Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10f13r
(569 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT023029-1|AAY55445.1| 112|Drosophila melanogaster IP04046p pro... 31 1.1
AE013599-1627|AAF58432.1| 112|Drosophila melanogaster CG13323-P... 31 1.1
AY102693-1|AAM27522.1| 433|Drosophila melanogaster LD45181p pro... 30 1.9
AE014297-1932|AAF55129.1| 433|Drosophila melanogaster CG6912-PA... 30 1.9
AE013599-1628|AAF58431.1| 112|Drosophila melanogaster CG13324-P... 30 1.9
Y09063-1|CAA70284.1| 653|Drosophila melanogaster 75kDa subunit ... 30 2.5
BT011089-1|AAR82755.1| 770|Drosophila melanogaster RE66734p pro... 30 2.5
AY074995-1|AAL75815.1| 514|Drosophila melanogaster NADH-ubiquin... 30 2.5
AY074994-1|AAL75814.1| 514|Drosophila melanogaster NADH-ubiquin... 30 2.5
AE014298-1159|AAN09230.1| 731|Drosophila melanogaster CG2286-PB... 30 2.5
AE014298-1158|AAF46356.1| 731|Drosophila melanogaster CG2286-PA... 30 2.5
BT003453-1|AAO39456.1| 490|Drosophila melanogaster RH40480p pro... 28 7.7
AE014296-1068|AAF50697.2| 490|Drosophila melanogaster CG7018-PA... 28 7.7
>BT023029-1|AAY55445.1| 112|Drosophila melanogaster IP04046p
protein.
Length = 112
Score = 31.1 bits (67), Expect = 1.1
Identities = 25/88 (28%), Positives = 34/88 (38%), Gaps = 3/88 (3%)
Frame = -2
Query: 418 GSITSSDRLL-RSFVVSRAATTNSRAVNVRYTAPXXXXXXXXXXXG--STQFASVRRTGG 248
G ++D LL R+ V N VNV Y A + AS G
Sbjct: 25 GRRNNNDYLLSRTTEVRNPIKNNYWNVNVNYPAGFYNISAVIVYDNFKNNSGASPSLYSG 84
Query: 247 GVGFTFVNLQFVNAPRRGFSFTVQVWGR 164
G G+ F + RG + TV++WGR
Sbjct: 85 GPGYRFATVNLRGQVNRGINSTVEIWGR 112
>AE013599-1627|AAF58432.1| 112|Drosophila melanogaster CG13323-PA
protein.
Length = 112
Score = 31.1 bits (67), Expect = 1.1
Identities = 25/88 (28%), Positives = 34/88 (38%), Gaps = 3/88 (3%)
Frame = -2
Query: 418 GSITSSDRLL-RSFVVSRAATTNSRAVNVRYTAPXXXXXXXXXXXG--STQFASVRRTGG 248
G ++D LL R+ V N VNV Y A + AS G
Sbjct: 25 GRRNNNDYLLSRTTEVRNPIKNNYWNVNVNYPAGFYNISAVIVYDNFKNNSGASPSLYSG 84
Query: 247 GVGFTFVNLQFVNAPRRGFSFTVQVWGR 164
G G+ F + RG + TV++WGR
Sbjct: 85 GPGYRFATVNLRGQVNRGINSTVEIWGR 112
>AY102693-1|AAM27522.1| 433|Drosophila melanogaster LD45181p
protein.
Length = 433
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/64 (29%), Positives = 23/64 (35%)
Frame = +3
Query: 168 PQTCTVKLNPLRGAFTN*RFTKVKPTPPPVRRTLANCVDPRTRTALTRLPAGAVYLTLTA 347
P T T P T T T P T P T LTR P G++Y
Sbjct: 117 PTTTTTTTEPTTTTTTT-EPTTTTTTTEPTTTTTTTTTAPPVITELTRCPPGSIYFDSQC 175
Query: 348 RELV 359
R++V
Sbjct: 176 RKIV 179
>AE014297-1932|AAF55129.1| 433|Drosophila melanogaster CG6912-PA
protein.
