Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10f14r
         (677 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q59SS0 Cluster: Putative uncharacterized protein; n=1; ...    36   0.91 
UniRef50_A4JYI9 Cluster: CDNA, clone cssl:d0139; n=5; Danio reri...    33   6.4  

>UniRef50_Q59SS0 Cluster: Putative uncharacterized protein; n=1;
           Candida albicans|Rep: Putative uncharacterized protein -
           Candida albicans (Yeast)
          Length = 108

 Score = 35.9 bits (79), Expect = 0.91
 Identities = 22/63 (34%), Positives = 35/63 (55%)
 Frame = -3

Query: 246 GLFCMYFNPVSLKISQCIE*LFAIIHNILLVST*VTMD*ILYFIIDSVSSHWSKFEQYSY 67
           GLF +YF P+ + + QCI  L+ I++N+L VST      I+   I ++ SH   F    +
Sbjct: 47  GLFVVYFPPI-IAVHQCIITLY-ILYNVLYVSTCPDQPRIVSLFIFALLSHAFAFRVVDF 104

Query: 66  DFV 58
            F+
Sbjct: 105 IFI 107


>UniRef50_A4JYI9 Cluster: CDNA, clone cssl:d0139; n=5; Danio
           rerio|Rep: CDNA, clone cssl:d0139 - Danio rerio
           (Zebrafish) (Brachydanio rerio)
          Length = 315

 Score = 33.1 bits (72), Expect = 6.4
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = +2

Query: 74  YCSNFDQCEDTLSIIKYKIQSIVTYVLTNNMLCIIANNYSMHCDIFN 214
           Y +   QCE  L +  YK    V+ + T N   I  N Y + CD++N
Sbjct: 89  YINYGKQCEVALPVTVYKTPDSVS-ISTVNQTMIEGNQYELQCDVYN 134


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 556,000,825
Number of Sequences: 1657284
Number of extensions: 9716988
Number of successful extensions: 18100
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 17519
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18098
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52479343733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)