Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10f10f
(544 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0) 171 3e-43
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) 123 1e-28
SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0) 119 2e-27
SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41) 99 3e-21
SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0) 94 6e-20
SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.) 87 9e-18
SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27) 85 5e-17
SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0) 83 1e-16
SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06) 79 2e-15
SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33) 77 7e-15
SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 2e-09
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 5e-09
SB_59094| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 9e-07
SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19) 47 1e-05
SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21) 45 5e-05
SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058) 43 1e-04
SB_5372| Best HMM Match : ER_lumen_recept (HMM E-Value=2.5e-19) 42 3e-04
SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19) 42 4e-04
SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0) 40 0.001
SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.028
SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32) 34 0.065
SB_25332| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.11
SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07) 32 0.26
SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05) 31 0.80
SB_48838| Best HMM Match : 7tm_1 (HMM E-Value=2.1e-12) 30 1.4
SB_36498| Best HMM Match : 7tm_1 (HMM E-Value=1.5e-14) 29 2.5
SB_56931| Best HMM Match : AFP (HMM E-Value=0.0013) 29 3.2
SB_48032| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_45044| Best HMM Match : Thioredoxin (HMM E-Value=1.1) 28 4.3
SB_38688| Best HMM Match : TP901-1_ORF40 (HMM E-Value=1.7) 28 4.3
SB_37088| Best HMM Match : AFP (HMM E-Value=2.2) 28 4.3
SB_24409| Best HMM Match : 7tm_1 (HMM E-Value=6.2e-14) 28 4.3
SB_30246| Best HMM Match : IspA (HMM E-Value=0.39) 28 4.3
SB_26040| Best HMM Match : AFP (HMM E-Value=5.5) 28 4.3
SB_6887| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.3
SB_35412| Best HMM Match : Sushi (HMM E-Value=2.4) 28 5.7
SB_2629| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_7148| Best HMM Match : MoCF_biosynth (HMM E-Value=3.6e-26) 28 5.7
SB_50601| Best HMM Match : Peptidase_M10 (HMM E-Value=0) 27 7.5
SB_1241| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.5
SB_9926| Best HMM Match : DPPIV_N (HMM E-Value=0) 27 9.9
SB_4456| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_41915| Best HMM Match : F5_F8_type_C (HMM E-Value=9.1e-13) 27 9.9
>SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 1056
Score = 171 bits (416), Expect = 3e-43
Identities = 74/128 (57%), Positives = 96/128 (75%)
Frame = +3
Query: 132 IIYLCKAAEEDVLDLTDSDFSAXLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDV 311
++++ DVLDL DS+F + ++ D LV F+APWCGHCKRL PEY AA LK +
Sbjct: 529 LLFVGSTLSSDVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLAPEYETAAEALKKND 588
Query: 312 PPVALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGP 491
PPV LAKVDCTE GK TC ++ VSGYPTLKIFR GE+S +Y+GPR+S+GI++YM+ Q GP
Sbjct: 589 PPVPLAKVDCTEAGKDTCSKYGVSGYPTLKIFRNGEMSKDYDGPRDSSGIIRYMKKQAGP 648
Query: 492 SSKELLTV 515
