVAGYAGSRIKNTTGLKLGRISG 51
>SB_19258| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 459
Score = 29.9 bits (64), Expect = 2.1
Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 3/90 (3%)
Frame = -1
Query: 423 LRLGTNDAQYVEVIHTDGSGVNKNGLGVAI-GHID-FFVNGRLVQPGCTNNLCSHNRAYE 250
+ + +++ ++ + SG + + HID +NG +V PG + Y
Sbjct: 1 MSMSSDEVNFLVYRYLQESGFQHSAFTFGVESHIDQSSINGSVVPPGALVTILQKGVQYV 60
Query: 249 VFAATITHGKHYGNQCSTEAEITANN-CRG 163
AT+T G Y EAE T CRG
Sbjct: 61 EAEATVTEGVQY-----VEAEATVTEVCRG 85
>SB_58542| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = -1
Query: 588 IATFLKNLKLPLNKVHIVGFNLGAHVAGVTGRNLEGKVARITGLDPS 448
+ +FL + + K H+ G ++G H+ GV +VA + + P+
Sbjct: 120 LLSFLHAVGVNKRKFHLAGISMGGHIVGVYAAQHPARVASVIMMCPA 166
>SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2101
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = -1
Query: 324 DFFVNGRLVQPGCTNNLCSHNRAYEVFAATITHGKHYGNQCSTEA 190
D++ ++ G T+ C YE T GK YGN+C A
Sbjct: 1278 DYYAQCQVEDDGSTSCKCPIFCTYEYMPVCGTDGKTYGNKCEMRA 1322
>SB_27171| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 52
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Frame = -1
Query: 357 KNGLGVAIG---HIDFFVNGRLVQPGCTNNLCSHNRA 256
K+ G+ IG H+D VNG VQ C+HN+A
Sbjct: 12 KSSEGMYIGADLHLDKDVNGAYVQGSFIGGFCTHNKA 48
>SB_22961| Best HMM Match : Abhydrolase_1 (HMM E-Value=0.043)
Length = 183
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = -1
Query: 579 FLKNLKLPLNKVHIVGFNLGAHVAGVTGRNLEGKVARITGLDPS 448
FL + + K H+ G ++G H+ GV +VA + + P+
Sbjct: 1 FLHAVGVNKRKFHLAGISMGGHIVGVYAAQHPARVASVIMMCPA 44
>SB_3986| Best HMM Match : C2 (HMM E-Value=2.9e-31)
Length = 778
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +2
Query: 14 VETNFIGHHRKLRFKFCRHHKWN 82
VE NF+GH R+ R CR K N
Sbjct: 233 VERNFVGHRRRCRRVVCRATKSN 255
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,819,232
Number of Sequences: 59808
Number of extensions: 468605
Number of successful extensions: 1119
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1010
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1107
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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