Length = 433
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/64 (29%), Positives = 23/64 (35%)
Frame = +3
Query: 168 PQTCTVKLNPLRGAFTN*RFTKVKPTPPPVRRTLANCVDPRTRTALTRLPAGAVYLTLTA 347
P T T P T T T P T P T LTR P G++Y
Sbjct: 117 PTTTTTTTEPTTTTTTT-EPTTTTTTTEPTTTTTTTTTAPPVITELTRCPPGSIYFDSQC 175
Query: 348 RELV 359
R++V
Sbjct: 176 RKIV 179
>AE013599-1628|AAF58431.1| 112|Drosophila melanogaster CG13324-PA
protein.
Length = 112
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -2
Query: 271 ASVRRTGGGVGFTFVNLQFVNAPRRGFSFTVQVWGR 164
AS GG G+ F + RG TV++WGR
Sbjct: 77 ASPSLYSGGPGYRFATVNLRGQVNRGIDSTVEIWGR 112
>Y09063-1|CAA70284.1| 653|Drosophila melanogaster 75kDa subunit
NADH:biquinone reductaseprecursor protein.
Length = 653
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 435 DLSVDLGSATSLVDTATIAVNTNNRANFILQETCTGTQ 548
DL LGS + IA T+NRAN++L T G +
Sbjct: 369 DLLNRLGSEVVATEQGFIAGGTDNRANYLLNSTIAGLE 406
>BT011089-1|AAR82755.1| 770|Drosophila melanogaster RE66734p
protein.
Length = 770
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 435 DLSVDLGSATSLVDTATIAVNTNNRANFILQETCTGTQ 548
DL LGS + IA T+NRAN++L T G +
Sbjct: 408 DLLNRLGSEVVATEQGFIAGGTDNRANYLLNSTIAGLE 445
>AY074995-1|AAL75815.1| 514|Drosophila melanogaster NADH-ubiquinone
reductase 75 kDasubunit precursor protein.
Length = 514
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 435 DLSVDLGSATSLVDTATIAVNTNNRANFILQETCTGTQ 548
DL LGS + IA T+NRAN++L T G +
Sbjct: 369 DLLNRLGSEVVATEQGFIAGGTDNRANYLLNSTIAGLE 406
>AY074994-1|AAL75814.1| 514|Drosophila melanogaster NADH-ubiquinone
reductase 75 kDasubunit precursor protein.
Length = 514
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 435 DLSVDLGSATSLVDTATIAVNTNNRANFILQETCTGTQ 548
DL LGS + IA T+NRAN++L T G +
Sbjct: 369 DLLNRLGSEVVATEQGFIAGGTDNRANYLLNSTIAGLE 406
>AE014298-1159|AAN09230.1| 731|Drosophila melanogaster CG2286-PB,
isoform B protein.
Length = 731
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 435 DLSVDLGSATSLVDTATIAVNTNNRANFILQETCTGTQ 548
DL LGS + IA T+NRAN++L T G +
Sbjct: 369 DLLNRLGSEVVATEQGFIAGGTDNRANYLLNSTIAGLE 406
>AE014298-1158|AAF46356.1| 731|Drosophila melanogaster CG2286-PA,
isoform A protein.
Length = 731
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 435 DLSVDLGSATSLVDTATIAVNTNNRANFILQETCTGTQ 548
DL LGS + IA T+NRAN++L T G +
Sbjct: 369 DLLNRLGSEVVATEQGFIAGGTDNRANYLLNSTIAGLE 406
>BT003453-1|AAO39456.1| 490|Drosophila melanogaster RH40480p
protein.
Length = 490
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +2
Query: 335 HVDSPRVSCSSTAHNKAP*ESIT*SNTSDTQSVRSISGSGVSHFISRHRDDRGQY 499
H +P S S++ H + SNTS T S SG G S S ++ G +
Sbjct: 216 HAAAPSSSSSASDHQQGRISGSKSSNTSGTGGGASASGGGGSALYSSYKSSWGSH 270
>AE014296-1068|AAF50697.2| 490|Drosophila melanogaster CG7018-PA,
isoform A protein.
Length = 490
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +2
Query: 335 HVDSPRVSCSSTAHNKAP*ESIT*SNTSDTQSVRSISGSGVSHFISRHRDDRGQY 499
H +P S S++ H + SNTS T S SG G S S ++ G +
Sbjct: 216 HAAAPSSSSSASDHQQGRISGSKSSNTSGTGGGASASGGGGSALYSSYKSSWGSH 270
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,463,984
Number of Sequences: 53049
Number of extensions: 391950
Number of successful extensions: 1117
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1094
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1117
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2234671092
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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