SS E+ +V
Sbjct: 649 SSVEIKSV 656
Score = 52.0 bits (119), Expect = 3e-07
Identities = 26/61 (42%), Positives = 34/61 (55%)
Frame = +3
Query: 222 LVMFYAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTCEQFSVSGYPTLK 401
L+ FYAPWCGHCK L+P+Y L+ DV + +AK+D T FSV G +
Sbjct: 884 LIEFYAPWCGHCKSLEPKYNELGEKLQ-DVKDIVIAKMDAT--ANDAPPNFSVQGIIIIS 940
Query: 402 I 404
I
Sbjct: 941 I 941
Score = 50.4 bits (115), Expect = 9e-07
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Frame = +3
Query: 333 VDCTEGGKSTCE-QFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSSKEL 506
+DC G++TC +F + +PTLK+FR G+ +Y GP+++ + Y+ Q+G K L
Sbjct: 434 MDCFGAGRATCYYRFGIHQWPTLKLFRYGQPWGDYTGPQDTASLESYIHDQLGDGKKRL 492
>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 123 bits (296), Expect = 1e-28
Identities = 60/115 (52%), Positives = 75/115 (65%)
Frame = +3
Query: 156 EEDVLDLTDSDFSAXLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKV 335
E+DV L +F + +++ LV FYAPWCGHCK L PEYA AA +K + PPV AK+
Sbjct: 60 EDDVSVLNSKNFDRVIEENNIILVEFYAPWCGHCKSLAPEYAKAAKKMKLNDPPVPFAKM 119
Query: 336 DCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSSK 500
D T ++F VSGYPTLKIFRKG EY GPRE +GIV+YM+ Q P+ K
Sbjct: 120 DATV-ASDIAQRFDVSGYPTLKIFRKG-TPYEYEGPREESGIVEYMKKQSDPNWK 172
Score = 116 bits (280), Expect = 9e-27
Identities = 59/122 (48%), Positives = 79/122 (64%), Gaps = 3/122 (2%)
Frame = +3
Query: 168 LDLTDSDFSAXLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTE 347
L LT +F+ +++ LV F+APWCGHCK+L PEY AA L+ PP+ LA VD T
Sbjct: 179 LTLTKENFTEVVNRESLMLVEFFAPWCGHCKQLAPEYEKAAQELQKHDPPIPLAIVDATI 238
Query: 348 GGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSSK---ELLTVX 518
+ +++ V GYPTLK+FRKG+ ++EY G R+ GI YMR+QVGPSS+ L V
Sbjct: 239 ESE-LAQKYEVQGYPTLKVFRKGK-ATEYKGQRDQYGIASYMRSQVGPSSRILSSLKAVQ 296
Query: 519 DF 524
DF
Sbjct: 297 DF 298
Score = 41.9 bits (94), Expect = 3e-04
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Frame = +3
Query: 222 LVMFYAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTCEQFSVSGYPTLK 401
L+ FYAPWCG L+P + + D + +AK+D T ++V G+PT+
Sbjct: 547 LIEFYAPWCGIA--LEPTFKKLGKHFRND-KNIVIAKIDAT--ANDVPSTYAVEGFPTIY 601
Query: 402 IFRKGELSS--EYNGPRESNGIVKYMRAQVGPS-SKE 503
+ + +++G RE ++K++ + S SKE
Sbjct: 602 FATSKDKKNPIKFDGGRELKDLIKFVEEKATVSLSKE 638
>SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 536
Score = 119 bits (286), Expect = 2e-27
Identities = 64/136 (47%), Positives = 85/136 (62%), Gaps = 4/136 (2%)
Frame = +3
Query: 117 VLLLGIIYLCKAAE----EDVLDLTDSDFSAXLSQHDTALVMFYAPWCGHCKRLKPEYAV 284
VLLL ++ L + E EDVL LT+ +F ++ + LV FYAPWCGHCK L PEYA
Sbjct: 6 VLLLALVSLAYSEEIKEEEDVLVLTEKNFDEAVAANKHVLVEFYAPWCGHCKALAPEYAK 65
Query: 285 AAGLLKTDVPPVALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIV 464
AAG LK++ + LAKVD T K E+F V GYPT+K F+ G+ SEY G R + IV
Sbjct: 66 AAGQLKSEKSEIKLAKVDATAETK-LGEKFQVQGYPTIKFFKDGK-PSEYAGGRTAPEIV 123
Query: 465 KYMRAQVGPSSKELLT 512
++ + GP +K+L T
Sbjct: 124 SWLNKKTGPPAKDLAT 139
Score = 60.1 bits (139), Expect = 1e-09
Identities = 32/85 (37%), Positives = 46/85 (54%)
Frame = +3
Query: 225 VMFYAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTCEQFSVSGYPTLKI 404
V FYAPWCGHCK+L P + K D + +AK+D T + E V +PT+K
Sbjct: 407 VEFYAPWCGHCKQLAPIWDQLGEKYK-DHADIVVAKMDST---ANEVEGVKVHSFPTIKY 462
Query: 405 FRKGELSSEYNGPRESNGIVKYMRA 479
F K + +YNG R + VK++ +
Sbjct: 463 FPKEGEAVDYNGGRTLDDFVKFLES 487
>SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41)
Length = 271
Score = 98.7 bits (235), Expect = 3e-21
