Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10f10r
(659 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92970-1|CAB07480.1| 488|Caenorhabditis elegans Hypothetical pr... 65 5e-11
AB072567-1|BAB88817.1| 488|Caenorhabditis elegans ceERp57 protein. 65 5e-11
L15188-9|AAM22024.1| 618|Caenorhabditis elegans Hypothetical pr... 38 0.005
Z77657-7|CAH60768.1| 320|Caenorhabditis elegans Hypothetical pr... 32 0.41
Z37139-1|CAA85491.1| 485|Caenorhabditis elegans Hypothetical pr... 29 3.9
U95074-1|AAB94647.1| 485|Caenorhabditis elegans protein disulph... 29 3.9
AF039053-5|AAC25875.2| 293|Caenorhabditis elegans Serpentine re... 29 3.9
AF016420-1|AAB65307.2| 310|Caenorhabditis elegans Serpentine re... 28 6.8
Z81114-1|CAB03285.1| 454|Caenorhabditis elegans Hypothetical pr... 27 8.9
AL022270-1|CAB63432.1| 1270|Caenorhabditis elegans Hypothetical ... 27 8.9
>Z92970-1|CAB07480.1| 488|Caenorhabditis elegans Hypothetical
protein H06O01.1 protein.
Length = 488
Score = 64.9 bits (151), Expect = 5e-11
Identities = 25/54 (46%), Positives = 37/54 (68%)
Frame = -2
Query: 658 GFPTIFWKPKDSSKKPQRYNGGRALEDFIKYVSEQATSELKGWDRKGNAKQGKE 497
GFPT+FW PK++ P YNGGR ++DF+ ++S+ +T LKG+ R G K+ E
Sbjct: 434 GFPTLFWLPKNAKSNPIPYNGGREVKDFVSFISKHSTDGLKGFSRDGKKKKKTE 487
>AB072567-1|BAB88817.1| 488|Caenorhabditis elegans ceERp57 protein.
Length = 488
Score = 64.9 bits (151), Expect = 5e-11
Identities = 25/54 (46%), Positives = 37/54 (68%)
Frame = -2
Query: 658 GFPTIFWKPKDSSKKPQRYNGGRALEDFIKYVSEQATSELKGWDRKGNAKQGKE 497
GFPT+FW PK++ P YNGGR ++DF+ ++S+ +T LKG+ R G K+ E
Sbjct: 434 GFPTLFWLPKNAKSNPIPYNGGREVKDFVSFISKHSTDGLKGFSRDGKKKKKTE 487
>L15188-9|AAM22024.1| 618|Caenorhabditis elegans Hypothetical
protein C14B9.2 protein.
Length = 618
Score = 38.3 bits (85), Expect = 0.005
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -2
Query: 658 GFPTIFWKPKDSSKKPQRYNGGRALEDFIKYVSEQATSELKGWD 527
GFPTI++ P +P +Y+G R LED K++++ + D
Sbjct: 573 GFPTIYFAPAGKKSEPIKYSGNRDLEDLKKFMTKHGVKSFQKKD 616
>Z77657-7|CAH60768.1| 320|Caenorhabditis elegans Hypothetical
protein F08H9.12 protein.
Length = 320
Score = 31.9 bits (69), Expect = 0.41
Identities = 30/125 (24%), Positives = 48/125 (38%), Gaps = 2/125 (1%)
Frame = +2
Query: 50 LMXLIYHPQVEVYQYTTYDNTSD-FYKNVYYFLTKRSKML-SYICAPYTESNER*NCVYA 223
L LIY P + V + ++ ++ Y + Y F M + PY SN NC
Sbjct: 196 LTPLIYIPVMIVTRKNSHQHSQQHIYLHEYVFFQSCLVMFFKLVTLPYFLSNLEYNCAST 255
Query: 224 SVLFCKSSKVILDLLSVNMMVNECNITIARGTTMSLYPKNAFHICFPLDRYNTHKLRSHI 403
S+L + V+ L + + +CNI S + F + F + H S I
Sbjct: 256 SMLSMSLADVVTTPLIIQLSYLKCNIHDVICLFFSFDIQKYFRVVFGNVENSVHPNLSRI 315
Query: 404 SLFFT 418
+ T
Sbjct: 316 AFSIT 320
>Z37139-1|CAA85491.1| 485|Caenorhabditis elegans Hypothetical
protein C14B1.1 protein.
Length = 485
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -2
Query: 658 GFPTIFWKPKDSSKKPQRYNGGRALEDFIKYVSEQA 551
G+PTI + S KP +Y GGRA + +V +++
Sbjct: 97 GYPTILYF---KSGKPTKYTGGRATAQIVDWVKKKS 129
>U95074-1|AAB94647.1| 485|Caenorhabditis elegans protein disulphide
isomerase isoformI protein.
Length = 485
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -2
Query: 658 GFPTIFWKPKDSSKKPQRYNGGRALEDFIKYVSEQA 551
G+PTI + S KP +Y GGRA + +V +++
Sbjct: 97 GYPTILYF---KSGKPTKYTGGRATAQIVDWVKKKS 129
>AF039053-5|AAC25875.2| 293|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 23 protein.
Length = 293
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = +1
Query: 298 HYYCKRNDDVSVPKECFSYLLSLGQI*HT*TQKSYFIVFHITFILHTNTHADLSWKVLNH 477
+Y+C N +++ P+ C + S+ KS ++F +TF + L WKV
Sbjct: 146 YYFC--NFELTFPRNCLTIGCSINACSSRFWTKSKLVIFVLTFSFAALLSSKLLWKVFKK 203
Query: 478 NS 483
++
Sbjct: 204 DN 205
>AF016420-1|AAB65307.2| 310|Caenorhabditis elegans Serpentine
receptor, class sx protein11 protein.
Length = 310
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +1
Query: 391 QKSYFIVFHITFILHTNTHADLSWKVLN 474
Q S IVFH FILH ++ D S LN
Sbjct: 280 QTSSAIVFHTNFILHKSSTMDFSASRLN 307
>Z81114-1|CAB03285.1| 454|Caenorhabditis elegans Hypothetical
protein T04D3.1 protein.
Length = 454
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -1
Query: 410 TMKYDF*VYVCYICPRESRYEKHSLGTETSSF 315
T DF +YV YI YEK+ TS F
Sbjct: 206 TFCQDFQMYVLYIITSRGHYEKYIYNQSTSQF 237
>AL022270-1|CAB63432.1| 1270|Caenorhabditis elegans Hypothetical
protein C26G2.1 protein.
Length = 1270
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +2
Query: 65 YHPQVEVYQYTTYDNTSDFYKNVYYFL-TKRSKMLSYIC 178
YH + ++T D S KN+Y F+ ++ M Y C
Sbjct: 270 YHENKRLQSHSTLDTRSKEIKNIYSFIASQNDNMAEYEC 308
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,476,801
Number of Sequences: 27780
Number of extensions: 333195
Number of successful extensions: 1113
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1113
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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