Identities = 52/119 (43%), Positives = 69/119 (57%), Gaps = 3/119 (2%)
Frame = +3
Query: 150 AAEED---VLDLTDSDFSAXLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDVPPV 320
+AEED V L SDF L+ + LVMFYAPWCGHCK KP+Y AA K D P
Sbjct: 141 SAEEDSSLVKQLDGSDFWGYLNNTEHVLVMFYAPWCGHCKNAKPKYEKAAETFK-DQPNR 199
Query: 321 ALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSS 497
AK+DCT+ G C++ V+GYPTL+ + G+ EY+G R + ++ +M P S
Sbjct: 200 VFAKLDCTKFG-DVCDKEEVNGYPTLRYYLYGKFVVEYDGDRVTEDLISFMEEPPLPLS 257
Score = 80.6 bits (190), Expect = 8e-16
Identities = 37/106 (34%), Positives = 61/106 (57%)
Frame = +3
Query: 156 EEDVLDLTDSDFSAXLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKV 335
+ V+ LTD + H+ LVM++APWCGHC +KP Y AA +L + LA V
Sbjct: 49 DSKVVFLTDESHDEFIKSHENVLVMYFAPWCGHCNEMKPNYYKAAQVLHDEDANCNLAAV 108
Query: 336 DCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYM 473
DCT+ K ++ +++GYPT+K++ K +++ E + +VK +
Sbjct: 109 DCTK-HKDVAKKVALAGYPTVKLY-KASNTAKAASAEEDSSLVKQL 152
Score = 41.1 bits (92), Expect = 6e-04
Identities = 23/44 (52%), Positives = 27/44 (61%)
Frame = +3
Query: 264 LKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTCEQFSVSGYPT 395
+KP + AA L DV ALA VDCTE K+TC Q + GYPT
Sbjct: 1 MKPVFEKAAKQLGKDVKG-ALAAVDCTES-KNTCNQRDIKGYPT 42
>SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 295
Score = 94.3 bits (224), Expect = 6e-20
Identities = 50/130 (38%), Positives = 72/130 (55%), Gaps = 1/130 (0%)
Frame = +3
Query: 102 GSLKFVLLLGIIYLCKAAEEDVLDLTDSDFSAXLSQHDTALVMFYAPWCGHCKRLKPEYA 281
G++ F L L + + + V+DLT +F ++ ALV FYAPWCGHCK+L P Y
Sbjct: 4 GTVLFKLFL-LFSISSLTQGKVIDLTKDNFDEVVNGEKFALVEFYAPWCGHCKQLAPTYE 62
Query: 282 VAAGLLKTDVPPVALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELS-SEYNGPRESNG 458
G T V +AKVD +G + +F V G+PT+K F KG + EYNG R+ N
Sbjct: 63 -QLGEAYTQSSDVIIAKVD-ADGDRDLGSRFDVKGFPTIKYFPKGSTTPEEYNGGRDIND 120
Query: 459 IVKYMRAQVG 488
+K++ + G
Sbjct: 121 FIKFIEEKTG 130
>SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 87.0 bits (206), Expect = 9e-18
Identities = 42/114 (36%), Positives = 62/114 (54%), Gaps = 1/114 (0%)
Frame = +3
Query: 165 VLDLTDSDFSAXLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCT 344
V DL +F + + D LV FYAPWC HC+ L P+ AA L AKVDCT
Sbjct: 22 VYDLNAQNFDQMIREKDIMLVDFYAPWCHHCQELLPQLEGAANALAAK-GLFQFAKVDCT 80
Query: 345 E-GGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSSKE 503
+ K C+ F + GYP++K+F+ G+ + +Y G R +V YM + +S++
Sbjct: 81 DPRSKVLCDNFKIEGYPSVKLFKFGKYAGDYIGQRTDAALVNYMESVTSTASQQ 134
>SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27)
Length = 472
Score = 84.6 bits (200), Expect = 5e-17
Identities = 42/108 (38%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Frame = +3
Query: 156 EEDVLDLTDSDFSAXLSQHDTALVMFYAPWCGHCKRLKPEYA-VAAGLLKTDVPPVALAK 332
E +L+L DS+F + +H LV FYAPWC HCK++ P+Y VA LL V LAK
Sbjct: 133 EPTLLELDDSNFEPAVQKHKFVLVDFYAPWCFHCKKMAPDYKDVAKELLILSHNSVRLAK 192
Query: 333 VDCTEGG---KSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVK 467
VDC+ K TC++++V PT+ +F G+ E+ G + +K
Sbjct: 193 VDCSANNMATKKTCKKYNVKFLPTIYLFHDGKFVEEFEGNNRNKKSIK 240
Score = 55.2 bits (127), Expect = 3e-08
Identities = 25/61 (40%), Positives = 37/61 (60%)
Frame = +3
Query: 153 AEEDVLDLTDSDFSAXLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAK 332
A VL+L D +F+ + +++ LV FYAPWC C+RL P + AA L+ + P + AK
Sbjct: 49 ASPAVLNLNDQNFNETIKKNEYVLVDFYAPWCSDCQRLSPLFDTAALQLRDNNPSLRFAK 108
Query: 333 V 335
V
Sbjct: 109 V 109
>SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 362
Score = 83.0 bits (196), Expect = 1e-16
Identities = 48/110 (43%), Positives = 67/110 (60%), Gaps = 5/110 (4%)
Frame = +3
Query: 156 EEDVLDLTDSDFSAX-LSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAK 332
+EDV++LTD++F L+ D LV F+APWCGHC+RL PE+A AA LK V AL
Sbjct: 78 KEDVVELTDTNFEKEVLNSKDLWLVEFFAPWCGHCQRLAPEWAKAATELKGKVKVGAL-- 135
Query: 333 VDCTEGGKSTCEQFSVSGYPTLKIFRKGELSS----EYNGPRESNGIVKY 470
D T T ++ V GYPT+K+F G +S +Y G R ++ I++Y
Sbjct: 136 -DATV-HTVTASRYQVQGYPTIKVFAAGIKNSHSVEDYQGGRTASDIIQY 183
Score = 32.7 bits (71), Expect = 0.20
Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +3
Query: 372 FSVSGYPTLKIFRKGELS-SEYNGPRESNGIV 464
+++ G+PT+KIF + S +YNG R + GIV
Sbjct: 11 YNIRGFPTIKIFGANKNSPQDYNGQRTAQGIV 42
>SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06)
Length = 70
Score = 79.4 bits (187), Expect = 2e-15
Identities = 35/67 (52%), Positives = 45/67 (67%)
Frame = +3
Query: 132 IIYLCKAAEEDVLDLTDSDFSAXLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDV 311
++++ DVLDL DS+F + ++ D LV F+APWCGHCKRL PEY AA LK +
Sbjct: 4 LLFVGSTLSSDVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLAPEYETAAEALKKND 63
Query: 312 PPVALAK 332
PPV LAK
Sbjct: 64 PPVPLAK 70
>SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33)
Length = 386
Score = 77.4 bits (182), Expect = 7e-15
Identities = 37/78 (47%), Positives = 49/78 (62%)
Frame = +3
Query: 162 DVLDLTDSDFSAXLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDC 341
+V+ L D F ++++ + LVMFYAPWCGHCK +KPEY AA LK P LA VD
Sbjct: 83 EVVHLRDDMFDDFVAKNPSVLVMFYAPWCGHCKAMKPEYVDAAQTLKEQEIPGVLAAVDA 142
Query: 342 TEGGKSTCEQFSVSGYPT 395
T+ + ++F V GYPT
Sbjct: 143 TKEA-ALGKRFKVEGYPT 159
Score = 62.1 bits (144), Expect = 3e-10
Identities = 42/124 (33%), Positives = 59/124 (47%), Gaps = 20/124 (16%)
Frame = +3
Query: 162 DVLDLTDSDFSAXLSQHDTALVMFYAPWCGHCKRLKPEYAVAA-----------GLLKTD 308
+V L+D+ F + + + LVMFYAPWCGHCK+ KPE AA L D
Sbjct: 196 EVYHLSDTTFKSFVKKKKHVLVMFYAPWCGHCKKAKPELMSAAKHHKDKNKRALSLRDFD 255
Query: 309 VPP---------VALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGI 461
+A A VDCT+ + C+QF V GY F G+ +Y RE+
Sbjct: 256 FSNDTLCNRRRLIAYAAVDCTK-EMAVCQQFGVEGY-----FNYGKNDFKYTSGREAKDF 309
Query: 462 VKYM 473
+++M
Sbjct: 310 IQFM 313
Score = 34.7 bits (76), Expect = 0.049
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +3
Query: 222 LVMFYAPWCGHCKRLKPEYAVAA 290
+++ Y CG+CKR KPE+A AA
Sbjct: 3 VIVLYIAGCGYCKRFKPEFAAAA 25
Score = 28.3 bits (60), Expect = 4.3
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 162 DVLDLTDSDFSAXLSQHDTALVMFYAP 242
+V LT F L D+ LVMFYAP
Sbjct: 335 NVQHLTQDTFDEALKTFDSILVMFYAP 361
>SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 59.3 bits (137), Expect = 2e-09
Identities = 35/105 (33%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Frame = +3
Query: 105 SLKFVLLLGIIYLCKAAEED-VLDLTDSDFSAXLSQHDTALVMFYAPWCGHCKRLKPEYA 281
++ FV+ L +I A +E+ + +LTD DF L + LV FYAPWC C L+P+Y
Sbjct: 3 AIAFVVALCVIAPSYARKENPIFELTDQDFDNFLKDKEVMLVDFYAPWCSDCDNLRPKYE 62
Query: 282 VAAGLLKTDVPPVALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKG 416
AA L + V + T ++TC V + TL + G
Sbjct: 63 KAARDLAKEHKFVMAKALMNTNSTQTTCLPMGVHYWRTLLAYTIG 107
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 58.0 bits (134), Expect = 5e-09
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Frame = +3
Query: 189 FSAXLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTCE 368
F+ L+ D +V FYAPWCG C R P+Y A +LK V AKV+C E C
Sbjct: 444 FTDVLASEDAWVVDFYAPWCGPCMRFAPKYEQLAKMLK---GKVRAAKVNC-EQDYGLCS 499
Query: 369 QFSVSGYPTLKIF----RKGELSSEYNGPRESNGIV 464
+ ++ YPT++++ R+G ++ NG + N V
Sbjct: 500 EANIHSYPTVRLYLGSTRQG-MTQSINGDLQLNSQV 534
Score = 54.0 bits (124), Expect = 8e-08
Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
Frame = +3
Query: 135 IYLCKAAEEDVLDLTDSDF-SAXLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDV 311
++ ++ +V L DF S+ S V F+APWC C RL PEY AA
Sbjct: 276 LFAKESVSSNVHALGPEDFPSSVTSPSRPFFVDFFAPWCPPCMRLLPEYRKAARSFVG-- 333
Query: 312 PPVALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQ 482
PV VDCT + C Q+++ YPT ++ + ++ G + I++++ +
Sbjct: 334 KPVGFGTVDCTVHSQ-LCHQYNIRSYPTTILYNNSQ-PHQFIGHHNALDIIEFVEVE 388
>SB_59094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 50.4 bits (115), Expect = 9e-07
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Frame = +3
Query: 333 VDCTEGGKSTCE-QFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSSKEL 506
+DC G++TC +F + +PTLK+FR G+ +Y GP+++ + Y+ Q+G K L
Sbjct: 237 MDCFGAGRATCYYRFGIHQWPTLKLFRYGQPWGDYTGPQDTASLESYIHDQLGDGKKRL 295
>SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19)
Length = 975
Score = 46.8 bits (106), Expect = 1e-05
Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 4/103 (3%)
Frame = +3
Query: 177 TDSDFSAXLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGK 356
TDS ++ L++FY PWCG C P A + D+ V++ ++D +
Sbjct: 524 TDSFDDIVINNDQDVLLVFYTPWCGMCINFAPVLLAVARFFQ-DISQVSVTRIDADQNDL 582
Query: 357 STCEQFSVSGYPTLKIFRKGELSSEY----NGPRESNGIVKYM 473
+VS YP++ +F G S N PR + +++++
Sbjct: 583 PW--NLTVSSYPSIILFPAGRKDSSIAFPSNTPRTATRLIEFI 623
>SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21)
Length = 186
Score = 44.8 bits (101), Expect = 5e-05
Identities = 26/83 (31%), Positives = 42/83 (50%)
Frame = +3
Query: 225 VMFYAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTCEQFSVSGYPTLKI 404
V FYAPWC HC +L P + A K D + ++K++ GYPTL +
Sbjct: 111 VKFYAPWCIHCIKLAPIWERLAEDFK-DNADITISKIN---------------GYPTLML 154
Query: 405 FRKGELSSEYNGPRESNGIVKYM 473
F+ G EY+G R+ + + +++
Sbjct: 155 FKDGVQKKEYSGNRDLDSLYRFI 177
Score = 33.9 bits (74), Expect = 0.086
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = +3
Query: 318 VALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRES 452
+ +AKVDCT + C + ++ YPT+K++ G++ Y G R +
Sbjct: 19 LTIAKVDCTSD-VNLCVKQNIRAYPTMKLYYDGDI-KRYTGRRNA 61
>SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058)
Length = 664
Score = 43.2 bits (97), Expect = 1e-04
Identities = 25/84 (29%), Positives = 40/84 (47%)
Frame = +3
Query: 192 SAXLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTCEQ 371
S+ L V FYAPWCG +R E+ +AA LL V +A ++C G S E+
Sbjct: 446 SSFLHNSPLNFVFFYAPWCGQSRRAVEEFNIAASLLYGKVTFIA---INCWAG--SCREK 500
Query: 372 FSVSGYPTLKIFRKGELSSEYNGP 443
+++ +P ++ +Y P
Sbjct: 501 YTLDSFPKFFVYHSKFPGLQYPPP 524
>SB_5372| Best HMM Match : ER_lumen_recept (HMM E-Value=2.5e-19)
Length = 229
Score = 41.9 bits (94), Expect = 3e-04
Identities = 19/50 (38%), Positives = 32/50 (64%)
Frame = +3
Query: 318 VALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVK 467
V LA+V+C + C+ +++ YPT+K+FRKG Y GP +++ +VK
Sbjct: 10 VRLARVNCFDW-TDVCQDNNITVYPTIKLFRKGADELIYGGPLDADHLVK 58
>SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19)
Length = 335
Score = 41.5 bits (93), Expect = 4e-04
Identities = 27/131 (20%), Positives = 60/131 (45%), Gaps = 2/131 (1%)
Frame = +3
Query: 96 MFGSLKFVLLLGIIYLCKAAE-EDVLDLTDSDFSAXLSQHDTALVMFYAPWCGHCKRLKP 272
+F + F+L+ I+ + + +++ T+ + + + FYAPW HC+R+
Sbjct: 4 LFITNTFLLISLTIFTSTSVHCKKIVEFTNENVDEYVDGSKFVFIFFYAPWDDHCQRILQ 63
Query: 273 EYAVAAGLLKTDVPPVALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSE-YNGPRE 449
+ A D + + K + E K ++ + YP + F KG + E Y+G +
Sbjct: 64 IFDQVADEF-ADRDDIVVGKSNAYEDVK-IATRYWIDRYPMFRYFIKGSTTEETYDGGFK 121
Query: 450 SNGIVKYMRAQ 482
+ ++++ A+
Sbjct: 122 PDDFIRFIAAR 132
>SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0)
Length = 308
Score = 40.3 bits (90), Expect = 0.001
Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Frame = +3
Query: 165 VLDLTDSDFSAXLSQHDTALVM--FYAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVD 338
VL+L DS F+A L+ T LV+ F A WCG CK + P Y +GL + V L K+D
Sbjct: 11 VLEL-DSQFTAELTNAGTKLVVADFTASWCGPCKSIAPVY---SGLSEKYKQAVFL-KID 65
Query: 339 CTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNG 440
+ +Q V+ PT + F+ E G
Sbjct: 66 VDVCQELAAKQ-GVTAMPTFQFFKNKVKVDEVRG 98
>SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 35.5 bits (78), Expect = 0.028
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = +3
Query: 183 SDFSAXLSQHDTALVM--FYAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTE 347
++F++ ++ LV+ FYA WCG C+++KP++ A + V AK+D E
Sbjct: 19 AEFNSVINNTKDKLVVIDFYAEWCGPCRQIKPKFKKMA---LEEFKDVFFAKIDVDE 72
>SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32)
Length = 456
Score = 34.3 bits (75), Expect = 0.065
Identities = 29/104 (27%), Positives = 41/104 (39%), Gaps = 4/104 (3%)
Frame = +3
Query: 180 DSDFSAXLSQHDTALVM--FYAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGG 353
DS FS + + + LV+ F A WCG CK + P + L V KVD +
Sbjct: 16 DSFFSVEIERAGSRLVVIDFTATWCGPCKSIAPVFT----NLSMKFMDVVFLKVD-VDQC 70
Query: 354 KSTCEQFSVSGYPTLKIFRKGELSSEYNG--PRESNGIVKYMRA 479
+ T E + PT + E G P +K +RA
Sbjct: 71 QLTAESCGIRAMPTFHFYHNKAKIDELRGADPGALENKIKELRA 114
>SB_25332| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 41
Score = 33.5 bits (73), Expect = 0.11
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +3
Query: 378 VSGYPTLKIFRKGELSSEYNGPRESNGIVKYM 473
++GYPTL +F+ G EY+G R+ + + +++
Sbjct: 1 INGYPTLMLFKDGVQKKEYSGNRDLDSLYRFI 32
>SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07)
Length = 438
Score = 32.3 bits (70), Expect = 0.26
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +3
Query: 186 DFSAXLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVD 338
+F L ++ A + F A WCG C+ + P++ A K V AKVD
Sbjct: 3 EFDKFLKDNEVAAIDFTATWCGPCRMIGPKFEEMAKEFK----GVKCAKVD 49
>SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05)
Length = 215
Score = 30.7 bits (66), Expect = 0.80
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 153 AEEDVLDLTDSDFSAXLSQHDTALVMFYAPWCGHCKRL 266
A ++ +TD D S + A+V F+APW HC ++
Sbjct: 2 AIQEANTVTDFDRILSSSSNVLAVVHFFAPWAPHCNQM 39
>SB_48838| Best HMM Match : 7tm_1 (HMM E-Value=2.1e-12)
Length = 556
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 442 GPLYSEESSPFLNIFSVGYPDTEN 371
G L + +P N ++ GYPDTEN
Sbjct: 71 GILTQDNQTPLNNFYNTGYPDTEN 94
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 442 GPLYSEESSPFLNIFSVGYPDTEN 371
G L + +P N ++ GYPDTEN
Sbjct: 110 GILTQDNQTPLNNFYNTGYPDTEN 133
Score = 28.3 bits (60), Expect = 4.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 442 GPLYSEESSPFLNIFSVGYPDTEN 371
G L + +P N ++ GYPDT+N
Sbjct: 149 GILSQDTQTPLNNFYNTGYPDTQN 172
Score = 27.1 bits (57), Expect = 9.9
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -1
Query: 418 SPFLNIFSVGYPDTEN 371
+P N ++ GYPDTEN
Sbjct: 40 TPLNNFYNTGYPDTEN 55
>SB_36498| Best HMM Match : 7tm_1 (HMM E-Value=1.5e-14)
Length = 596
Score = 29.1 bits (62), Expect = 2.5
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -1
Query: 442 GPLYSEESSPFLNIFSVGYPDTENCSQVLL 353
G L + +P N ++ GYPDT+N + V L
Sbjct: 154 GILSQDTQTPLNNFYNTGYPDTQNTTCVPL 183
>SB_56931| Best HMM Match : AFP (HMM E-Value=0.0013)
Length = 383
Score = 28.7 bits (61), Expect = 3.2
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -1
Query: 469 YLTMPLDSLGPLYSEESSPFLNIFSVGYPDTEN 371
Y + G L + +P N ++ GYPDT+N
Sbjct: 148 YFCFTSRTTGILSQDTQTPLNNFYNTGYPDTQN 180
Score = 28.3 bits (60), Expect = 4.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 442 GPLYSEESSPFLNIFSVGYPDTEN 371
G L + +P N ++ GYPDT+N
Sbjct: 196 GILSQDTQTPLNNFYNTGYPDTQN 219
Score = 27.9 bits (59), Expect = 5.7
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -1
Query: 448 SLGPLYSEESSPFLNIFSVGYPDTEN 371
++G L + +P LN ++ GYPDT+N
Sbjct: 267 TIGILSQDTQTP-LNFYNTGYPDTQN 291
Score = 27.5 bits (58), Expect = 7.5
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = -1
Query: 436 LYSEESSPFLNIFSVGYPDTEN 371
+ S+++ LN ++ GYPDT+N
Sbjct: 346 ILSQDTQTPLNFYNTGYPDTQN 367
>SB_48032| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 28.7 bits (61), Expect = 3.2
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 442 GPLYSEESSPFLNIFSVGYPDTEN 371
G L + +P N ++ GYPDT+N
Sbjct: 39 GILSQDAQTPLSNFYNTGYPDTQN 62
>SB_45044| Best HMM Match : Thioredoxin (HMM E-Value=1.1)
Length = 213
Score = 28.3 bits (60), Expect = 4.3
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +3
Query: 222 LVMFYAPWCGHCKRLKPEYA 281
+++ WCG CK L+P++A
Sbjct: 1 MILITKNWCGACKALRPKFA 20
>SB_38688| Best HMM Match : TP901-1_ORF40 (HMM E-Value=1.7)
Length = 576
Score = 28.3 bits (60), Expect = 4.3
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +3
Query: 165 VLDLTDSDFSAXLSQHDTALVMFYAPWCGHCK 260
+ D+ D+ S SQ ++++ +AP C CK
Sbjct: 344 IRDVNDTQLSGTTSQDQYSVLLVHAPCCNACK 375
>SB_37088| Best HMM Match : AFP (HMM E-Value=2.2)
Length = 227
Score = 28.3 bits (60), Expect = 4.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 442 GPLYSEESSPFLNIFSVGYPDTEN 371
G L + +P N ++ GYPDT+N
Sbjct: 34 GILSQDTQTPLNNFYNTGYPDTQN 57
Score = 28.3 bits (60), Expect = 4.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 442 GPLYSEESSPFLNIFSVGYPDTEN 371
G L + +P N ++ GYPDT+N
Sbjct: 112 GILSQDTQTPLNNFYNTGYPDTQN 135
Score = 27.9 bits (59), Expect = 5.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 442 GPLYSEESSPFLNIFSVGYPDTEN 371
G L + +P N ++ GYPDT+N
Sbjct: 73 GILSQDTQTPVNNFYNTGYPDTQN 96
Score = 27.5 bits (58), Expect = 7.5
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = -1
Query: 436 LYSEESSPFLNIFSVGYPDTEN 371
+ S+++ LN ++ GYPDT+N
Sbjct: 152 ILSQDTQTPLNFYNTGYPDTQN 173
>SB_24409| Best HMM Match : 7tm_1 (HMM E-Value=6.2e-14)
Length = 439
Score = 28.3 bits (60), Expect = 4.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 442 GPLYSEESSPFLNIFSVGYPDTEN 371
G L + +P N ++ GYPDT+N
Sbjct: 75 GILSQDTQTPLNNFYNTGYPDTQN 98
>SB_30246| Best HMM Match : IspA (HMM E-Value=0.39)
Length = 1502
Score = 28.3 bits (60), Expect = 4.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 442 GPLYSEESSPFLNIFSVGYPDTEN 371
G L + +P N ++ GYPDT+N
Sbjct: 132 GILSQDTQTPLNNFYNTGYPDTQN 155
>SB_26040| Best HMM Match : AFP (HMM E-Value=5.5)
Length = 207
Score = 28.3 bits (60), Expect = 4.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 442 GPLYSEESSPFLNIFSVGYPDTEN 371
G L + +P N ++ GYPDT+N
Sbjct: 108 GILSQDTQTPLNNFYNTGYPDTQN 131
Score = 28.3 bits (60), Expect = 4.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 442 GPLYSEESSPFLNIFSVGYPDTEN 371
G L + +P N ++ GYPDT+N
Sbjct: 147 GILSQDTQTPLNNFYNTGYPDTQN 170
>SB_6887| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 875
Score = 28.3 bits (60), Expect = 4.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 442 GPLYSEESSPFLNIFSVGYPDTEN 371
G L + +P N ++ GYPDT+N
Sbjct: 340 GILSQDTQTPLNNFYNTGYPDTQN 363
Score = 28.3 bits (60), Expect = 4.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 442 GPLYSEESSPFLNIFSVGYPDTEN 371
G L + +P N ++ GYPDT+N
Sbjct: 418 GILSQDTQTPLNNFYNTGYPDTQN 441
Score = 28.3 bits (60), Expect = 4.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 442 GPLYSEESSPFLNIFSVGYPDTEN 371
G L + +P N ++ GYPDT+N
Sbjct: 456 GILSQDTQTPLNNFYNTGYPDTQN 479
>SB_35412| Best HMM Match : Sushi (HMM E-Value=2.4)
Length = 99
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 270 PEYAVAAGLLKTDVPPVALAKVDCTEG 350
P A+A+ TDVP + LA V C +G
Sbjct: 17 PHIALASVTCVTDVPHITLASVTCVKG 43
>SB_2629| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 538
Score = 27.9 bits (59), Expect = 5.7
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 246 CGHCKRLKPEYAVAAGLLKTDVP 314
C H R + EYA+ G L TD+P
Sbjct: 349 CHHSLRTQYEYAIILGALSTDMP 371
>SB_7148| Best HMM Match : MoCF_biosynth (HMM E-Value=3.6e-26)
Length = 501
Score = 27.9 bits (59), Expect = 5.7
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +3
Query: 306 DVPPV--ALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRA 479
DV PV LA D + G ++V +LK+FR EL +NG ++ ++ M A
Sbjct: 279 DVSPVYPLLAPTDTSSLGACLKGAWAVI-QESLKLFRLDELCISFNGGKDCTVLLYIMYA 337
Query: 480 QVGPSSKEL 506
V S E+
Sbjct: 338 AVAQSMAEV 346
>SB_50601| Best HMM Match : Peptidase_M10 (HMM E-Value=0)
Length = 515
Score = 27.5 bits (58), Expect = 7.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 442 GPLYSEESSPFLNIFSVGYPDTEN 371
G L + +P + ++ GYPDTEN
Sbjct: 458 GILSQDTQTPLNHFYNTGYPDTEN 481
>SB_1241| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 27.5 bits (58), Expect = 7.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -1
Query: 439 PLYSEESSPFLNIFSVGYPDTEN 371
PL ++ LN ++ GYPDT+N
Sbjct: 53 PLVRVDTQTPLNFYNTGYPDTQN 75
>SB_9926| Best HMM Match : DPPIV_N (HMM E-Value=0)
Length = 1066
Score = 27.1 bits (57), Expect = 9.9
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +3
Query: 180 DSDFSAXLSQHDTALVMFYAPWCGHCKRLKP-EYAVAAGLLKTDVPPVALAKVDCT 344
DS + A + +DT + + PW G K + P + +A T P V + +D T
Sbjct: 328 DSKYLAYMQFNDTRVKDYVYPWYGSAKNIYPSQRKIAYPKPGTPNPTVRVKVIDLT 383
>SB_4456| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 673
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -3
Query: 488 SNLGTHVLDNAIRLPWSIVLGRKLSFSEYFQCR 390
+NLGT ++DN L WS L LS +Y C+
Sbjct: 26 TNLGTSIIDNRTILKWSPSLSVGLSL-QYRVCK 57
>SB_41915| Best HMM Match : F5_F8_type_C (HMM E-Value=9.1e-13)
Length = 317
Score = 27.1 bits (57), Expect = 9.9
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +3
Query: 393 TLKIFRKGELSSEYNGPRESNGIVKY 470
+LK +R+ + E+NG + NG+VK+
Sbjct: 258 SLKDYRESGVRREFNGNTDRNGVVKH 283
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,787,368
Number of Sequences: 59808
Number of extensions: 306722
Number of successful extensions: 888
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 871
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1239956166
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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